RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 PLCE1Q9P212 2302 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 TMEM89A2RUT3 159 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 C22orf46C9J442 243 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 LY6G5BQ8NDX9 201 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 CENPVL3A0A0U1RRI6 287 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 FOXI2Q6ZQN5 318 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 WFDC12Q8WWY7 111 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 DSCAMO60469 2012 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 MMP23AO75900 390 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 ADORA2A-AS1P86434 159 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 TMEM256Q8N2U0 113 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 I3L3M4 83 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 ORAOV1Q8WV07 137 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 CTSZQ9UBR2 303 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 LSM4Q9Y4Z0 139 aaKnown RBP3.86□□□□□ -1.79
SCN3A-202ENST00000360093 LOC102724200A0A096LPH7 203 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-202ENST00000360093 C11orf52Q96A22 123 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 LRP4O75096 1905 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 MYMXA0A1B0GTQ4 84 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 FSTL3O95633 263 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 UBE2E2Q96LR5 201 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 SPCS1Q9Y6A9 102 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 TTC28Q96AY4 2481 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 NOTCH3Q9UM47 2321 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 TRBV25-1A0A075B6N4 114 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 LOC105371267A0A1B0GV96 52 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 LINC00158P58513 81 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 S100A7L2Q5SY68 101 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 IGKV3D-20A0A0C4DH25 116 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 TEX48A0A1B0GUV7 120 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 IGLC7A0M8Q6 106 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 A8MWP6 167 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 M0R2P5 195 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 LGALS1P09382 135 aaKnown RBP3.86□□□□□ -1.79
SCN3A-202ENST00000360093 FAM104BQ5XKR9 115 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 ZNF491Q8N8L2 437 aa3.86□□□□□ -1.79
SCN3A-202ENST00000360093 ZFHX2Q9C0A1 2572 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-202ENST00000360093 SMIM27A0A1W2PRY6 76 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 INS-IGF2F8WCM5 200 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 SYS1-DBNDD2H3BUS1 97 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 TNFRSF6BO95407 300 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 DAD1P61803 113 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 PAX2Q02962 417 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 BCL6BQ8N143 479 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-202ENST00000360093 C10orf105Q8TEF2 133 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 PRORYQ9H606 182 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 ERG28Q9UKR5 140 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 TRAV2A0A0B4J234 112 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 A0A1B0GWB2 263 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 NCR2O95944 276 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 C6orf226Q5I0X4 101 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 TMEM158Q8WZ71 300 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 PRR20EP86478 221 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 PRR20CP86479 221 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 PRR20DP86480 221 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 PRR20BP86481 221 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 PRR20AP86496 221 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 DEFB112Q30KQ8 113 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 AMN1Q8IY45 258 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 FXYD5Q96DB9 178 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 TNRC6AQ8NDV7 1962 aaKnown RBP3.85□□□□□ -1.79
SCN3A-202ENST00000360093 PSCAO43653 123 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 AZU1P20160 251 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 FXYD7P58549 80 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 IL15RAQ13261 267 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 DMRTA1Q5VZB9 504 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 PYGO2Q9BRQ0 406 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 SPINK13Q1W4C9 94 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 CD300EQ496F6 205 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-202ENST00000360093 GFI1BQ5VTD9 330 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 SEM1Q6ZVN7 128 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 HAPLN4Q86UW8 402 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 Q8N8P6 123 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 EP400Q96L91 3159 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 IGHV3-73A0A0B4J1V6 119 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 CCL24O00175 119 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 SNAI2O43623 268 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 C10orf91Q5T1B1 145 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 C9orf66Q5T8R8 295 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 RMI2Q96E14 147 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 ZMAT4Q9H898 229 aa3.85□□□□□ -1.79
SCN3A-202ENST00000360093 A0A1W2PNU3 283 aaPredicted RBP3.84□□□□□ -1.79
SCN3A-202ENST00000360093 GGTLC3B5MD39 225 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 LEPROTO15243 131 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 NEGR1Q7Z3B1 354 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 MAPK1IP1LQ8NDC0 245 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 PHLDA1Q8WV24 401 aaPredicted RBP3.84□□□□□ -1.79
SCN3A-202ENST00000360093 JPT2Q9H910 190 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 TPSG1Q9NRR2 321 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 C20orf78Q9BR46 151 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 NHP2Q9NX24 153 aaKnown RBP3.84□□□□□ -1.79
SCN3A-202ENST00000360093 ST6GALNAC6Q969X2 333 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 TIMM21Q9BVV7 248 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 PGPEP1Q9NXJ5 209 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 IGHV4-61A0A0C4DH41 118 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 LYPD6Q86Y78 171 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 LINC00479Q96M42 142 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 XCL2Q9UBD3 114 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 PKIGQ9Y2B9 76 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 GRNP28799 593 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms