RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 DUX4L9Q6RFH8 374 aaPredicted RBP10.38□□□□□ -0.75
IFT88-202ENST00000351808 MRPL20Q9BYC9 149 aaKnown RBP10.38□□□□□ -0.75
IFT88-202ENST00000351808 HES7Q9BYE0 225 aa10.37□□□□□ -0.75
IFT88-202ENST00000351808 RAXQ9Y2V3 346 aa10.37□□□□□ -0.75
IFT88-202ENST00000351808 EFNA4P52798 201 aa10.37□□□□□ -0.75
IFT88-202ENST00000351808 A0A1W2PPI3 338 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 SRRM5B3KS81 715 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 INS-IGF2F8WCM5 200 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 SLC25A20O43772 301 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 LYZL6O75951 148 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 LINC01559Q495D7 138 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 SCGB1D4Q6XE38 83 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 PLEKHB2Q96CS7 222 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 SPXQ9BT56 116 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 TRBV19A0A075B6N1 114 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 CD7P09564 240 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 CRIP2P52943 208 aaPredicted RBP10.36□□□□□ -0.75
IFT88-202ENST00000351808 Q6Q795 121 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 C15orf53Q8NAA6 179 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 C9JAW5 83 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 EGR2P11161 476 aaPredicted RBP10.36□□□□□ -0.75
IFT88-202ENST00000351808 PLNP26678 52 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 SIGLEC15Q6ZMC9 328 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 NDUFA11Q86Y39 141 aa10.36□□□□□ -0.75
IFT88-202ENST00000351808 SPRNQ5BIV9 151 aa10.35□□□□□ -0.75
IFT88-202ENST00000351808 TMEM14CQ9P0S9 112 aa10.35□□□□□ -0.75
IFT88-202ENST00000351808 ONECUT1Q9UBC0 465 aa10.35□□□□□ -0.75
IFT88-202ENST00000351808 CSDC2Q9Y534 153 aaKnown RBP10.35□□□□□ -0.75
IFT88-202ENST00000351808 Q8N8P6 123 aa10.35□□□□□ -0.75
IFT88-202ENST00000351808 CADP27708 2225 aa10.35□□□□□ -0.75
IFT88-202ENST00000351808 ZNF815PA8K554 130 aa10.34□□□□□ -0.75
IFT88-202ENST00000351808 TMEM167AQ8TBQ9 72 aa10.34□□□□□ -0.75
IFT88-202ENST00000351808 ODF3Q96PU9 254 aa10.34□□□□□ -0.75
IFT88-202ENST00000351808 VKORC1Q9BQB6 163 aa10.34□□□□□ -0.75
IFT88-202ENST00000351808 TPSG1Q9NRR2 321 aa10.34□□□□□ -0.75
IFT88-202ENST00000351808 CCL11P51671 97 aa10.34□□□□□ -0.75
IFT88-202ENST00000351808 C3orf36Q3SXR2 165 aa10.34□□□□□ -0.75
IFT88-202ENST00000351808 PRR30Q53SZ7 412 aaPredicted RBP10.34□□□□□ -0.75
IFT88-202ENST00000351808 OR10J6PQ8NGY7 276 aa10.34□□□□□ -0.75
IFT88-202ENST00000351808 NTN5Q8WTR8 489 aaPredicted RBP10.34□□□□□ -0.75
IFT88-202ENST00000351808 CHCHD5Q9BSY4 110 aa10.34□□□□□ -0.75
IFT88-202ENST00000351808 NGBQ9NPG2 151 aa10.34□□□□□ -0.75
IFT88-202ENST00000351808 MDFICQ9P1T7 246 aa10.34□□□□□ -0.75
IFT88-202ENST00000351808 PRRC2CQ9Y520 2896 aaKnown RBP10.33□□□□□ -0.76
IFT88-202ENST00000351808 IGLV2-18A0A075B6J9 118 aa10.33□□□□□ -0.76
IFT88-202ENST00000351808 F8VRH5 84 aa10.33□□□□□ -0.76
IFT88-202ENST00000351808 C6orf15Q6UXA7 325 aaPredicted RBP10.33□□□□□ -0.76
IFT88-202ENST00000351808 TRPT1Q86TN4 253 aaKnown RBP10.33□□□□□ -0.76
IFT88-202ENST00000351808 Q8N1Y9 231 aa10.33□□□□□ -0.76
IFT88-202ENST00000351808 H7C1H1 209 aa10.33□□□□□ -0.76
IFT88-202ENST00000351808 FOLR3P41439 243 aa10.33□□□□□ -0.76
IFT88-202ENST00000351808 NRGNQ92686 78 aa10.33□□□□□ -0.76
IFT88-202ENST00000351808 PRADC1Q9BSG0 188 aa10.33□□□□□ -0.76
IFT88-202ENST00000351808 PLCE1Q9P212 2302 aa10.33□□□□□ -0.76
IFT88-202ENST00000351808 TMEM126AQ9H061 195 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 SPANXA1Q9NS26 97 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 CFAP47Q6ZTR5 3102 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 CCL4P13236 92 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 LAGE3Q14657 143 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 KLHL30-AS1Q8NEE0 82 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 IGLC6P0CF74 106 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 SLC25A16P16260 332 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 IGHV1-2P23083 117 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 ZNF80P51504 273 aaPredicted RBP10.32□□□□□ -0.76
IFT88-202ENST00000351808 TMEM155Q4W5P6 130 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 C5orf47Q569G3 176 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 DEFB108BQ8NET1 73 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 LINC01587Q99440 93 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 KLK15Q9H2R5 256 aa10.32□□□□□ -0.76
IFT88-202ENST00000351808 LINC00694P0DN24 101 aa10.31□□□□□ -0.76
IFT88-202ENST00000351808 SCNM1Q9BWG6 230 aa10.31□□□□□ -0.76
IFT88-202ENST00000351808 C21orf62Q9NYP8 219 aa10.31□□□□□ -0.76
IFT88-202ENST00000351808 LOC107984640A0A0U1RRK4 108 aa10.31□□□□□ -0.76
IFT88-202ENST00000351808 CFC1BP0CG36 223 aa10.31□□□□□ -0.76
IFT88-202ENST00000351808 CFC1P0CG37 223 aa10.31□□□□□ -0.76
IFT88-202ENST00000351808 DTX2Q86UW9 622 aa10.31□□□□□ -0.76
IFT88-202ENST00000351808 ZNF575Q86XF7 245 aa10.31□□□□□ -0.76
IFT88-202ENST00000351808 PRR25Q96S07 402 aa10.31□□□□□ -0.76
IFT88-202ENST00000351808 IGKV2-40A0A087WW87 121 aaPredicted RBP10.3□□□□□ -0.76
IFT88-202ENST00000351808 TRAV8-4A0A0B4J246 113 aa10.3□□□□□ -0.76
IFT88-202ENST00000351808 EPOPA6NHQ4 379 aa10.3□□□□□ -0.76
IFT88-202ENST00000351808 IGKV2D-40P01614 121 aaPredicted RBP10.3□□□□□ -0.76
IFT88-202ENST00000351808 ZNF833PQ6ZTB9 187 aa10.3□□□□□ -0.76
IFT88-202ENST00000351808 FAM57AQ8TBR7 257 aa10.3□□□□□ -0.76
IFT88-202ENST00000351808 DSPP15924 2871 aaKnown RBP10.3□□□□□ -0.76
IFT88-202ENST00000351808 TEX49A0A1B0GTD5 131 aa10.3□□□□□ -0.76
IFT88-202ENST00000351808 ORM1P02763 201 aa10.3□□□□□ -0.76
IFT88-202ENST00000351808 OR4C13Q8NGP0 309 aa10.3□□□□□ -0.76
IFT88-202ENST00000351808 Q8TAT8 98 aa10.3□□□□□ -0.76
IFT88-202ENST00000351808 TTTY12Q9BZ98 90 aa10.3□□□□□ -0.76
IFT88-202ENST00000351808 TRAV26-2A0A0B4J265 109 aa10.29□□□□□ -0.76
IFT88-202ENST00000351808 C10orf126Q8N4M7 172 aa10.29□□□□□ -0.76
IFT88-202ENST00000351808 CACNA1EQ15878 2313 aa10.29□□□□□ -0.76
IFT88-202ENST00000351808 K7EM74 188 aa10.29□□□□□ -0.76
IFT88-202ENST00000351808 IGLV2-23P01705 113 aa10.29□□□□□ -0.76
IFT88-202ENST00000351808 IGHG4P01861 327 aa10.29□□□□□ -0.76
IFT88-202ENST00000351808 CXCL12P48061 93 aa10.29□□□□□ -0.76
IFT88-202ENST00000351808 FOXC1Q12948 553 aa10.29□□□□□ -0.76
IFT88-202ENST00000351808 TRAV2A0A0B4J234 112 aa10.28□□□□□ -0.76
IFT88-202ENST00000351808 LY6G6EA0A0G2JKS1 128 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms