RNA–Protein interactions for RNA: ENST00000366822.2

LINC01558-201, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2

Gene LINC01558, Length 1,173 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-201ENST00000366822 C11orf52Q96A22 123 aa12.92□□□□□ -0.34
LINC01558-201ENST00000366822 LINC00477Q96M19 166 aa12.92□□□□□ -0.34
LINC01558-201ENST00000366822 EIF5A2Q9GZV4 153 aaKnown RBP12.92□□□□□ -0.34
LINC01558-201ENST00000366822 AGPAT4-IT1Q9H0P7 198 aa12.92□□□□□ -0.34
LINC01558-201ENST00000366822 TUBA4BQ9H853 241 aa12.92□□□□□ -0.34
LINC01558-201ENST00000366822 K7EQM0 130 aa12.91□□□□□ -0.34
LINC01558-201ENST00000366822 PDE6DO43924 150 aa12.91□□□□□ -0.34
LINC01558-201ENST00000366822 AMTNQ6UX39 209 aa12.91□□□□□ -0.34
LINC01558-201ENST00000366822 TMEM75Q8N9X5 138 aa12.91□□□□□ -0.34
LINC01558-201ENST00000366822 LOC102724200A0A096LPH7 203 aaPredicted RBP12.9□□□□□ -0.34
LINC01558-201ENST00000366822 IGKV3-20P01619 116 aa12.9□□□□□ -0.34
LINC01558-201ENST00000366822 IGLV2-11P01706 119 aa12.9□□□□□ -0.34
LINC01558-201ENST00000366822 CT45A10P0DMU9 189 aa12.9□□□□□ -0.34
LINC01558-201ENST00000366822 RPL35AP18077 110 aaKnown RBP12.9□□□□□ -0.34
LINC01558-201ENST00000366822 TMEM78Q5T7P6 136 aa12.9□□□□□ -0.34
LINC01558-201ENST00000366822 C2CD4CQ8TF44 421 aa12.9□□□□□ -0.34
LINC01558-201ENST00000366822 LINC00479Q96M42 142 aa12.9□□□□□ -0.34
LINC01558-201ENST00000366822 ODF3Q96PU9 254 aa12.9□□□□□ -0.34
LINC01558-201ENST00000366822 MED9Q9NWA0 146 aa12.9□□□□□ -0.34
LINC01558-201ENST00000366822 PPP1R14DQ9NXH3 145 aa12.9□□□□□ -0.34
LINC01558-201ENST00000366822 ZNF492Q9P255 531 aa12.9□□□□□ -0.34
LINC01558-201ENST00000366822 TRAV8-1A0A0A6YYK1 113 aa12.89□□□□□ -0.35
LINC01558-201ENST00000366822 FBLL1A6NHQ2 334 aaKnown RBP12.89□□□□□ -0.35
LINC01558-201ENST00000366822 AKR1C3P42330 323 aa12.89□□□□□ -0.35
LINC01558-201ENST00000366822 ZNF138P52744 262 aa12.89□□□□□ -0.35
LINC01558-201ENST00000366822 FAM19A4Q96LR4 140 aa12.89□□□□□ -0.35
LINC01558-201ENST00000366822 SMDT1Q9H4I9 107 aa12.89□□□□□ -0.35
LINC01558-201ENST00000366822 KLF12Q9Y4X4 402 aa12.89□□□□□ -0.35
LINC01558-201ENST00000366822 TRAV34A0A0B4J273 112 aa12.88□□□□□ -0.35
LINC01558-201ENST00000366822 TRBV6-1A0A0K0K1D8 114 aa12.88□□□□□ -0.35
LINC01558-201ENST00000366822 RAB19A4D1S5 217 aa12.88□□□□□ -0.35
LINC01558-201ENST00000366822 LINC00862A6NCI5 91 aa12.88□□□□□ -0.35
LINC01558-201ENST00000366822 TMEM250H0YL14 139 aa12.88□□□□□ -0.35
LINC01558-201ENST00000366822 SRP19P09132 144 aaKnown RBP12.88□□□□□ -0.35
LINC01558-201ENST00000366822 SRSF3P84103 164 aaKnown RBP12.88□□□□□ -0.35
LINC01558-201ENST00000366822 PEA15Q15121 130 aa12.88□□□□□ -0.35
LINC01558-201ENST00000366822 TMEM183BQ1AE95 376 aa12.88□□□□□ -0.35
LINC01558-201ENST00000366822 MORN3Q6PF18 240 aaPredicted RBP12.88□□□□□ -0.35
LINC01558-201ENST00000366822 SGK494Q96LW2 274 aa12.88□□□□□ -0.35
LINC01558-201ENST00000366822 PSG8Q9UQ74 426 aa12.88□□□□□ -0.35
LINC01558-201ENST00000366822 TRBV7-9A0A0J9YWB2 115 aa12.87□□□□□ -0.35
LINC01558-201ENST00000366822 S100A9P06702 114 aaKnown RBP12.87□□□□□ -0.35
LINC01558-201ENST00000366822 FRMD6-AS1P0C7T7 363 aa12.87□□□□□ -0.35
LINC01558-201ENST00000366822 FLI1Q01543 452 aaPredicted RBP12.87□□□□□ -0.35
LINC01558-201ENST00000366822 Q8TAT8 98 aa12.87□□□□□ -0.35
LINC01558-201ENST00000366822 FMC1Q96HJ9 113 aa12.87□□□□□ -0.35
LINC01558-201ENST00000366822 SLC35B3Q9H1N7 401 aa12.87□□□□□ -0.35
LINC01558-201ENST00000366822 LENEPQ9Y5L5 61 aa12.87□□□□□ -0.35
LINC01558-201ENST00000366822 KIR2DL5BA0A0G2JN68 375 aa12.86□□□□□ -0.35
LINC01558-201ENST00000366822 KIR2DL5BA0A0G2JPC4 375 aa12.86□□□□□ -0.35
LINC01558-201ENST00000366822 CRISP2P16562 243 aa12.86□□□□□ -0.35
LINC01558-201ENST00000366822 NUTF2P61970 127 aaKnown RBP12.86□□□□□ -0.35
LINC01558-201ENST00000366822 UBE2G1P62253 170 aa12.86□□□□□ -0.35
LINC01558-201ENST00000366822 KIR2DL5AQ8N109 375 aa12.86□□□□□ -0.35
LINC01558-201ENST00000366822 KIR2DL5BQ8NHK3 375 aa12.86□□□□□ -0.35
LINC01558-201ENST00000366822 CSTL1Q9H114 145 aa12.86□□□□□ -0.35
LINC01558-201ENST00000366822 C9JQL5 133 aa12.85□□□□□ -0.35
LINC01558-201ENST00000366822 GIG44P09565 113 aaPredicted RBP12.85□□□□□ -0.35
LINC01558-201ENST00000366822 TSPOP30536 169 aa12.85□□□□□ -0.35
LINC01558-201ENST00000366822 LEPP41159 167 aa12.85□□□□□ -0.35
LINC01558-201ENST00000366822 RPL35P42766 123 aaKnown RBP12.85□□□□□ -0.35
LINC01558-201ENST00000366822 APOC4P55056 127 aa12.85□□□□□ -0.35
LINC01558-201ENST00000366822 TAS2R60P59551 318 aa12.85□□□□□ -0.35
LINC01558-201ENST00000366822 DEFB121Q5J5C9 76 aa12.85□□□□□ -0.35
LINC01558-201ENST00000366822 PRNTQ86SH4 94 aa12.85□□□□□ -0.35
LINC01558-201ENST00000366822 Q86TA4 180 aa12.85□□□□□ -0.35
LINC01558-201ENST00000366822 TVP23CQ96ET8 276 aa12.85□□□□□ -0.35
LINC01558-201ENST00000366822 ASCL2Q99929 193 aa12.85□□□□□ -0.35
LINC01558-201ENST00000366822 DERL1Q9BUN8 251 aa12.85□□□□□ -0.35
LINC01558-201ENST00000366822 AGRNO00468 2067 aa12.84□□□□□ -0.35
LINC01558-201ENST00000366822 AMBPP02760 352 aa12.84□□□□□ -0.35
LINC01558-201ENST00000366822 CDKN1BP46527 198 aa12.84□□□□□ -0.35
LINC01558-201ENST00000366822 FXYD7P58549 80 aa12.84□□□□□ -0.35
LINC01558-201ENST00000366822 SPINK13Q1W4C9 94 aa12.84□□□□□ -0.35
LINC01558-201ENST00000366822 ZFAND2AQ8N6M9 145 aa12.84□□□□□ -0.35
LINC01558-201ENST00000366822 KLLNB2CW77 178 aa12.83□□□□□ -0.36
LINC01558-201ENST00000366822 M0R2Z0 102 aa12.83□□□□□ -0.36
LINC01558-201ENST00000366822 CRXO43186 299 aaPredicted RBP12.83□□□□□ -0.36
LINC01558-201ENST00000366822 LTAP01374 205 aa12.83□□□□□ -0.36
LINC01558-201ENST00000366822 SAPCD1Q5SSQ6 148 aa12.83□□□□□ -0.36
LINC01558-201ENST00000366822 COMMD7Q86VX2 200 aa12.83□□□□□ -0.36
LINC01558-201ENST00000366822 IGF2BP2-AS1Q96M15 143 aa12.83□□□□□ -0.36
LINC01558-201ENST00000366822 NDFIP1Q9BT67 221 aa12.83□□□□□ -0.36
LINC01558-201ENST00000366822 PARLQ9H300 379 aa12.83□□□□□ -0.36
LINC01558-201ENST00000366822 ZFP30Q9Y2G7 519 aa12.83□□□□□ -0.36
LINC01558-201ENST00000366822 UBE2CO00762 179 aa12.82□□□□□ -0.36
LINC01558-201ENST00000366822 CA1P00915 261 aaPredicted RBP12.82□□□□□ -0.36
LINC01558-201ENST00000366822 UQCC3Q6UW78 93 aa12.82□□□□□ -0.36
LINC01558-201ENST00000366822 EIF4E3Q8N5X7 224 aaKnown RBP12.82□□□□□ -0.36
LINC01558-201ENST00000366822 C1QTNF4Q9BXJ3 329 aa12.82□□□□□ -0.36
LINC01558-201ENST00000366822 TREM1Q9NP99 234 aa12.82□□□□□ -0.36
LINC01558-201ENST00000366822 KIR3DS1Q14943 382 aa12.81□□□□□ -0.36
LINC01558-201ENST00000366822 PRR9Q5T870 116 aa12.81□□□□□ -0.36
LINC01558-201ENST00000366822 COX8CQ7Z4L0 72 aa12.81□□□□□ -0.36
LINC01558-201ENST00000366822 BAGE2Q86Y30 109 aa12.81□□□□□ -0.36
LINC01558-201ENST00000366822 C8orf49Q96NF6 230 aa12.81□□□□□ -0.36
LINC01558-201ENST00000366822 XCL2Q9UBD3 114 aa12.81□□□□□ -0.36
LINC01558-201ENST00000366822 DNAH9Q9NYC9 4486 aa12.8□□□□□ -0.36
LINC01558-201ENST00000366822 TRAV12-2A0A075B6T6 113 aa12.8□□□□□ -0.36
LINC01558-201ENST00000366822 CEBPGP53567 150 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms