RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 TCEAL7Q9BRU2 100 aa16.25■□□□□ 0.19
SDC3-202ENST00000339394 TRAV8-1A0A0A6YYK1 113 aa16.24■□□□□ 0.19
SDC3-202ENST00000339394 SERTM2A0A1B0GWG4 89 aa16.24■□□□□ 0.19
SDC3-202ENST00000339394 PEX7O00628 323 aa16.24■□□□□ 0.19
SDC3-202ENST00000339394 FXYD7P58549 80 aa16.24■□□□□ 0.19
SDC3-202ENST00000339394 RAB14P61106 215 aa16.24■□□□□ 0.19
SDC3-202ENST00000339394 MORN3Q6PF18 240 aaPredicted RBP16.24■□□□□ 0.19
SDC3-202ENST00000339394 CYB561D1Q8N8Q1 229 aa16.24■□□□□ 0.19
SDC3-202ENST00000339394 RARRES2Q99969 163 aa16.24■□□□□ 0.19
SDC3-202ENST00000339394 PPP1R14DQ9NXH3 145 aa16.24■□□□□ 0.19
SDC3-202ENST00000339394 CA1P00915 261 aaPredicted RBP16.23■□□□□ 0.19
SDC3-202ENST00000339394 MEF2BQ02080 365 aaPredicted RBP16.23■□□□□ 0.19
SDC3-202ENST00000339394 SGK494Q96LW2 274 aa16.23■□□□□ 0.19
SDC3-202ENST00000339394 LINC00479Q96M42 142 aa16.23■□□□□ 0.19
SDC3-202ENST00000339394 TXNDC17Q9BRA2 123 aa16.23■□□□□ 0.19
SDC3-202ENST00000339394 VAX2Q9UIW0 290 aa16.23■□□□□ 0.19
SDC3-202ENST00000339394 DNAH9Q9NYC9 4486 aa16.23■□□□□ 0.19
SDC3-202ENST00000339394 K7EQM0 130 aa16.22■□□□□ 0.19
SDC3-202ENST00000339394 TAGLN2P37802 199 aaKnown RBP16.22■□□□□ 0.19
SDC3-202ENST00000339394 ZNF138P52744 262 aa16.22■□□□□ 0.19
SDC3-202ENST00000339394 SPINK13Q1W4C9 94 aa16.22■□□□□ 0.19
SDC3-202ENST00000339394 Q8TAT8 98 aa16.22■□□□□ 0.19
SDC3-202ENST00000339394 ZNF492Q9P255 531 aa16.22■□□□□ 0.19
SDC3-202ENST00000339394 LOC102723971A0A1B0GUV8 181 aa16.21■□□□□ 0.19
SDC3-202ENST00000339394 RBFOX3A6NFN3 312 aa16.21■□□□□ 0.19
SDC3-202ENST00000339394 F6UZH7 168 aa16.21■□□□□ 0.19
SDC3-202ENST00000339394 M0R2Z0 102 aa16.21■□□□□ 0.19
SDC3-202ENST00000339394 ODF3Q96PU9 254 aa16.21■□□□□ 0.19
SDC3-202ENST00000339394 ASCL2Q99929 193 aa16.21■□□□□ 0.19
SDC3-202ENST00000339394 B9D2Q9BPU9 175 aa16.21■□□□□ 0.19
SDC3-202ENST00000339394 XCL2Q9UBD3 114 aa16.21■□□□□ 0.19
SDC3-202ENST00000339394 SCO2A0A1W2PP80 73 aa16.21■□□□□ 0.18
SDC3-202ENST00000339394 UBE2CO00762 179 aa16.21■□□□□ 0.18
SDC3-202ENST00000339394 IGLV2-11P01706 119 aa16.21■□□□□ 0.18
SDC3-202ENST00000339394 FAM19A4Q96LR4 140 aa16.21■□□□□ 0.18
SDC3-202ENST00000339394 FAM210AQ96ND0 272 aa16.21■□□□□ 0.18
SDC3-202ENST00000339394 TRAV34A0A0B4J273 112 aa16.2■□□□□ 0.18
SDC3-202ENST00000339394 CDKN1BP46527 198 aa16.2■□□□□ 0.18
SDC3-202ENST00000339394 CLLU1Q5K131 121 aa16.2■□□□□ 0.18
SDC3-202ENST00000339394 NBEAL2Q6ZNJ1 2754 aa16.2■□□□□ 0.18
SDC3-202ENST00000339394 TMEM75Q8N9X5 138 aa16.19■□□□□ 0.18
SDC3-202ENST00000339394 C1QTNF4Q9BXJ3 329 aa16.19■□□□□ 0.18
SDC3-202ENST00000339394 EIF5A2Q9GZV4 153 aaKnown RBP16.19■□□□□ 0.18
SDC3-202ENST00000339394 TRAV12-2A0A075B6T6 113 aa16.18■□□□□ 0.18
SDC3-202ENST00000339394 CRXO43186 299 aaPredicted RBP16.18■□□□□ 0.18
SDC3-202ENST00000339394 PDE6DO43924 150 aa16.18■□□□□ 0.18
SDC3-202ENST00000339394 KIR3DS1Q14943 382 aa16.18■□□□□ 0.18
SDC3-202ENST00000339394 TOR2AQ5JU69 321 aa16.18■□□□□ 0.18
SDC3-202ENST00000339394 ZNF506Q5JVG8 444 aa16.18■□□□□ 0.18
SDC3-202ENST00000339394 Q6ZWC4 215 aa16.18■□□□□ 0.18
SDC3-202ENST00000339394 C2CD4CQ8TF44 421 aa16.18■□□□□ 0.18
SDC3-202ENST00000339394 PSG8Q9UQ74 426 aa16.18■□□□□ 0.18
SDC3-202ENST00000339394 KLF12Q9Y4X4 402 aa16.18■□□□□ 0.18
SDC3-202ENST00000339394 TSPOP30536 169 aa16.17■□□□□ 0.18
SDC3-202ENST00000339394 FLI1Q01543 452 aaPredicted RBP16.17■□□□□ 0.18
SDC3-202ENST00000339394 DEFB135Q30KP9 77 aa16.17■□□□□ 0.18
SDC3-202ENST00000339394 CSNK1G2-AS1Q8NCQ2 148 aa16.17■□□□□ 0.18
SDC3-202ENST00000339394 LENEPQ9Y5L5 61 aa16.17■□□□□ 0.18
SDC3-202ENST00000339394 TRBV7-9A0A0J9YWB2 115 aa16.17■□□□□ 0.18
SDC3-202ENST00000339394 FBLL1A6NHQ2 334 aaKnown RBP16.17■□□□□ 0.18
SDC3-202ENST00000339394 RGS13O14921 159 aa16.17■□□□□ 0.18
SDC3-202ENST00000339394 LEPP41159 167 aa16.17■□□□□ 0.18
SDC3-202ENST00000339394 C11orf52Q96A22 123 aa16.17■□□□□ 0.18
SDC3-202ENST00000339394 TVP23CQ96ET8 276 aa16.17■□□□□ 0.18
SDC3-202ENST00000339394 J3KRW8 73 aa16.16■□□□□ 0.18
SDC3-202ENST00000339394 AMBPP02760 352 aa16.16■□□□□ 0.18
SDC3-202ENST00000339394 CRISP2P16562 243 aa16.16■□□□□ 0.18
SDC3-202ENST00000339394 AKR1C3P42330 323 aa16.16■□□□□ 0.18
SDC3-202ENST00000339394 PRNTQ86SH4 94 aa16.16■□□□□ 0.18
SDC3-202ENST00000339394 ZFAND2AQ8N6M9 145 aa16.16■□□□□ 0.18
SDC3-202ENST00000339394 FMC1Q96HJ9 113 aa16.16■□□□□ 0.18
SDC3-202ENST00000339394 TM2D3Q9BRN9 247 aa16.16■□□□□ 0.18
SDC3-202ENST00000339394 HUWE1Q7Z6Z7 4374 aaKnown RBP16.16■□□□□ 0.18
SDC3-202ENST00000339394 KLLNB2CW77 178 aa16.15■□□□□ 0.18
SDC3-202ENST00000339394 TMEM183BQ1AE95 376 aa16.15■□□□□ 0.18
SDC3-202ENST00000339394 IGF2BP2-AS1Q96M15 143 aa16.15■□□□□ 0.18
SDC3-202ENST00000339394 UBE2G1P62253 170 aa16.14■□□□□ 0.17
SDC3-202ENST00000339394 GFI1BQ5VTD9 330 aa16.14■□□□□ 0.17
SDC3-202ENST00000339394 RCHY1Q96PM5 261 aa16.14■□□□□ 0.17
SDC3-202ENST00000339394 TREM1Q9NP99 234 aa16.14■□□□□ 0.17
SDC3-202ENST00000339394 GPX1P07203 203 aa16.13■□□□□ 0.17
SDC3-202ENST00000339394 RNF183Q96D59 192 aa16.13■□□□□ 0.17
SDC3-202ENST00000339394 DERL1Q9BUN8 251 aa16.13■□□□□ 0.17
SDC3-202ENST00000339394 RETNQ9HD89 108 aa16.13■□□□□ 0.17
SDC3-202ENST00000339394 MED9Q9NWA0 146 aa16.13■□□□□ 0.17
SDC3-202ENST00000339394 INSP01308 110 aa16.13■□□□□ 0.17
SDC3-202ENST00000339394 RPL35P42766 123 aaKnown RBP16.13■□□□□ 0.17
SDC3-202ENST00000339394 PRR9Q5T870 116 aa16.13■□□□□ 0.17
SDC3-202ENST00000339394 Q86TA4 180 aa16.13■□□□□ 0.17
SDC3-202ENST00000339394 SPATA25Q9BR10 227 aa16.13■□□□□ 0.17
SDC3-202ENST00000339394 OVOL2Q9BRP0 275 aa16.13■□□□□ 0.17
SDC3-202ENST00000339394 NDFIP1Q9BT67 221 aa16.13■□□□□ 0.17
SDC3-202ENST00000339394 SPRY2O43597 315 aa16.12■□□□□ 0.17
SDC3-202ENST00000339394 S100A9P06702 114 aaKnown RBP16.12■□□□□ 0.17
SDC3-202ENST00000339394 RBMY1A1P0DJD3 496 aaKnown RBP16.12■□□□□ 0.17
SDC3-202ENST00000339394 RBMY1CP0DJD4 496 aa16.12■□□□□ 0.17
SDC3-202ENST00000339394 RNASE4P34096 147 aaKnown RBP16.12■□□□□ 0.17
SDC3-202ENST00000339394 RBMY1FQ15415 496 aaKnown RBP16.12■□□□□ 0.17
SDC3-202ENST00000339394 SAPCD1Q5SSQ6 148 aa16.12■□□□□ 0.17
SDC3-202ENST00000339394 C1orf158Q8N1D5 194 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms