RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 C18orf15Q96N68 181 aa8.86□□□□□ -0.99
CAPN9-202ENST00000354537 SLC50A1Q9BRV3 221 aa8.86□□□□□ -0.99
CAPN9-202ENST00000354537 HIF1ANQ9NWT6 349 aa8.86□□□□□ -0.99
CAPN9-202ENST00000354537 CHTOPQ9Y3Y2 248 aaKnown RBP8.86□□□□□ -0.99
CAPN9-202ENST00000354537 NBEAQ8NFP9 2946 aa8.85□□□□□ -0.99
CAPN9-202ENST00000354537 ICE1Q9Y2F5 2266 aa8.85□□□□□ -0.99
CAPN9-202ENST00000354537 IGHV4-4A0A075B6R2 117 aa8.85□□□□□ -0.99
CAPN9-202ENST00000354537 ZNF207O43670 478 aaKnown RBP8.85□□□□□ -0.99
CAPN9-202ENST00000354537 IL17RELQ6ZVW7 336 aa8.85□□□□□ -0.99
CAPN9-202ENST00000354537 MYOZ3Q8TDC0 251 aa8.85□□□□□ -0.99
CAPN9-202ENST00000354537 MRPL53Q96EL3 112 aaKnown RBP8.85□□□□□ -0.99
CAPN9-202ENST00000354537 NAA38Q9BRA0 125 aaKnown RBP8.85□□□□□ -0.99
CAPN9-202ENST00000354537 MSRB1Q9NZV6 116 aa8.85□□□□□ -0.99
CAPN9-202ENST00000354537 PRTN3P24158 256 aa8.85□□□□□ -0.99
CAPN9-202ENST00000354537 PRB3Q04118 309 aaPredicted RBP8.85□□□□□ -0.99
CAPN9-202ENST00000354537 C1orf122Q6ZSJ8 110 aa8.85□□□□□ -0.99
CAPN9-202ENST00000354537 DTX2Q86UW9 622 aa8.85□□□□□ -0.99
CAPN9-202ENST00000354537 Q8TAT8 98 aa8.85□□□□□ -0.99
CAPN9-202ENST00000354537 TMEM158Q8WZ71 300 aa8.85□□□□□ -0.99
CAPN9-202ENST00000354537 FOXC2Q99958 501 aa8.85□□□□□ -0.99
CAPN9-202ENST00000354537 LAGE3Q14657 143 aa8.84□□□□□ -0.99
CAPN9-202ENST00000354537 A0A087WX48 190 aa8.83□□□□□ -1
CAPN9-202ENST00000354537 TRAV12-1A0A0B4J245 112 aa8.83□□□□□ -1
CAPN9-202ENST00000354537 J3QR89 54 aa8.83□□□□□ -1
CAPN9-202ENST00000354537 CIDEAO60543 219 aa8.83□□□□□ -1
CAPN9-202ENST00000354537 ZC2HC1BQ5TFG8 222 aa8.83□□□□□ -1
CAPN9-202ENST00000354537 TMEM8BA6NDV4 472 aa8.83□□□□□ -1
CAPN9-202ENST00000354537 PLNP26678 52 aa8.83□□□□□ -1
CAPN9-202ENST00000354537 FOXI2Q6ZQN5 318 aa8.83□□□□□ -1
CAPN9-202ENST00000354537 WFDC3Q8IUB2 231 aa8.83□□□□□ -1
CAPN9-202ENST00000354537 DYNAPQ8N1N2 210 aa8.83□□□□□ -1
CAPN9-202ENST00000354537 S4R3C0 116 aa8.83□□□□□ -1
CAPN9-202ENST00000354537 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.82□□□□□ -1
CAPN9-202ENST00000354537 IGLL5B9A064 214 aa8.82□□□□□ -1
CAPN9-202ENST00000354537 LYNX1G3V0Z9 82 aa8.82□□□□□ -1
CAPN9-202ENST00000354537 LYNX1P0DP58 116 aa8.82□□□□□ -1
CAPN9-202ENST00000354537 TCTAP57738 103 aa8.82□□□□□ -1
CAPN9-202ENST00000354537 HES1Q14469 280 aa8.82□□□□□ -1
CAPN9-202ENST00000354537 MINOS1Q5TGZ0 78 aa8.82□□□□□ -1
CAPN9-202ENST00000354537 GTSCR1Q86UQ5 136 aa8.82□□□□□ -1
CAPN9-202ENST00000354537 MINOS1-NBL1R4GNA1 71 aa8.82□□□□□ -1
CAPN9-202ENST00000354537 K7EMI3 77 aa8.82□□□□□ -1
CAPN9-202ENST00000354537 NRACQ8N912 160 aa8.82□□□□□ -1
CAPN9-202ENST00000354537 CELSR3Q9NYQ7 3312 aa8.82□□□□□ -1
CAPN9-202ENST00000354537 A0A1B0GWB2 263 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 A0A1W2PRD5 423 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 A0A1W2PRF3 423 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 A0A1W2PRM7 423 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 BUB3O43684 328 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 GAS8-AS1O95177 125 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 NDPQ00604 133 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 MRAP2Q96G30 205 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 IGKV3D-20A0A0C4DH25 116 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 PRB4P10163 310 aaPredicted RBP8.81□□□□□ -1
CAPN9-202ENST00000354537 HLA-DMBP28068 263 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 RPL24P83731 157 aaKnown RBP8.81□□□□□ -1
CAPN9-202ENST00000354537 SAMD13Q5VXD3 122 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 FAM110DQ8TAY7 271 aaPredicted RBP8.81□□□□□ -1
CAPN9-202ENST00000354537 ZNF502Q8TBZ5 544 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 TIMD4Q96H15 378 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 ZFAND3Q9H8U3 227 aa8.81□□□□□ -1
CAPN9-202ENST00000354537 NHP2Q9NX24 153 aaKnown RBP8.81□□□□□ -1
CAPN9-202ENST00000354537 TEX48A0A1B0GUV7 120 aa8.8□□□□□ -1
CAPN9-202ENST00000354537 SLC25A16P16260 332 aa8.8□□□□□ -1
CAPN9-202ENST00000354537 C12orf74Q32Q52 190 aa8.8□□□□□ -1
CAPN9-202ENST00000354537 TM4SF20Q53R12 229 aa8.8□□□□□ -1
CAPN9-202ENST00000354537 SIGMAR1Q99720 223 aa8.8□□□□□ -1
CAPN9-202ENST00000354537 VKORC1Q9BQB6 163 aa8.8□□□□□ -1
CAPN9-202ENST00000354537 MRPL35Q9NZE8 188 aaKnown RBP8.8□□□□□ -1
CAPN9-202ENST00000354537 DSPP15924 2871 aaKnown RBP8.8□□□□□ -1
CAPN9-202ENST00000354537 SVILO95425 2214 aa8.8□□□□□ -1
CAPN9-202ENST00000354537 TRAV40A0A0B4J280 105 aa8.8□□□□□ -1
CAPN9-202ENST00000354537 NCBP2LA6PVI3 153 aaKnown RBP8.8□□□□□ -1
CAPN9-202ENST00000354537 GOSR1O95249 250 aa8.8□□□□□ -1
CAPN9-202ENST00000354537 ERCC8Q13216 396 aa8.8□□□□□ -1
CAPN9-202ENST00000354537 CD300EQ496F6 205 aaPredicted RBP8.8□□□□□ -1
CAPN9-202ENST00000354537 Q8NA96 180 aa8.8□□□□□ -1
CAPN9-202ENST00000354537 ZNF479Q96JC4 524 aa8.8□□□□□ -1
CAPN9-202ENST00000354537 SPANXB1Q9NS25 103 aaPredicted RBP8.8□□□□□ -1
CAPN9-202ENST00000354537 TMEM160Q9NX00 188 aa8.8□□□□□ -1
CAPN9-202ENST00000354537 PRAC2D3DTV9 90 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 H7C1H1 209 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 FBXL19-AS1Q494R0 122 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 C9orf47Q6ZRZ4 202 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 AGPAT4-IT1Q9H0P7 198 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 LENEPQ9Y5L5 61 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 IGHV7-81A0A0B4J1V7 117 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 IGHV7-4-1A0A0J9YVY3 117 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 GATA1P15976 413 aaPredicted RBP8.79□□□□□ -1
CAPN9-202ENST00000354537 ORMDL2Q53FV1 153 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 TMEM78Q5T7P6 136 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 VMO1Q7Z5L0 202 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 ATP6V0BQ99437 205 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 TTTY13Q9BZ97 58 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 ZGRF1Q86YA3 2104 aa8.79□□□□□ -1
CAPN9-202ENST00000354537 TRBV7-3A0A075B6L6 115 aa8.78□□□□□ -1
CAPN9-202ENST00000354537 F8VRH5 84 aa8.78□□□□□ -1
CAPN9-202ENST00000354537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.78□□□□□ -1
CAPN9-202ENST00000354537 K7ERJ3 54 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms