RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 C7orf77A4D0Y5 90 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 RBMY1BA6NDE4 496 aaKnown RBP5.26□□□□□ -1.57
VPS13A-201ENST00000355766 RBMY1EA6NEQ0 496 aaKnown RBP5.26□□□□□ -1.57
VPS13A-201ENST00000355766 LINC01548A6NM66 108 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 K7EMT4 169 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 M0R036 132 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 GGCTO75223 188 aaKnown RBP5.26□□□□□ -1.57
VPS13A-201ENST00000355766 OR10J4P0C629 311 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 RBMY1DP0C7P1 496 aaKnown RBP5.26□□□□□ -1.57
VPS13A-201ENST00000355766 CRYBB3P26998 211 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 ARL3P36405 182 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 GALR1P47211 349 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 ATP5G3P48201 142 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 CNN1P51911 297 aaKnown RBP5.26□□□□□ -1.57
VPS13A-201ENST00000355766 C9orf152Q5JTZ5 239 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 MORN5Q5VZ52 161 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 TOMM20LQ6UXN7 152 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 C15orf54Q8N8G6 183 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 MRPL53Q96EL3 112 aaKnown RBP5.26□□□□□ -1.57
VPS13A-201ENST00000355766 FMC1Q96HJ9 113 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 SLC50A1Q9BRV3 221 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 CHRDL1Q9BU40 450 aa5.26□□□□□ -1.57
VPS13A-201ENST00000355766 PLECQ15149 4684 aaKnown RBP5.25□□□□□ -1.57
VPS13A-201ENST00000355766 TRAV9-1A0A075B6T8 112 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 A8MWP6 167 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 K7EQM0 130 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 LGALS9O00182 355 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 PEX7O00628 323 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 BUB3O43684 328 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 NDUFB4O95168 129 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 LGALS1P09382 135 aaKnown RBP5.25□□□□□ -1.57
VPS13A-201ENST00000355766 AKR1C3P42330 323 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 RPL35P42766 123 aaKnown RBP5.25□□□□□ -1.57
VPS13A-201ENST00000355766 UBE2G2P60604 165 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 TMEM183BQ1AE95 376 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 C10orf99Q6UWK7 81 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 CLEC19AQ6UXS0 136 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 SIGLEC15Q6ZMC9 328 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 LINC01551Q86U37 167 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 ZNF329Q86UD4 541 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 GPHB5Q86YW7 130 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 CMTM2Q8TAZ6 248 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 GRAMD2BQ96HH9 432 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 AAMDCQ9H7C9 122 aa5.25□□□□□ -1.57
VPS13A-201ENST00000355766 DAZ1Q9NQZ3 744 aaKnown RBP5.25□□□□□ -1.57
VPS13A-201ENST00000355766 PEF1Q9UBV8 284 aaKnown RBP5.25□□□□□ -1.57
VPS13A-201ENST00000355766 TRAV5A0A0B4J249 113 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 RBAKDNA6NC62 111 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 HELTA6NFD8 242 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 SH2D7A6NKC9 451 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-201ENST00000355766 DNASE2O00115 360 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-201ENST00000355766 TCRAP04437 139 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 PYYP10082 97 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 FOLR2P14207 255 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 NPPCP23582 126 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 GNG4P50150 75 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 CEBPGP53567 150 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 RPL23P62829 140 aaKnown RBP5.24□□□□□ -1.57
VPS13A-201ENST00000355766 BTN1A1Q13410 526 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 RNF212Q495C1 297 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 FAM106AQ4KMX7 169 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 ATRAIDQ6UW56 229 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 COX8CQ7Z4L0 72 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 SBSPONQ8IVN8 264 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 OR8I2Q8N0Y5 310 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 Q8N9P0 234 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-201ENST00000355766 TMEM75Q8N9X5 138 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 ISOC2Q96AB3 205 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 ZNF414Q96IQ9 312 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 IGF2BP2-AS1Q96M15 143 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 NOL4LQ96MY1 436 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-201ENST00000355766 Q9H3A6 140 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 RPS10P5Q9NQ39 176 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 EPDR1Q9UM22 224 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 UFC1Q9Y3C8 167 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 FRAS1Q86XX4 4008 aa5.24□□□□□ -1.57
VPS13A-201ENST00000355766 TRBV20OR9-2A0A075B6H5 130 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 TRBV24-1A0A075B6N3 115 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 H7BYZ3 331 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 ISLRO14498 428 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 SLC25A5P05141 298 aaKnown RBP5.23□□□□□ -1.57
VPS13A-201ENST00000355766 CSN1S1P47710 185 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 CDX1P47902 265 aaPredicted RBP5.23□□□□□ -1.57
VPS13A-201ENST00000355766 UBE2G1P62253 170 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 RPL19P84098 196 aaKnown RBP5.23□□□□□ -1.57
VPS13A-201ENST00000355766 KIAA0141Q14154 515 aaPredicted RBP5.23□□□□□ -1.57
VPS13A-201ENST00000355766 ADIRFQ15847 76 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 ZNF674Q2M3X9 581 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 CENPWQ5EE01 88 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 FAM231DQ6ZW35 169 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 C4orf3Q8WVX3 66 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 MS4A10Q96PG2 267 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 GNB4Q9HAV0 340 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 EDA2RQ9HAV5 297 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 OSTCQ9NRP0 149 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 ZNF586Q9NXT0 402 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 ZFP30Q9Y2G7 519 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 SMAD5-AS1Q9Y6J3 95 aa5.23□□□□□ -1.57
VPS13A-201ENST00000355766 TRBV7-9A0A0J9YWB2 115 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 EIF3GO75821 320 aaKnown RBP eCLIP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms