RNA–Protein interactions for RNA: ENST00000367538.1

SMG7-203, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG7, Length 328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-203ENST00000367538 GSKIPQ9P0R6 139 aa12.62□□□□□ -0.39
SMG7-203ENST00000367538 TMEM14CQ9P0S9 112 aa12.62□□□□□ -0.39
SMG7-203ENST00000367538 LY96Q9Y6Y9 160 aa12.62□□□□□ -0.39
SMG7-203ENST00000367538 L7N2F9 121 aa12.61□□□□□ -0.39
SMG7-203ENST00000367538 MBPP02686 304 aaPredicted RBP12.61□□□□□ -0.39
SMG7-203ENST00000367538 INPP1P49441 399 aa12.61□□□□□ -0.39
SMG7-203ENST00000367538 CRYBA4P53673 196 aa12.61□□□□□ -0.39
SMG7-203ENST00000367538 VAMP2P63027 116 aa12.61□□□□□ -0.39
SMG7-203ENST00000367538 NEGR1Q7Z3B1 354 aa12.61□□□□□ -0.39
SMG7-203ENST00000367538 MITD1Q8WV92 249 aa12.61□□□□□ -0.39
SMG7-203ENST00000367538 FLVCR2Q9UPI3 526 aa12.61□□□□□ -0.39
SMG7-203ENST00000367538 KLF12Q9Y4X4 402 aa12.61□□□□□ -0.39
SMG7-203ENST00000367538 FLG2Q5D862 2391 aaPredicted RBP12.61□□□□□ -0.39
SMG7-203ENST00000367538 TRAV5A0A0B4J249 113 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 M0R3E3 92 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 GPX1P07203 203 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 HIST1H1EP10412 219 aaKnown RBP12.6□□□□□ -0.39
SMG7-203ENST00000367538 RPL29P47914 159 aaKnown RBP12.6□□□□□ -0.39
SMG7-203ENST00000367538 KRTAP10-1P60331 282 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 CD300CQ08708 224 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 BTN1A1Q13410 526 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 CNPY1Q3B7I2 92 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 SPANXN2Q5MJ10 180 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 MIC13Q5XKP0 118 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 C9orf47Q6ZRZ4 202 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 UQCC1Q9NVA1 299 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 MSRB1Q9NZV6 116 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 HHLA3Q9XRX5 114 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 WDR83OSQ9Y284 106 aa12.6□□□□□ -0.39
SMG7-203ENST00000367538 VPS13BQ7Z7G8 4022 aa12.59□□□□□ -0.39
SMG7-203ENST00000367538 RGS13O14921 159 aa12.59□□□□□ -0.39
SMG7-203ENST00000367538 DNAH10OSP0CZ25 163 aa12.59□□□□□ -0.39
SMG7-203ENST00000367538 RNASE4P34096 147 aaKnown RBP12.59□□□□□ -0.39
SMG7-203ENST00000367538 FUSP35637 526 aaKnown RBP eCLIP12.59□□□□□ -0.393e-6■■■□□ 19.1
SMG7-203ENST00000367538 ERCC8Q13216 396 aa12.59□□□□□ -0.39
SMG7-203ENST00000367538 CHAC2Q8WUX2 184 aa12.59□□□□□ -0.39
SMG7-203ENST00000367538 ARPC5LQ9BPX5 153 aa12.59□□□□□ -0.39
SMG7-203ENST00000367538 SRRQ9GZT4 340 aa12.59□□□□□ -0.39
SMG7-203ENST00000367538 AGPAT4-IT1Q9H0P7 198 aa12.59□□□□□ -0.39
SMG7-203ENST00000367538 C20orf85Q9H1P6 137 aa12.59□□□□□ -0.39
SMG7-203ENST00000367538 TNFRSF18Q9Y5U5 241 aa12.59□□□□□ -0.39
SMG7-203ENST00000367538 EVI2AP22794 236 aa12.58□□□□□ -0.4
SMG7-203ENST00000367538 GCSHP23434 173 aa12.58□□□□□ -0.4
SMG7-203ENST00000367538 VWC2Q2TAL6 325 aa12.58□□□□□ -0.4
SMG7-203ENST00000367538 TRIQKQ629K1 86 aa12.58□□□□□ -0.4
SMG7-203ENST00000367538 AAMDCQ9H7C9 122 aa12.58□□□□□ -0.4
SMG7-203ENST00000367538 SLC39A9Q9NUM3 307 aa12.58□□□□□ -0.4
SMG7-203ENST00000367538 TIMM9Q9Y5J7 89 aa12.58□□□□□ -0.4
SMG7-203ENST00000367538 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
SMG7-203ENST00000367538 TRBV7-9A0A0J9YWB2 115 aa12.57□□□□□ -0.4
SMG7-203ENST00000367538 CENPXA8MT69 81 aa12.57□□□□□ -0.4
SMG7-203ENST00000367538 FAM229AH3BQW9 127 aa12.57□□□□□ -0.4
SMG7-203ENST00000367538 NDUFB4O95168 129 aa12.57□□□□□ -0.4
SMG7-203ENST00000367538 IGHV3-53P01767 116 aa12.57□□□□□ -0.4
SMG7-203ENST00000367538 SRIP30626 198 aa12.57□□□□□ -0.4
SMG7-203ENST00000367538 FHL2Q14192 279 aa12.57□□□□□ -0.4
SMG7-203ENST00000367538 ZNF846Q147U1 533 aa12.57□□□□□ -0.4
SMG7-203ENST00000367538 TMEM78Q5T7P6 136 aa12.57□□□□□ -0.4
SMG7-203ENST00000367538 C10orf126Q8N4M7 172 aa12.57□□□□□ -0.4
SMG7-203ENST00000367538 C8orf49Q96NF6 230 aa12.57□□□□□ -0.4
SMG7-203ENST00000367538 MRPL32Q9BYC8 188 aaKnown RBP12.57□□□□□ -0.4
SMG7-203ENST00000367538 MRPL16Q9NX20 251 aaKnown RBP12.57□□□□□ -0.4
SMG7-203ENST00000367538 SRRM2Q9UQ35 2752 aaKnown RBP12.56□□□□□ -0.4
SMG7-203ENST00000367538 BCAP31P51572 246 aa12.56□□□□□ -0.4
SMG7-203ENST00000367538 CAV2P51636 162 aa12.56□□□□□ -0.4
SMG7-203ENST00000367538 ZNF415Q09FC8 603 aa12.56□□□□□ -0.4
SMG7-203ENST00000367538 IQCF2Q8IXL9 164 aa12.56□□□□□ -0.4
SMG7-203ENST00000367538 ZFAND2AQ8N6M9 145 aa12.56□□□□□ -0.4
SMG7-203ENST00000367538 PRAF2O60831 178 aa12.55□□□□□ -0.4
SMG7-203ENST00000367538 CST7O76096 145 aa12.55□□□□□ -0.4
SMG7-203ENST00000367538 ORM1P02763 201 aa12.55□□□□□ -0.4
SMG7-203ENST00000367538 S100A11P31949 105 aa12.55□□□□□ -0.4
SMG7-203ENST00000367538 PCNPQ8WW12 178 aaKnown RBP12.55□□□□□ -0.4
SMG7-203ENST00000367538 TMEM70Q9BUB7 260 aa12.55□□□□□ -0.4
SMG7-203ENST00000367538 ZNF492Q9P255 531 aa12.55□□□□□ -0.4
SMG7-203ENST00000367538 TP53TG3Q9ULZ0 132 aa12.55□□□□□ -0.4
SMG7-203ENST00000367538 TRGV4A0A0C4DH28 118 aa12.54□□□□□ -0.4
SMG7-203ENST00000367538 K7EQD1 137 aa12.54□□□□□ -0.4
SMG7-203ENST00000367538 PVALBP20472 110 aaPredicted RBP12.54□□□□□ -0.4
SMG7-203ENST00000367538 BTCP35070 178 aa12.54□□□□□ -0.4
SMG7-203ENST00000367538 BAXQ07812 192 aa12.54□□□□□ -0.4
SMG7-203ENST00000367538 BAK1Q16611 211 aa12.54□□□□□ -0.4
SMG7-203ENST00000367538 Q6ZSN1 163 aa12.54□□□□□ -0.4
SMG7-203ENST00000367538 NTN5Q8WTR8 489 aaPredicted RBP12.54□□□□□ -0.4
SMG7-203ENST00000367538 LSM5Q9Y4Y9 91 aaKnown RBP12.54□□□□□ -0.4
SMG7-203ENST00000367538 UBE2L5PA0A1B0GUS4 154 aa12.53□□□□□ -0.4
SMG7-203ENST00000367538 SULT1A1P50225 295 aa12.53□□□□□ -0.4
SMG7-203ENST00000367538 HBG1P69891 147 aa12.53□□□□□ -0.4
SMG7-203ENST00000367538 HBG2P69892 147 aa12.53□□□□□ -0.4
SMG7-203ENST00000367538 EXOC3-AS1Q8N2X6 119 aa12.53□□□□□ -0.4
SMG7-203ENST00000367538 OR10G4Q8NGN3 311 aa12.53□□□□□ -0.4
SMG7-203ENST00000367538 TXNDC17Q9BRA2 123 aa12.53□□□□□ -0.4
SMG7-203ENST00000367538 C11orf1Q9H5F2 150 aa12.53□□□□□ -0.4
SMG7-203ENST00000367538 SMR3BP02814 79 aaPredicted RBP12.52□□□□□ -0.41
SMG7-203ENST00000367538 PYYP10082 97 aa12.52□□□□□ -0.41
SMG7-203ENST00000367538 PRR9Q5T870 116 aa12.52□□□□□ -0.41
SMG7-203ENST00000367538 STX12Q86Y82 276 aa12.52□□□□□ -0.41
SMG7-203ENST00000367538 WFDC10BQ8IUB3 73 aa12.52□□□□□ -0.41
SMG7-203ENST00000367538 BLNKQ8WV28 456 aa12.52□□□□□ -0.41
SMG7-203ENST00000367538 LYRM2Q9NU23 88 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms