RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 TCTEX1D4Q5JR98 221 aa16.77■□□□□ 0.27
SMURF1-201ENST00000361125 CTSZQ9UBR2 303 aa16.76■□□□□ 0.27
SMURF1-201ENST00000361125 COL4A3Q01955 1670 aa16.76■□□□□ 0.27
SMURF1-201ENST00000361125 TRAV26-2A0A0B4J265 109 aa16.76■□□□□ 0.27
SMURF1-201ENST00000361125 C11orf53Q8IXP5 236 aa16.76■□□□□ 0.27
SMURF1-201ENST00000361125 COX11Q9Y6N1 276 aa16.76■□□□□ 0.27
SMURF1-201ENST00000361125 DOCK9Q9BZ29 2069 aa16.76■□□□□ 0.27
SMURF1-201ENST00000361125 C22orf46C9J442 243 aa16.75■□□□□ 0.27
SMURF1-201ENST00000361125 C6orf226Q5I0X4 101 aa16.75■□□□□ 0.27
SMURF1-201ENST00000361125 TRPT1Q86TN4 253 aaKnown RBP16.75■□□□□ 0.27
SMURF1-201ENST00000361125 GAGE12JA6NER3 117 aa16.75■□□□□ 0.27
SMURF1-201ENST00000361125 NDUFA4O00483 81 aa16.75■□□□□ 0.27
SMURF1-201ENST00000361125 GAGE1Q13065 139 aa16.75■□□□□ 0.27
SMURF1-201ENST00000361125 GAGE4Q13068 117 aa16.75■□□□□ 0.27
SMURF1-201ENST00000361125 GAGE5Q13069 117 aa16.75■□□□□ 0.27
SMURF1-201ENST00000361125 GAGE13Q4V321 117 aa16.75■□□□□ 0.27
SMURF1-201ENST00000361125 JPT2Q9H910 190 aa16.75■□□□□ 0.27
SMURF1-201ENST00000361125 SMIM27A0A1W2PRY6 76 aa16.75■□□□□ 0.27
SMURF1-201ENST00000361125 COL6A6A6NMZ7 2263 aa16.75■□□□□ 0.27
SMURF1-201ENST00000361125 PSCAO43653 123 aa16.75■□□□□ 0.27
SMURF1-201ENST00000361125 SLAQ13239 276 aa16.75■□□□□ 0.27
SMURF1-201ENST00000361125 KLF2Q9Y5W3 355 aaPredicted RBP16.75■□□□□ 0.27
SMURF1-201ENST00000361125 SIGMAR1Q99720 223 aa16.74■□□□□ 0.27
SMURF1-201ENST00000361125 PRSS46E5RG02 174 aa16.74■□□□□ 0.27
SMURF1-201ENST00000361125 J3QLI3 93 aa16.74■□□□□ 0.27
SMURF1-201ENST00000361125 ZC2HC1BQ5TFG8 222 aa16.74■□□□□ 0.27
SMURF1-201ENST00000361125 CDPF1Q6NVV7 123 aa16.74■□□□□ 0.27
SMURF1-201ENST00000361125 KIR3DS1Q14943 382 aa16.74■□□□□ 0.27
SMURF1-201ENST00000361125 Q8NFD4 153 aa16.74■□□□□ 0.27
SMURF1-201ENST00000361125 TRAV8-4A0A0B4J246 113 aa16.73■□□□□ 0.27
SMURF1-201ENST00000361125 TIMM21Q9BVV7 248 aa16.73■□□□□ 0.27
SMURF1-201ENST00000361125 ANXA2RQ3ZCQ2 193 aa16.73■□□□□ 0.27
SMURF1-201ENST00000361125 FGF23Q9GZV9 251 aaPredicted RBP16.73■□□□□ 0.27
SMURF1-201ENST00000361125 PRB1P04280 392 aa16.72■□□□□ 0.27
SMURF1-201ENST00000361125 TP53TG1Q9Y2A0 90 aa16.72■□□□□ 0.27
SMURF1-201ENST00000361125 CD5LO43866 347 aa16.72■□□□□ 0.27
SMURF1-201ENST00000361125 A8MWV9 139 aa16.72■□□□□ 0.27
SMURF1-201ENST00000361125 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.72■□□□□ 0.27
SMURF1-201ENST00000361125 CT83Q5H943 113 aa16.72■□□□□ 0.27
SMURF1-201ENST00000361125 STPG4Q8N801 248 aa16.72■□□□□ 0.27
SMURF1-201ENST00000361125 KAAG1Q9UBP8 84 aa16.72■□□□□ 0.27
SMURF1-201ENST00000361125 AZU1P20160 251 aa16.71■□□□□ 0.27
SMURF1-201ENST00000361125 ATXN8Q156A1 80 aa16.71■□□□□ 0.27
SMURF1-201ENST00000361125 IGLC2P0DOY2 106 aa16.71■□□□□ 0.27
SMURF1-201ENST00000361125 IGLC3P0DOY3 106 aa16.71■□□□□ 0.27
SMURF1-201ENST00000361125 ZNF407Q9C0G0 2248 aa16.71■□□□□ 0.27
SMURF1-201ENST00000361125 KIF26AQ9ULI4 1882 aaPredicted RBP16.71■□□□□ 0.27
SMURF1-201ENST00000361125 GHRHP01286 108 aa16.71■□□□□ 0.27
SMURF1-201ENST00000361125 SS18Q15532 418 aa16.71■□□□□ 0.27
SMURF1-201ENST00000361125 F5H768 121 aa16.71■□□□□ 0.26
SMURF1-201ENST00000361125 IGHV1OR15-1A0A075B7D0 117 aa16.7■□□□□ 0.26
SMURF1-201ENST00000361125 FAM231DQ6ZW35 169 aa16.7■□□□□ 0.26
SMURF1-201ENST00000361125 C11orf52Q96A22 123 aa16.7■□□□□ 0.26
SMURF1-201ENST00000361125 PRR25Q96S07 402 aa16.7■□□□□ 0.26
SMURF1-201ENST00000361125 ACACAQ13085 2346 aa16.7■□□□□ 0.26
SMURF1-201ENST00000361125 FAM231BA6NCW3 169 aa16.7■□□□□ 0.26
SMURF1-201ENST00000361125 K7EN84 100 aa16.7■□□□□ 0.26
SMURF1-201ENST00000361125 IGLC1P0CG04 106 aa16.7■□□□□ 0.26
SMURF1-201ENST00000361125 FAM104BQ5XKR9 115 aa16.7■□□□□ 0.26
SMURF1-201ENST00000361125 IGFL2Q6UWQ7 119 aa16.7■□□□□ 0.26
SMURF1-201ENST00000361125 TMEM14CQ9P0S9 112 aa16.7■□□□□ 0.26
SMURF1-201ENST00000361125 GAGE12BA1L429 117 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 GAGE7O76087 117 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 GAGE12FP0CL80 117 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 GAGE12GP0CL81 117 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 GAGE12IP0CL82 117 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 LY6G5BQ8NDX9 201 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 IGHV3-38A0A0C4DH36 116 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 ESDP10768 282 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 DEFB112Q30KQ8 113 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 RNF138Q8WVD3 245 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 GPR179Q6PRD1 2367 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 THAP8Q8NA92 274 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 FXYD5Q96DB9 178 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 DAD1P61803 113 aa16.69■□□□□ 0.26
SMURF1-201ENST00000361125 ZC2HC1AQ96GY0 325 aa16.68■□□□□ 0.26
SMURF1-201ENST00000361125 C17orf77Q96MU5 243 aa16.68■□□□□ 0.26
SMURF1-201ENST00000361125 AKAP6Q13023 2319 aa16.68■□□□□ 0.26
SMURF1-201ENST00000361125 IGHV4-59P01825 116 aa16.68■□□□□ 0.26
SMURF1-201ENST00000361125 NEGR1Q7Z3B1 354 aa16.68■□□□□ 0.26
SMURF1-201ENST00000361125 KRTAP27-1Q3LI81 207 aa16.68■□□□□ 0.26
SMURF1-201ENST00000361125 MRPL51Q4U2R6 128 aaKnown RBP16.68■□□□□ 0.26
SMURF1-201ENST00000361125 PRIMA1Q86XR5 153 aa16.68■□□□□ 0.26
SMURF1-201ENST00000361125 MYMXA0A1B0GTQ4 84 aa16.67■□□□□ 0.26
SMURF1-201ENST00000361125 Q6ZSR3 168 aa16.67■□□□□ 0.26
SMURF1-201ENST00000361125 CDKN1BP46527 198 aa16.67■□□□□ 0.26
SMURF1-201ENST00000361125 IGHV7-4-1A0A0J9YVY3 117 aa16.67■□□□□ 0.26
SMURF1-201ENST00000361125 ZNF625Q96I27 306 aaPredicted RBP16.67■□□□□ 0.26
SMURF1-201ENST00000361125 IGHV1-24A0A0C4DH33 117 aa16.67■□□□□ 0.26
SMURF1-201ENST00000361125 NPSP0C0P6 89 aa16.67■□□□□ 0.26
SMURF1-201ENST00000361125 VWC2Q2TAL6 325 aa16.67■□□□□ 0.26
SMURF1-201ENST00000361125 CHAC1Q9BUX1 264 aa16.66■□□□□ 0.26
SMURF1-201ENST00000361125 HLA-DMBP28068 263 aa16.66■□□□□ 0.26
SMURF1-201ENST00000361125 DKK4Q9UBT3 224 aa16.66■□□□□ 0.26
SMURF1-201ENST00000361125 LEPROTO15243 131 aa16.66■□□□□ 0.26
SMURF1-201ENST00000361125 I3L3M4 83 aa16.66■□□□□ 0.26
SMURF1-201ENST00000361125 PRR20EP86478 221 aa16.65■□□□□ 0.26
SMURF1-201ENST00000361125 PRR20CP86479 221 aa16.65■□□□□ 0.26
SMURF1-201ENST00000361125 PRR20DP86480 221 aa16.65■□□□□ 0.26
SMURF1-201ENST00000361125 PRR20BP86481 221 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms