RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 ARMS2P0C7Q2 107 aa13.19□□□□□ -0.3
SMARCC2-202ENST00000347471 FAM231DQ6ZW35 169 aa13.19□□□□□ -0.3
SMARCC2-202ENST00000347471 SIGLECL1Q8N7X8 197 aa13.19□□□□□ -0.3
SMARCC2-202ENST00000347471 ZFP30Q9Y2G7 519 aa13.19□□□□□ -0.3
SMARCC2-202ENST00000347471 SH2D1AO60880 128 aa13.19□□□□□ -0.3
SMARCC2-202ENST00000347471 KRTDAPP60985 99 aa13.19□□□□□ -0.3
SMARCC2-202ENST00000347471 BORCS7Q96B45 105 aa13.19□□□□□ -0.3
SMARCC2-202ENST00000347471 RHPN1-AS1Q9BWJ2 59 aa13.19□□□□□ -0.3
SMARCC2-202ENST00000347471 A0A096LNT2 108 aa13.18□□□□□ -0.3
SMARCC2-202ENST00000347471 PLA2G2AP14555 144 aa13.18□□□□□ -0.3
SMARCC2-202ENST00000347471 HBBP68871 147 aa13.18□□□□□ -0.3
SMARCC2-202ENST00000347471 RCHY1Q96PM5 261 aa13.18□□□□□ -0.3
SMARCC2-202ENST00000347471 CRIP1P50238 77 aa13.18□□□□□ -0.3
SMARCC2-202ENST00000347471 TMEM78Q5T7P6 136 aa13.18□□□□□ -0.3
SMARCC2-202ENST00000347471 RBPMS2Q6ZRY4 209 aaKnown RBP13.18□□□□□ -0.3
SMARCC2-202ENST00000347471 PRSS22Q9GZN4 317 aa13.18□□□□□ -0.3
SMARCC2-202ENST00000347471 VPREB3Q9UKI3 123 aa13.18□□□□□ -0.3
SMARCC2-202ENST00000347471 MT-ND6P03923 174 aa13.17□□□□□ -0.3
SMARCC2-202ENST00000347471 PRR25Q96S07 402 aa13.17□□□□□ -0.3
SMARCC2-202ENST00000347471 YAE1D1Q9NRH1 226 aa13.17□□□□□ -0.3
SMARCC2-202ENST00000347471 TRAV9-1A0A075B6T8 112 aa13.17□□□□□ -0.3
SMARCC2-202ENST00000347471 SYNJ2BPP57105 145 aa13.17□□□□□ -0.3
SMARCC2-202ENST00000347471 HIST1H1AQ02539 215 aaPredicted RBP13.17□□□□□ -0.3
SMARCC2-202ENST00000347471 USMG5Q96IX5 58 aa13.17□□□□□ -0.3
SMARCC2-202ENST00000347471 GCN1Q92616 2671 aaKnown RBP13.17□□□□□ -0.3
SMARCC2-202ENST00000347471 FN1P02751 2386 aaKnown RBP13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 H0Y8G0 127 aa13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 J3QLI3 93 aa13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 ZNF80P51504 273 aaPredicted RBP13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 MBD6Q96DN6 1003 aa13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 PEF1Q9UBV8 284 aaKnown RBP13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 HAX1O00165 279 aa13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 SPRY2O43597 315 aa13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 ZNF138P52744 262 aa13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 A0A1W2PRX2 142 aa13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 C19orf71A6NCJ1 209 aa13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 HSBP1O75506 76 aa13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 PMCHL1Q16048 86 aa13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 FAM162BQ5T6X4 162 aa13.16□□□□□ -0.3
SMARCC2-202ENST00000347471 FAM106AQ4KMX7 169 aa13.15□□□□□ -0.3
SMARCC2-202ENST00000347471 Q6ZQT7 251 aa13.15□□□□□ -0.3
SMARCC2-202ENST00000347471 GSN-AS1Q9NRJ2 163 aa13.15□□□□□ -0.3
SMARCC2-202ENST00000347471 TMEM213A2RRL7 107 aa13.14□□□□□ -0.31
SMARCC2-202ENST00000347471 S100A12P80511 92 aa13.14□□□□□ -0.31
SMARCC2-202ENST00000347471 SAPCD1Q5SSQ6 148 aa13.14□□□□□ -0.31
SMARCC2-202ENST00000347471 LYZL1Q6UWQ5 148 aa13.14□□□□□ -0.31
SMARCC2-202ENST00000347471 AGPAT4-IT1Q9H0P7 198 aa13.14□□□□□ -0.31
SMARCC2-202ENST00000347471 A0A1B0GUT8 65 aa13.14□□□□□ -0.31
SMARCC2-202ENST00000347471 TP53TG3Q9ULZ0 132 aa13.14□□□□□ -0.31
SMARCC2-202ENST00000347471 TWIST1Q15672 202 aa13.13□□□□□ -0.31
SMARCC2-202ENST00000347471 SLC50A1Q9BRV3 221 aa13.13□□□□□ -0.31
SMARCC2-202ENST00000347471 ZNF492Q9P255 531 aa13.13□□□□□ -0.31
SMARCC2-202ENST00000347471 LOC389332A0A1B0GUA5 103 aa13.13□□□□□ -0.31
SMARCC2-202ENST00000347471 IGHG4P01861 327 aa13.13□□□□□ -0.31
SMARCC2-202ENST00000347471 NDUFA4O00483 81 aa13.13□□□□□ -0.31
SMARCC2-202ENST00000347471 C18orf65Q6ZTR6 163 aa13.12□□□□□ -0.31
SMARCC2-202ENST00000347471 DAZ1Q9NQZ3 744 aaKnown RBP13.12□□□□□ -0.31
SMARCC2-202ENST00000347471 A0A1W2PS18 150 aa13.12□□□□□ -0.31
SMARCC2-202ENST00000347471 WIPF2Q8TF74 440 aaPredicted RBP13.12□□□□□ -0.31
SMARCC2-202ENST00000347471 ZNF688P0C7X2 276 aa13.12□□□□□ -0.31
SMARCC2-202ENST00000347471 LINC00587B1AMM8 73 aa13.11□□□□□ -0.31
SMARCC2-202ENST00000347471 FOXE3Q13461 319 aa13.11□□□□□ -0.31
SMARCC2-202ENST00000347471 PPP1R14DQ9NXH3 145 aa13.11□□□□□ -0.31
SMARCC2-202ENST00000347471 TRAV8-2A0A0B4J237 113 aa13.11□□□□□ -0.31
SMARCC2-202ENST00000347471 RIGQ13278 110 aa13.11□□□□□ -0.31
SMARCC2-202ENST00000347471 C20orf173Q96LM9 149 aa13.11□□□□□ -0.31
SMARCC2-202ENST00000347471 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.1□□□□□ -0.31
SMARCC2-202ENST00000347471 COX19Q49B96 90 aa13.1□□□□□ -0.31
SMARCC2-202ENST00000347471 C19orf54Q5BKX5 351 aa13.1□□□□□ -0.31
SMARCC2-202ENST00000347471 Q6YL49 198 aa13.1□□□□□ -0.31
SMARCC2-202ENST00000347471 SMIM12Q96EX1 92 aa13.1□□□□□ -0.31
SMARCC2-202ENST00000347471 C18orf32Q8TCD1 76 aa13.1□□□□□ -0.31
SMARCC2-202ENST00000347471 TMEM190Q8WZ59 177 aa13.1□□□□□ -0.31
SMARCC2-202ENST00000347471 BMI1P35226 326 aa13.1□□□□□ -0.31
SMARCC2-202ENST00000347471 C16orf54Q6UWD8 224 aa13.1□□□□□ -0.31
SMARCC2-202ENST00000347471 OR4B1Q8NGF8 309 aa13.1□□□□□ -0.31
SMARCC2-202ENST00000347471 OR10J6PQ8NGY7 276 aa13.1□□□□□ -0.31
SMARCC2-202ENST00000347471 DPF1Q92782 380 aa13.1□□□□□ -0.31
SMARCC2-202ENST00000347471 UFC1Q9Y3C8 167 aa13.09□□□□□ -0.31
SMARCC2-202ENST00000347471 FABP5P3A8MUU1 101 aa13.09□□□□□ -0.31
SMARCC2-202ENST00000347471 ATOH7Q8N100 152 aa13.09□□□□□ -0.31
SMARCC2-202ENST00000347471 SMR3AQ99954 134 aa13.09□□□□□ -0.31
SMARCC2-202ENST00000347471 NRN1Q9NPD7 142 aa13.09□□□□□ -0.31
SMARCC2-202ENST00000347471 MSRB1Q9NZV6 116 aa13.09□□□□□ -0.31
SMARCC2-202ENST00000347471 SMKR1H3BMG3 65 aa13.09□□□□□ -0.31
SMARCC2-202ENST00000347471 M0R2Z0 102 aa13.09□□□□□ -0.31
SMARCC2-202ENST00000347471 IGLV1-40P01703 118 aa13.09□□□□□ -0.31
SMARCC2-202ENST00000347471 LINC00310P59036 64 aa13.09□□□□□ -0.31
SMARCC2-202ENST00000347471 KIR3DS1Q14943 382 aa13.09□□□□□ -0.31
SMARCC2-202ENST00000347471 C1orf194Q5T5A4 169 aa13.09□□□□□ -0.31
SMARCC2-202ENST00000347471 FER1L6-AS1Q8NA97 138 aa13.09□□□□□ -0.31
SMARCC2-202ENST00000347471 IGHV4OR15-8A0A075B7B6 117 aa13.08□□□□□ -0.32
SMARCC2-202ENST00000347471 A0A087WW49 117 aa13.08□□□□□ -0.32
SMARCC2-202ENST00000347471 COA6Q5JTJ3 125 aaKnown RBP13.08□□□□□ -0.32
SMARCC2-202ENST00000347471 AMN1Q8IY45 258 aa13.08□□□□□ -0.32
SMARCC2-202ENST00000347471 IGHV7-4-1A0A0J9YVY3 117 aa13.08□□□□□ -0.32
SMARCC2-202ENST00000347471 NCR2O95944 276 aa13.08□□□□□ -0.32
SMARCC2-202ENST00000347471 KLHDC1Q8N7A1 406 aa13.08□□□□□ -0.32
SMARCC2-202ENST00000347471 ZNF469Q96JG9 3925 aaPredicted RBP13.08□□□□□ -0.32
SMARCC2-202ENST00000347471 HTN1P15515 57 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms