RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 ATP5G1P05496 136 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 ANXA3P12429 323 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 ATP5G3P48201 142 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 ALDH3B2P48448 385 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 CCL18P55774 89 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 ATP5IP56385 69 aaPredicted RBP3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 RHOBP62745 196 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 SRPXP78539 464 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 HIST1H1AQ02539 215 aaPredicted RBP3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 AKR1C1Q04828 323 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 CLINT1Q14677 625 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 SPANXN5Q5MJ07 72 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 SAMD13Q5VXD3 122 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 THAP8Q8NA92 274 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 BPIFCQ8NFQ6 507 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 OR10G8Q8NGN5 311 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 SCGB3A2Q96PL1 93 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 LINC01587Q99440 93 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 TMEM147Q9BVK8 224 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 LINC00588Q9Y4M8 146 aa3.58□□□□□ -1.84
RNU4-4P-201ENST00000364588 SMCO3A2RU48 225 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 PRSS46E5RG02 174 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 H3BRN7 92 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 SYNGR2O43760 224 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 MED6O75586 246 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 CFDP00746 253 aaPredicted RBP3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 SNRPCP09234 159 aaKnown RBP3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 OR5G3P0C626 314 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 TSPOP30536 169 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 DLK1P80370 383 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 ACOT7LQ6ZUV0 252 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 SSX7Q7RTT5 188 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 GPR141Q7Z602 305 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 SPATA12Q7Z6I5 190 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 OR8A1Q8NGG7 326 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 OR4D5Q8NGN0 318 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 GPR82Q96P67 336 aa3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 NOP10Q9NPE3 64 aaKnown RBP3.57□□□□□ -1.84
RNU4-4P-201ENST00000364588 TRAV26-1A0A087WT03 109 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 A0A0J9YY99 117 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 DUXBA0A1W2PPF3 345 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 FABP12A6NFH5 140 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 HYPMO75409 117 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 CCNKO75909 580 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 IL5P05113 134 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 LINC00869P0C866 280 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 RPL7P18124 248 aaKnown RBP3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 CXCL3P19876 107 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 TAS2R60P59551 318 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 B2MP61769 119 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 PPP1R1AQ13522 171 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 OR5I1Q13606 314 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 PSG3Q16557 428 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 TMEM128Q5BJH2 165 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 CYP2G1PQ6ZSU1 146 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 TMEM144Q7Z5S9 345 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 TMEM256Q8N2U0 113 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 LRRC20Q8TCA0 184 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 DYNC2LI1Q8TCX1 351 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 C16orf74Q96GX8 76 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 CIB3Q96Q77 187 aaPredicted RBP3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 SHANK2-AS3Q9BTD1 123 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 PARD6GQ9BYG4 376 aaPredicted RBP3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 Q9H8V8 135 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 CCDC59Q9P031 241 aaKnown RBP3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 RSL24D1Q9UHA3 163 aaKnown RBP3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 RABL2BQ9UNT1 228 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 HIGD1AQ9Y241 93 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 STRAPQ9Y3F4 350 aaKnown RBP3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 TIMM8BQ9Y5J9 83 aaPredicted RBP3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 LRP1BQ9NZR2 4599 aa3.56□□□□□ -1.84
RNU4-4P-201ENST00000364588 PIGBOS1A0A0B4J2F0 54 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 H3BTX0 84 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 ADAP1O75689 374 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 SFT2D2O95562 160 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 SLC25A6P12236 298 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 S100A7P31151 101 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 FAUP35544 74 aaKnown RBP3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 FUSP35637 526 aaKnown RBP eCLIP3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 CDKN1BP46527 198 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 DSCR10P59022 87 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 RRAS2P62070 204 aaPredicted RBP3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 POLR2GP62487 172 aaKnown RBP eCLIP3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 CYCSP99999 105 aaKnown RBP3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 SLC38A11Q08AI6 406 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 PYDC2Q56P42 97 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 LRTM2Q8N967 370 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 OR11H4Q8NGC9 324 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 MCFD2Q8NI22 146 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 RNASE8Q8TDE3 154 aaKnown RBP3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 TMEM263Q8WUH6 116 aaKnown RBP3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 RPUSD4Q96CM3 377 aaKnown RBP3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 GNPNAT1Q96EK6 184 aaPredicted RBP3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 SOSTQ9BQB4 213 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 MRPS26Q9BYN8 205 aaKnown RBP3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 SLIRPQ9GZT3 109 aaKnown RBP3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 ARL6Q9H0F7 186 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 ZNF586Q9NXT0 402 aa3.55□□□□□ -1.84
RNU4-4P-201ENST00000364588 RABL2AQ9UBK7 228 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms