RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 LINC00052Q96N35 136 aa7.54□□□□□ -1.2
TPM3-207ENST00000341372 WDR61Q9GZS3 305 aaKnown RBP7.54□□□□□ -1.2
TPM3-207ENST00000341372 CSTL1Q9H114 145 aa7.54□□□□□ -1.2
TPM3-207ENST00000341372 SNURFLB1AK76 121 aa7.54□□□□□ -1.2
TPM3-207ENST00000341372 APRG1Q8IVJ8 170 aa7.54□□□□□ -1.2
TPM3-207ENST00000341372 OR2G3Q8NGZ4 309 aa7.54□□□□□ -1.2
TPM3-207ENST00000341372 URB1-AS1Q96HZ7 61 aa7.54□□□□□ -1.2
TPM3-207ENST00000341372 PARD6GQ9BYG4 376 aaPredicted RBP7.54□□□□□ -1.2
TPM3-207ENST00000341372 NRN1Q9NPD7 142 aa7.54□□□□□ -1.2
TPM3-207ENST00000341372 H3BRN7 92 aa7.53□□□□□ -1.2
TPM3-207ENST00000341372 LINC00869P0C866 280 aa7.53□□□□□ -1.2
TPM3-207ENST00000341372 APOC4P55056 127 aa7.53□□□□□ -1.2
TPM3-207ENST00000341372 DEFB131AP59861 70 aa7.53□□□□□ -1.2
TPM3-207ENST00000341372 ZNF124Q15973 351 aa7.53□□□□□ -1.2
TPM3-207ENST00000341372 LINC01561Q8N1V8 128 aa7.53□□□□□ -1.2
TPM3-207ENST00000341372 ZNF98A6NK75 572 aa7.52□□□□□ -1.2
TPM3-207ENST00000341372 C9JQL5 133 aa7.52□□□□□ -1.2
TPM3-207ENST00000341372 SOCS3O14543 225 aa7.52□□□□□ -1.2
TPM3-207ENST00000341372 S100A7P31151 101 aa7.52□□□□□ -1.2
TPM3-207ENST00000341372 HBG1P69891 147 aa7.52□□□□□ -1.2
TPM3-207ENST00000341372 HBG2P69892 147 aa7.52□□□□□ -1.2
TPM3-207ENST00000341372 OR1B1Q8NGR6 318 aa7.52□□□□□ -1.2
TPM3-207ENST00000341372 MGST2Q99735 147 aa7.52□□□□□ -1.2
TPM3-207ENST00000341372 TMEM147Q9BVK8 224 aa7.52□□□□□ -1.2
TPM3-207ENST00000341372 RETNQ9HD89 108 aa7.52□□□□□ -1.2
TPM3-207ENST00000341372 UQCC1Q9NVA1 299 aa7.52□□□□□ -1.2
TPM3-207ENST00000341372 UBE2L5PA0A1B0GUS4 154 aa7.52□□□□□ -1.21
TPM3-207ENST00000341372 RAB19A4D1S5 217 aa7.52□□□□□ -1.21
TPM3-207ENST00000341372 AGPAT2O15120 278 aa7.52□□□□□ -1.21
TPM3-207ENST00000341372 ZNF688P0C7X2 276 aa7.52□□□□□ -1.21
TPM3-207ENST00000341372 CCL20P78556 96 aa7.52□□□□□ -1.21
TPM3-207ENST00000341372 ZNF726P1Q15940 193 aa7.52□□□□□ -1.21
TPM3-207ENST00000341372 ATP6V1FQ16864 119 aa7.52□□□□□ -1.21
TPM3-207ENST00000341372 SSX7Q7RTT5 188 aa7.52□□□□□ -1.21
TPM3-207ENST00000341372 GNPNAT1Q96EK6 184 aaPredicted RBP7.52□□□□□ -1.21
TPM3-207ENST00000341372 GPR82Q96P67 336 aa7.52□□□□□ -1.21
TPM3-207ENST00000341372 SHANK2-AS3Q9BTD1 123 aa7.52□□□□□ -1.21
TPM3-207ENST00000341372 EDA2RQ9HAV5 297 aa7.52□□□□□ -1.21
TPM3-207ENST00000341372 TP53TG1Q9Y2A0 90 aa7.52□□□□□ -1.21
TPM3-207ENST00000341372 AGRNO00468 2067 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 IFNA5P01569 189 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 ORM2P19652 201 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 RAB5CP51148 216 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 SAMD13Q5VXD3 122 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 LEMD1Q68G75 181 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 C17orf77Q96MU5 243 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 PSMG3Q9BT73 122 aaPredicted RBP7.51□□□□□ -1.21
TPM3-207ENST00000341372 SLC25A39Q9BZJ4 359 aaPredicted RBP7.51□□□□□ -1.21
TPM3-207ENST00000341372 RPRMQ9NS64 109 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 HIGD1AQ9Y241 93 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 HYPMO75409 117 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 ADCYAP1P18509 176 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 PATE2Q6UY27 113 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 TRPT1Q86TN4 253 aaKnown RBP7.51□□□□□ -1.21
TPM3-207ENST00000341372 OR8I2Q8N0Y5 310 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 FAM213BQ8TBF2 198 aa7.51□□□□□ -1.21
TPM3-207ENST00000341372 UMAD1C9J7I0 102 aa7.5□□□□□ -1.21
TPM3-207ENST00000341372 EIF3GO75821 320 aaKnown RBP eCLIP7.5□□□□□ -1.21
TPM3-207ENST00000341372 RPL35AP18077 110 aaKnown RBP7.5□□□□□ -1.21
TPM3-207ENST00000341372 GALR1P47211 349 aa7.5□□□□□ -1.21
TPM3-207ENST00000341372 PSMB3P49720 205 aa7.5□□□□□ -1.21
TPM3-207ENST00000341372 MEOX2P50222 304 aa7.5□□□□□ -1.21
TPM3-207ENST00000341372 SNRPD3P62318 126 aaKnown RBP7.5□□□□□ -1.21
TPM3-207ENST00000341372 SCGB1C1Q8TD33 95 aa7.5□□□□□ -1.21
TPM3-207ENST00000341372 OVOL2Q9BRP0 275 aa7.5□□□□□ -1.21
TPM3-207ENST00000341372 DOK5Q9P104 306 aa7.5□□□□□ -1.21
TPM3-207ENST00000341372 MPDU1O75352 247 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 FGF7P21781 194 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 RPL13AP40429 203 aaKnown RBP7.49□□□□□ -1.21
TPM3-207ENST00000341372 RPL29P47914 159 aaKnown RBP7.49□□□□□ -1.21
TPM3-207ENST00000341372 RAB31Q13636 194 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 PSMG4Q5JS54 123 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 S100A7AQ86SG5 101 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 RPP25LQ8N5L8 163 aaKnown RBP7.49□□□□□ -1.21
TPM3-207ENST00000341372 SLC25A22Q9H936 323 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 CBY1Q9Y3M2 126 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 TIMM9Q9Y5J7 89 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 ISLRO14498 428 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 MRPS12O15235 138 aaKnown RBP7.49□□□□□ -1.21
TPM3-207ENST00000341372 GAGE7O76087 117 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 OR5G3P0C626 314 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 GAGE12FP0CL80 117 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 GAGE12GP0CL81 117 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 GAGE12IP0CL82 117 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 RPL7P18124 248 aaKnown RBP7.49□□□□□ -1.21
TPM3-207ENST00000341372 RAB2AP61019 212 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 SERF2P84101 59 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 GAGE1Q13065 139 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 GAGE4Q13068 117 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 SUMO4Q6EEV6 95 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 NPCDR1Q9BY65 106 aa7.49□□□□□ -1.21
TPM3-207ENST00000341372 A0A087WZ39 114 aa7.48□□□□□ -1.21
TPM3-207ENST00000341372 A0A1B0GV50 99 aa7.48□□□□□ -1.21
TPM3-207ENST00000341372 TMEM218A2RU14 115 aa7.48□□□□□ -1.21
TPM3-207ENST00000341372 SCO1O75880 301 aa7.48□□□□□ -1.21
TPM3-207ENST00000341372 ID1P41134 155 aa7.48□□□□□ -1.21
TPM3-207ENST00000341372 DEFB135Q30KP9 77 aa7.48□□□□□ -1.21
TPM3-207ENST00000341372 SMUG1Q53HV7 270 aa7.48□□□□□ -1.21
TPM3-207ENST00000341372 MIC13Q5XKP0 118 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms