RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 K7EM74 188 aa7.58□□□□□ -1.2
PTCHD4-201ENST00000339488 TIMM23O14925 209 aa7.58□□□□□ -1.2
PTCHD4-201ENST00000339488 DNPH1O43598 174 aa7.58□□□□□ -1.2
PTCHD4-201ENST00000339488 YPEL5P62699 121 aa7.58□□□□□ -1.2
PTCHD4-201ENST00000339488 PIFOQ8TCI5 191 aa7.58□□□□□ -1.2
PTCHD4-201ENST00000339488 PLA2G2FQ9BZM2 168 aa7.58□□□□□ -1.2
PTCHD4-201ENST00000339488 GNG12Q9UBI6 72 aa7.58□□□□□ -1.2
PTCHD4-201ENST00000339488 LINC00527Q9UJ94 153 aa7.58□□□□□ -1.2
PTCHD4-201ENST00000339488 CEP192Q8TEP8 1941 aa7.58□□□□□ -1.2
PTCHD4-201ENST00000339488 PCNX2A6NKB5 2137 aa7.58□□□□□ -1.2
PTCHD4-201ENST00000339488 SPINT2O43291 252 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 UBE2D1P51668 147 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 LOXL3P58215 753 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 NDUFA11Q86Y39 141 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 PLXDC1Q8IUK5 500 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 C3orf22Q8N5N4 141 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 MYOZ3Q8TDC0 251 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 S1PR3Q99500 378 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 ZNF815PA8K554 130 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 CRIP1P50238 77 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 IL11RAQ14626 422 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 MRPL14Q6P1L8 145 aaKnown RBP7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 SIGLEC15Q6ZMC9 328 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 LINC00596Q86U02 117 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 FMC1Q96HJ9 113 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 C8orf49Q96NF6 230 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 TRGV8A0A0C4DH27 118 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 hADV29S1A0JD25 119 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 CD3EP07766 207 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 ZNF883P0CG24 379 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 COL9A1P20849 921 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 NSUN5P1Q3KNT7 163 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 RNF152Q8N8N0 203 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 C1orf43Q9BWL3 253 aa7.57□□□□□ -1.2
PTCHD4-201ENST00000339488 FSTL3O95633 263 aa7.56□□□□□ -1.2
PTCHD4-201ENST00000339488 IGHG4P01861 327 aa7.56□□□□□ -1.2
PTCHD4-201ENST00000339488 TCF15Q12870 199 aa7.56□□□□□ -1.2
PTCHD4-201ENST00000339488 CSMD1Q96PZ7 3565 aa7.56□□□□□ -1.2
PTCHD4-201ENST00000339488 IGHV3OR15-7A0A075B7D8 119 aa7.56□□□□□ -1.2
PTCHD4-201ENST00000339488 PRDM14Q9GZV8 571 aa7.56□□□□□ -1.2
PTCHD4-201ENST00000339488 RPUSD1Q9UJJ7 312 aaKnown RBP7.56□□□□□ -1.2
PTCHD4-201ENST00000339488 AHCTF1Q8WYP5 2266 aa7.56□□□□□ -1.2
PTCHD4-201ENST00000339488 OOEPA6NGQ2 149 aa7.55□□□□□ -1.2
PTCHD4-201ENST00000339488 J3QT63 122 aa7.55□□□□□ -1.2
PTCHD4-201ENST00000339488 IGLV2-11P01706 119 aa7.55□□□□□ -1.2
PTCHD4-201ENST00000339488 CFC1BP0CG36 223 aa7.55□□□□□ -1.2
PTCHD4-201ENST00000339488 CFC1P0CG37 223 aa7.55□□□□□ -1.2
PTCHD4-201ENST00000339488 APELAP0DMC3 54 aa7.55□□□□□ -1.2
PTCHD4-201ENST00000339488 SLC25A16P16260 332 aa7.55□□□□□ -1.2
PTCHD4-201ENST00000339488 Q6ZS46 218 aa7.55□□□□□ -1.2
PTCHD4-201ENST00000339488 WDR31Q8NA23 367 aa7.55□□□□□ -1.2
PTCHD4-201ENST00000339488 ZNRD1Q9P1U0 126 aa7.55□□□□□ -1.2
PTCHD4-201ENST00000339488 DSPP15924 2871 aaKnown RBP7.55□□□□□ -1.2
PTCHD4-201ENST00000339488 CXCL13O43927 109 aa7.55□□□□□ -1.2
PTCHD4-201ENST00000339488 U3KQK5 164 aa7.55□□□□□ -1.2
PTCHD4-201ENST00000339488 ATP5IP56385 69 aaPredicted RBP7.54□□□□□ -1.2
PTCHD4-201ENST00000339488 CD69Q07108 199 aa7.54□□□□□ -1.2
PTCHD4-201ENST00000339488 GAGE2AQ6NT46 116 aa7.54□□□□□ -1.2
PTCHD4-201ENST00000339488 DEFB104AQ8WTQ1 72 aa7.54□□□□□ -1.2
PTCHD4-201ENST00000339488 TMEM14BQ9NUH8 114 aa7.54□□□□□ -1.2
PTCHD4-201ENST00000339488 M0R2P5 195 aa7.54□□□□□ -1.2
PTCHD4-201ENST00000339488 RS1O15537 224 aa7.54□□□□□ -1.2
PTCHD4-201ENST00000339488 RPL35AP18077 110 aaKnown RBP7.54□□□□□ -1.2
PTCHD4-201ENST00000339488 C10orf55Q5SWW7 151 aa7.54□□□□□ -1.2
PTCHD4-201ENST00000339488 IGFBPL1Q8WX77 278 aa7.54□□□□□ -1.2
PTCHD4-201ENST00000339488 C17orf77Q96MU5 243 aa7.54□□□□□ -1.2
PTCHD4-201ENST00000339488 SMG1Q96Q15 3661 aaKnown RBP7.54□□□□□ -1.2
PTCHD4-201ENST00000339488 ASPMQ8IZT6 3477 aa7.54□□□□□ -1.2
PTCHD4-201ENST00000339488 E7EUB6 86 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 H3BMM0 161 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 RNASE2P10153 161 aaKnown RBP7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 LYRM7Q5U5X0 104 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 TMEM75Q8N9X5 138 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 MAFAQ8NHW3 353 aaPredicted RBP7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 UBE2WQ96B02 151 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 TRAV26-2A0A0B4J265 109 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 SHISA9B4DS77 424 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 LGALS9O00182 355 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 SPRY2O43597 315 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 ATP5LO75964 103 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 CNTFRP26992 372 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 PCBD1P61457 104 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 Q5XG85 94 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 POM121L12Q8N7R1 296 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 EEF1AKMT3Q96AZ1 226 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 IGKV1D-37A0A075B6S9 117 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 IGKV1-16P04430 117 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 HERVK_113P61574 105 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 Q1RN00 199 aa7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 PEAR1Q5VY43 1037 aaPredicted RBP7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 FOXA2Q9Y261 457 aaPredicted RBP7.53□□□□□ -1.2
PTCHD4-201ENST00000339488 TNRC6BQ9UPQ9 1833 aaKnown RBP7.52□□□□□ -1.21
PTCHD4-201ENST00000339488 M0R3E3 92 aa7.52□□□□□ -1.21
PTCHD4-201ENST00000339488 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
PTCHD4-201ENST00000339488 CCL3P10147 92 aa7.52□□□□□ -1.21
PTCHD4-201ENST00000339488 LIFP15018 202 aa7.52□□□□□ -1.21
PTCHD4-201ENST00000339488 TMEM219Q86XT9 240 aa7.52□□□□□ -1.21
PTCHD4-201ENST00000339488 ZNF714Q96N38 554 aa7.52□□□□□ -1.21
PTCHD4-201ENST00000339488 ZDBF2Q9HCK1 2354 aa7.52□□□□□ -1.21
PTCHD4-201ENST00000339488 POU2AF1Q16633 256 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms