RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ERCC8Q13216 396 aa11.26□□□□□ -0.61
TSPAN4-201ENST00000346501 C9orf47Q6ZRZ4 202 aa11.26□□□□□ -0.61
TSPAN4-201ENST00000346501 OR2G3Q8NGZ4 309 aa11.26□□□□□ -0.61
TSPAN4-201ENST00000346501 PHYHIPLQ96FC7 376 aa11.26□□□□□ -0.61
TSPAN4-201ENST00000346501 AGPAT4-IT1Q9H0P7 198 aa11.26□□□□□ -0.61
TSPAN4-201ENST00000346501 APLNQ9ULZ1 77 aa11.26□□□□□ -0.61
TSPAN4-201ENST00000346501 IGKV2-40A0A087WW87 121 aaPredicted RBP11.25□□□□□ -0.61
TSPAN4-201ENST00000346501 C7orf71A4D174 169 aa11.25□□□□□ -0.61
TSPAN4-201ENST00000346501 RBAKDNA6NC62 111 aa11.25□□□□□ -0.61
TSPAN4-201ENST00000346501 IGKV2D-40P01614 121 aaPredicted RBP11.25□□□□□ -0.61
TSPAN4-201ENST00000346501 NMBP08949 121 aa11.25□□□□□ -0.61
TSPAN4-201ENST00000346501 ATP6V0CP27449 155 aa11.25□□□□□ -0.61
TSPAN4-201ENST00000346501 RAB2AP61019 212 aa11.25□□□□□ -0.61
TSPAN4-201ENST00000346501 TNFSF18Q9UNG2 199 aa11.25□□□□□ -0.61
TSPAN4-201ENST00000346501 TAAR5O14804 337 aa11.24□□□□□ -0.61
TSPAN4-201ENST00000346501 AZU1P20160 251 aa11.24□□□□□ -0.61
TSPAN4-201ENST00000346501 ZNF138P52744 262 aa11.24□□□□□ -0.61
TSPAN4-201ENST00000346501 Q5BKY6 102 aa11.24□□□□□ -0.61
TSPAN4-201ENST00000346501 HYLS1Q96M11 299 aa11.24□□□□□ -0.61
TSPAN4-201ENST00000346501 ACTR3CQ9C0K3 210 aaPredicted RBP11.24□□□□□ -0.61
TSPAN4-201ENST00000346501 OTORQ9NRC9 128 aa11.24□□□□□ -0.61
TSPAN4-201ENST00000346501 CSMD3Q7Z407 3707 aa11.23□□□□□ -0.61
TSPAN4-201ENST00000346501 TRBV7-9A0A0J9YWB2 115 aa11.23□□□□□ -0.61
TSPAN4-201ENST00000346501 PGPA6NDG6 321 aa11.23□□□□□ -0.61
TSPAN4-201ENST00000346501 ATP5G1P05496 136 aa11.23□□□□□ -0.61
TSPAN4-201ENST00000346501 P0DMU3 169 aa11.23□□□□□ -0.61
TSPAN4-201ENST00000346501 FAM231AP0DMU4 169 aa11.23□□□□□ -0.61
TSPAN4-201ENST00000346501 FAM231CP0DMU5 169 aa11.23□□□□□ -0.61
TSPAN4-201ENST00000346501 RNASE4P34096 147 aaKnown RBP11.23□□□□□ -0.61
TSPAN4-201ENST00000346501 ATP5G3P48201 142 aa11.23□□□□□ -0.61
TSPAN4-201ENST00000346501 ZNF503Q96F45 646 aa11.23□□□□□ -0.61
TSPAN4-201ENST00000346501 ZNF492Q9P255 531 aa11.23□□□□□ -0.61
TSPAN4-201ENST00000346501 RGS13O14921 159 aa11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 ARPC5O15511 151 aa11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 PRM2P04554 102 aa11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 CRISP2P16562 243 aa11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 KIR3DS1Q14943 382 aa11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 ARL6IP6Q8N6S5 226 aa11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 ZNF680Q8NEM1 530 aa11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 RNASE8Q8TDE3 154 aaKnown RBP11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 VGLL1Q99990 258 aa11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 NOP10Q9NPE3 64 aaKnown RBP11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 PLA2G2EQ9NZK7 142 aa11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 RPH3ALQ9UNE2 315 aa11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 LENEPQ9Y5L5 61 aa11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 STARD9Q9P2P6 4700 aa11.22□□□□□ -0.61
TSPAN4-201ENST00000346501 RNF222A6NCQ9 220 aa11.21□□□□□ -0.61
TSPAN4-201ENST00000346501 CBY3A6NI87 242 aa11.21□□□□□ -0.61
TSPAN4-201ENST00000346501 KLLNB2CW77 178 aa11.21□□□□□ -0.61
TSPAN4-201ENST00000346501 K7EQM0 130 aa11.21□□□□□ -0.61
TSPAN4-201ENST00000346501 HMGB3O15347 200 aaKnown RBP11.21□□□□□ -0.61
TSPAN4-201ENST00000346501 CXorf1O96002 111 aa11.21□□□□□ -0.61
TSPAN4-201ENST00000346501 ARL14EPLP0DKL9 152 aa11.21□□□□□ -0.61
TSPAN4-201ENST00000346501 AKR1C8PQ5T2L2 129 aa11.21□□□□□ -0.61
TSPAN4-201ENST00000346501 RPL7L1Q6DKI1 246 aaKnown RBP11.21□□□□□ -0.61
TSPAN4-201ENST00000346501 EIF4E3Q8N5X7 224 aaKnown RBP11.21□□□□□ -0.61
TSPAN4-201ENST00000346501 RAB24Q969Q5 203 aa11.21□□□□□ -0.61
TSPAN4-201ENST00000346501 TMEM167BQ9NRX6 74 aa11.21□□□□□ -0.61
TSPAN4-201ENST00000346501 DIRC3C9JPN6 131 aa11.2□□□□□ -0.62
TSPAN4-201ENST00000346501 F5H768 121 aa11.2□□□□□ -0.62
TSPAN4-201ENST00000346501 STAG3L2P0CL84 134 aa11.2□□□□□ -0.62
TSPAN4-201ENST00000346501 STAG3L3P0CL85 134 aa11.2□□□□□ -0.62
TSPAN4-201ENST00000346501 BTN1A1Q13410 526 aa11.2□□□□□ -0.62
TSPAN4-201ENST00000346501 UBE2DNLQ8IWF7 75 aa11.2□□□□□ -0.62
TSPAN4-201ENST00000346501 IQCF2Q8IXL9 164 aa11.2□□□□□ -0.62
TSPAN4-201ENST00000346501 C15orf53Q8NAA6 179 aa11.2□□□□□ -0.62
TSPAN4-201ENST00000346501 ARPC5LQ9BPX5 153 aa11.2□□□□□ -0.62
TSPAN4-201ENST00000346501 DYNC2H1Q8NCM8 4307 aaKnown RBP11.19□□□□□ -0.62
TSPAN4-201ENST00000346501 SERTM2A0A1B0GWG4 89 aa11.19□□□□□ -0.62
TSPAN4-201ENST00000346501 TMED6Q8WW62 240 aa11.19□□□□□ -0.62
TSPAN4-201ENST00000346501 FAM19A4Q96LR4 140 aa11.19□□□□□ -0.62
TSPAN4-201ENST00000346501 LINC00467Q9BRT7 94 aa11.19□□□□□ -0.62
TSPAN4-201ENST00000346501 NDFIP1Q9BT67 221 aa11.19□□□□□ -0.62
TSPAN4-201ENST00000346501 PLAC8L1A1L4L8 177 aa11.18□□□□□ -0.62
TSPAN4-201ENST00000346501 EIF3GO75821 320 aaKnown RBP eCLIP11.18□□□□□ -0.62
TSPAN4-201ENST00000346501 GCHFRP30047 84 aa11.18□□□□□ -0.62
TSPAN4-201ENST00000346501 CD300CQ08708 224 aa11.18□□□□□ -0.62
TSPAN4-201ENST00000346501 ANXA2RQ3ZCQ2 193 aa11.18□□□□□ -0.62
TSPAN4-201ENST00000346501 Q8TAT8 98 aa11.18□□□□□ -0.62
TSPAN4-201ENST00000346501 SH3BGRL3Q9H299 93 aa11.18□□□□□ -0.62
TSPAN4-201ENST00000346501 ZNF324O75467 553 aaPredicted RBP11.17□□□□□ -0.62
TSPAN4-201ENST00000346501 DAZ2Q13117 558 aaKnown RBP11.17□□□□□ -0.62
TSPAN4-201ENST00000346501 TMEM88Q6PEY1 159 aa11.17□□□□□ -0.62
TSPAN4-201ENST00000346501 GOLT1AQ6ZVE7 132 aa11.17□□□□□ -0.62
TSPAN4-201ENST00000346501 ZFAND2AQ8N6M9 145 aa11.17□□□□□ -0.62
TSPAN4-201ENST00000346501 C5orf17Q8NAS9 161 aa11.17□□□□□ -0.62
TSPAN4-201ENST00000346501 ST6GAL2Q96JF0 529 aa11.17□□□□□ -0.62
TSPAN4-201ENST00000346501 IGHV1OR15-1A0A075B7D0 117 aa11.16□□□□□ -0.62
TSPAN4-201ENST00000346501 A0A0D9SG52 128 aa11.16□□□□□ -0.62
TSPAN4-201ENST00000346501 CTXND1A0A1B0GTU2 59 aa11.16□□□□□ -0.62
TSPAN4-201ENST00000346501 GAGE12BA1L429 117 aa11.16□□□□□ -0.62
TSPAN4-201ENST00000346501 GAGE7O76087 117 aa11.16□□□□□ -0.62
TSPAN4-201ENST00000346501 GAGE12FP0CL80 117 aa11.16□□□□□ -0.62
TSPAN4-201ENST00000346501 GAGE12GP0CL81 117 aa11.16□□□□□ -0.62
TSPAN4-201ENST00000346501 GAGE12IP0CL82 117 aa11.16□□□□□ -0.62
TSPAN4-201ENST00000346501 EIF5AP63241 154 aaKnown RBP11.16□□□□□ -0.62
TSPAN4-201ENST00000346501 FAM159AQ6UWV7 190 aa11.16□□□□□ -0.62
TSPAN4-201ENST00000346501 POM121L12Q8N7R1 296 aa11.16□□□□□ -0.62
TSPAN4-201ENST00000346501 STOML3Q8TAV4 291 aa11.16□□□□□ -0.62
TSPAN4-201ENST00000346501 ATG101Q9BSB4 218 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms