RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 HLA-DRB4P13762 266 aa10.49□□□□□ -0.73
HLCS-201ENST00000336648 HERVK_113P63121 156 aa10.49□□□□□ -0.73
HLCS-201ENST00000336648 HLA-DRB4X5D2U9 266 aa10.49□□□□□ -0.73
HLCS-201ENST00000336648 H3BRN7 92 aa10.49□□□□□ -0.73
HLCS-201ENST00000336648 SDHAF1A6NFY7 115 aa10.49□□□□□ -0.73
HLCS-201ENST00000336648 H3BUA1 57 aa10.49□□□□□ -0.73
HLCS-201ENST00000336648 GBF1Q92538 1859 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 PLXNA1Q9UIW2 1896 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 RS1O15537 224 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 DKK1O94907 266 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 SMIM27A0A1W2PRY6 76 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 TMEM213A2RRL7 107 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 IGHV2-70P01814 119 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 C3orf56Q8N813 242 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 BRK1Q8WUW1 75 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 RALGAPA1Q6GYQ0 2036 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 C5orf63A6NC05 138 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 PRR25Q96S07 402 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 MESP1Q9BRJ9 268 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 CACNA1IQ9P0X4 2223 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 ADCYAP1P18509 176 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 MST1LQ2TV78 715 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 UNQ6494/PRO21346Q6UXR6 183 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 IGHV2-70DA0A0C4DH43 119 aa10.48□□□□□ -0.73
HLCS-201ENST00000336648 TAF1LQ8IZX4 1826 aa10.47□□□□□ -0.73
HLCS-201ENST00000336648 MRPL51Q4U2R6 128 aaKnown RBP10.47□□□□□ -0.73
HLCS-201ENST00000336648 F5H768 121 aa10.47□□□□□ -0.73
HLCS-201ENST00000336648 K7EM74 188 aa10.47□□□□□ -0.73
HLCS-201ENST00000336648 PAX9P55771 341 aa10.47□□□□□ -0.73
HLCS-201ENST00000336648 C8orf86Q6ZUL3 223 aa10.47□□□□□ -0.73
HLCS-201ENST00000336648 PSMB8P28062 276 aa10.47□□□□□ -0.73
HLCS-201ENST00000336648 CFHR2P36980 270 aa10.47□□□□□ -0.73
HLCS-201ENST00000336648 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.46□□□□□ -0.73
HLCS-201ENST00000336648 NPYP01303 97 aa10.46□□□□□ -0.73
HLCS-201ENST00000336648 BAALC-AS2P0C853 105 aa10.46□□□□□ -0.73
HLCS-201ENST00000336648 K7ERJ3 54 aa10.46□□□□□ -0.73
HLCS-201ENST00000336648 NXPH4O95158 308 aa10.46□□□□□ -0.73
HLCS-201ENST00000336648 TEX36Q5VZQ5 186 aa10.46□□□□□ -0.73
HLCS-201ENST00000336648 E9PQ18 207 aa10.46□□□□□ -0.73
HLCS-201ENST00000336648 F8VRH5 84 aa10.46□□□□□ -0.73
HLCS-201ENST00000336648 C11orf52Q96A22 123 aa10.46□□□□□ -0.73
HLCS-201ENST00000336648 LINC00479Q96M42 142 aa10.46□□□□□ -0.73
HLCS-201ENST00000336648 WDR90Q96KV7 1748 aa10.46□□□□□ -0.74
HLCS-201ENST00000336648 MLANAQ16655 118 aa10.46□□□□□ -0.74
HLCS-201ENST00000336648 IGKV1-6A0A0C4DH72 117 aa10.46□□□□□ -0.74
HLCS-201ENST00000336648 CRYGCP07315 174 aa10.46□□□□□ -0.74
HLCS-201ENST00000336648 SEC61GP60059 68 aa10.46□□□□□ -0.74
HLCS-201ENST00000336648 C12orf74Q32Q52 190 aa10.46□□□□□ -0.74
HLCS-201ENST00000336648 XCL2Q9UBD3 114 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 A0A0B4J2C4 111 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 A0A1B0GX51 115 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 SPINK13Q1W4C9 94 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 IGFL3Q6UXB1 125 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 C8orf49Q96NF6 230 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 MYOFQ9NZM1 2061 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 ELANEP08246 267 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 LINC01545Q5VT33 79 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 MRPL53Q96EL3 112 aaKnown RBP10.45□□□□□ -0.74
HLCS-201ENST00000336648 V9GYV3 84 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 PRB1P04280 392 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 IGLL1P15814 213 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 C8orf31Q8N9H6 132 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 A0A0G2JMZ2 1700 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 LRRC37A2A6NM11 1700 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 SCN2AQ99250 2005 aa10.45□□□□□ -0.74
HLCS-201ENST00000336648 PRB2P02812 416 aaPredicted RBP10.45□□□□□ -0.74
HLCS-201ENST00000336648 LHBP01229 141 aa10.44□□□□□ -0.74
HLCS-201ENST00000336648 FUSP35637 526 aaKnown RBP eCLIP10.44□□□□□ -0.74
HLCS-201ENST00000336648 Q6ZWC4 215 aa10.44□□□□□ -0.74
HLCS-201ENST00000336648 RHOHQ15669 191 aa10.44□□□□□ -0.74
HLCS-201ENST00000336648 ZNF134P52741 427 aa10.44□□□□□ -0.74
HLCS-201ENST00000336648 VWC2Q2TAL6 325 aa10.44□□□□□ -0.74
HLCS-201ENST00000336648 RNF144BQ7Z419 303 aa10.44□□□□□ -0.74
HLCS-201ENST00000336648 LENEPQ9Y5L5 61 aa10.44□□□□□ -0.74
HLCS-201ENST00000336648 ANXA2RQ3ZCQ2 193 aa10.43□□□□□ -0.74
HLCS-201ENST00000336648 KIF26BQ2KJY2 2108 aa10.43□□□□□ -0.74
HLCS-201ENST00000336648 ZNRF2Q8NHG8 242 aa10.43□□□□□ -0.74
HLCS-201ENST00000336648 CFC1BP0CG36 223 aa10.43□□□□□ -0.74
HLCS-201ENST00000336648 CFC1P0CG37 223 aa10.43□□□□□ -0.74
HLCS-201ENST00000336648 PRSS29PA6NIE9 313 aa10.43□□□□□ -0.74
HLCS-201ENST00000336648 C14orf132Q9NPU4 83 aa10.43□□□□□ -0.74
HLCS-201ENST00000336648 J3QQQ9 107 aa10.43□□□□□ -0.74
HLCS-201ENST00000336648 CASP8AP2Q9UKL3 1982 aa10.43□□□□□ -0.74
HLCS-201ENST00000336648 C10orf91Q5T1B1 145 aa10.42□□□□□ -0.74
HLCS-201ENST00000336648 ZNF493Q6ZR52 646 aa10.42□□□□□ -0.74
HLCS-201ENST00000336648 MUSTN1Q8IVN3 82 aa10.42□□□□□ -0.74
HLCS-201ENST00000336648 FHL1Q13642 323 aa10.42□□□□□ -0.74
HLCS-201ENST00000336648 C17orf58Q2M2W7 97 aa10.42□□□□□ -0.74
HLCS-201ENST00000336648 K7ENP7 123 aa10.42□□□□□ -0.74
HLCS-201ENST00000336648 LINC00205P59089 165 aa10.42□□□□□ -0.74
HLCS-201ENST00000336648 AMTNQ6UX39 209 aa10.42□□□□□ -0.74
HLCS-201ENST00000336648 CHD5Q8TDI0 1954 aa10.42□□□□□ -0.74
HLCS-201ENST00000336648 MDC1Q14676 2089 aaKnown RBP10.42□□□□□ -0.74
HLCS-201ENST00000336648 ZNF581Q9P0T4 197 aa10.42□□□□□ -0.74
HLCS-201ENST00000336648 IGHV7-4-1A0A0J9YVY3 117 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 RBAKDNA6NC62 111 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 LOXP28300 417 aaPredicted RBP10.41□□□□□ -0.74
HLCS-201ENST00000336648 SIGLEC8Q9NYZ4 499 aa10.41□□□□□ -0.74
HLCS-201ENST00000336648 SP5Q6BEB4 398 aaPredicted RBP10.41□□□□□ -0.74
HLCS-201ENST00000336648 C5orf24Q7Z6I8 188 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms