RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 IGKV3-20P01619 116 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 FRMD6-AS1P0C7T7 363 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 RPL35AP18077 110 aaKnown RBP12.85□□□□□ -0.35
CHGA-202ENST00000334654 GOLT1AQ6ZVE7 132 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 OR4B1Q8NGF8 309 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 OR10J6PQ8NGY7 276 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 TREM1Q9NP99 234 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 RPH3ALQ9UNE2 315 aa12.85□□□□□ -0.35
CHGA-202ENST00000334654 NBEAL2Q6ZNJ1 2754 aa12.84□□□□□ -0.35
CHGA-202ENST00000334654 GIG44P09565 113 aaPredicted RBP12.84□□□□□ -0.35
CHGA-202ENST00000334654 CT45A10P0DMU9 189 aa12.84□□□□□ -0.35
CHGA-202ENST00000334654 ATG101Q9BSB4 218 aa12.84□□□□□ -0.35
CHGA-202ENST00000334654 SEC11CQ9BY50 192 aa12.84□□□□□ -0.35
CHGA-202ENST00000334654 VAX2Q9UIW0 290 aa12.84□□□□□ -0.35
CHGA-202ENST00000334654 LOC102724200A0A096LPH7 203 aaPredicted RBP12.83□□□□□ -0.36
CHGA-202ENST00000334654 PEX7O00628 323 aa12.83□□□□□ -0.36
CHGA-202ENST00000334654 IGLV2-11P01706 119 aa12.83□□□□□ -0.36
CHGA-202ENST00000334654 MEF2BQ02080 365 aaPredicted RBP12.83□□□□□ -0.36
CHGA-202ENST00000334654 DEFB121Q5J5C9 76 aa12.83□□□□□ -0.36
CHGA-202ENST00000334654 MRAPQ8TCY5 172 aa12.83□□□□□ -0.36
CHGA-202ENST00000334654 HIST1H2BAQ96A08 127 aa12.83□□□□□ -0.36
CHGA-202ENST00000334654 FAM19A4Q96LR4 140 aa12.83□□□□□ -0.36
CHGA-202ENST00000334654 LINC00477Q96M19 166 aa12.83□□□□□ -0.36
CHGA-202ENST00000334654 LINC00479Q96M42 142 aa12.83□□□□□ -0.36
CHGA-202ENST00000334654 SLC35B3Q9H1N7 401 aa12.83□□□□□ -0.36
CHGA-202ENST00000334654 TRAV8-1A0A0A6YYK1 113 aa12.82□□□□□ -0.36
CHGA-202ENST00000334654 TOR2AQ5JU69 321 aa12.82□□□□□ -0.36
CHGA-202ENST00000334654 C10orf91Q5T1B1 145 aa12.82□□□□□ -0.36
CHGA-202ENST00000334654 CYB561D1Q8N8Q1 229 aa12.82□□□□□ -0.36
CHGA-202ENST00000334654 TCEAL7Q9BRU2 100 aa12.82□□□□□ -0.36
CHGA-202ENST00000334654 PPP1R14DQ9NXH3 145 aa12.82□□□□□ -0.36
CHGA-202ENST00000334654 SERTM2A0A1B0GWG4 89 aa12.81□□□□□ -0.36
CHGA-202ENST00000334654 SCO2A0A1W2PP80 73 aa12.81□□□□□ -0.36
CHGA-202ENST00000334654 C2CD4CQ8TF44 421 aa12.81□□□□□ -0.36
CHGA-202ENST00000334654 C11orf52Q96A22 123 aa12.81□□□□□ -0.36
CHGA-202ENST00000334654 SGK494Q96LW2 274 aa12.81□□□□□ -0.36
CHGA-202ENST00000334654 ZNF492Q9P255 531 aa12.81□□□□□ -0.36
CHGA-202ENST00000334654 KLF12Q9Y4X4 402 aa12.81□□□□□ -0.36
CHGA-202ENST00000334654 TRAV34A0A0B4J273 112 aa12.8□□□□□ -0.36
CHGA-202ENST00000334654 KIR2DL5BA0A0G2JN68 375 aa12.8□□□□□ -0.36
CHGA-202ENST00000334654 KIR2DL5BA0A0G2JPC4 375 aa12.8□□□□□ -0.36
CHGA-202ENST00000334654 KIR2DL5AQ8N109 375 aa12.8□□□□□ -0.36
CHGA-202ENST00000334654 KIR2DL5BQ8NHK3 375 aa12.8□□□□□ -0.36
CHGA-202ENST00000334654 Q8TAT8 98 aa12.8□□□□□ -0.36
CHGA-202ENST00000334654 TVP23CQ96ET8 276 aa12.8□□□□□ -0.36
CHGA-202ENST00000334654 ASCL2Q99929 193 aa12.8□□□□□ -0.36
CHGA-202ENST00000334654 CSTL1Q9H114 145 aa12.8□□□□□ -0.36
CHGA-202ENST00000334654 CARHSP1Q9Y2V2 147 aaKnown RBP12.8□□□□□ -0.36
CHGA-202ENST00000334654 TMEM250H0YL14 139 aa12.79□□□□□ -0.36
CHGA-202ENST00000334654 ZNF138P52744 262 aa12.79□□□□□ -0.36
CHGA-202ENST00000334654 FXYD7P58549 80 aa12.79□□□□□ -0.36
CHGA-202ENST00000334654 SRSF3P84103 164 aaKnown RBP12.79□□□□□ -0.36
CHGA-202ENST00000334654 TMEM78Q5T7P6 136 aa12.79□□□□□ -0.36
CHGA-202ENST00000334654 MORN3Q6PF18 240 aaPredicted RBP12.79□□□□□ -0.36
CHGA-202ENST00000334654 TMEM75Q8N9X5 138 aa12.79□□□□□ -0.36
CHGA-202ENST00000334654 ODF3Q96PU9 254 aa12.79□□□□□ -0.36
CHGA-202ENST00000334654 PRKDCP78527 4128 aaKnown RBP12.79□□□□□ -0.36
CHGA-202ENST00000334654 F6UZH7 168 aa12.78□□□□□ -0.36
CHGA-202ENST00000334654 M0R2Z0 102 aa12.78□□□□□ -0.36
CHGA-202ENST00000334654 CRXO43186 299 aaPredicted RBP12.78□□□□□ -0.36
CHGA-202ENST00000334654 KIR3DS1Q14943 382 aa12.78□□□□□ -0.36
CHGA-202ENST00000334654 SBSPONQ8IVN8 264 aa12.78□□□□□ -0.36
CHGA-202ENST00000334654 PSG8Q9UQ74 426 aa12.78□□□□□ -0.36
CHGA-202ENST00000334654 F8W036 122 aa12.78□□□□□ -0.36
CHGA-202ENST00000334654 PDE6DO43924 150 aa12.78□□□□□ -0.36
CHGA-202ENST00000334654 CRISP2P16562 243 aa12.78□□□□□ -0.36
CHGA-202ENST00000334654 FLI1Q01543 452 aaPredicted RBP12.78□□□□□ -0.36
CHGA-202ENST00000334654 SPINK13Q1W4C9 94 aa12.78□□□□□ -0.36
CHGA-202ENST00000334654 ZFAND2AQ8N6M9 145 aa12.78□□□□□ -0.36
CHGA-202ENST00000334654 CSNK1G2-AS1Q8NCQ2 148 aa12.78□□□□□ -0.36
CHGA-202ENST00000334654 TENM3Q9P273 2699 aa12.77□□□□□ -0.37
CHGA-202ENST00000334654 TRBV7-9A0A0J9YWB2 115 aa12.77□□□□□ -0.37
CHGA-202ENST00000334654 C9JQL5 133 aa12.77□□□□□ -0.37
CHGA-202ENST00000334654 K7EQM0 130 aa12.77□□□□□ -0.37
CHGA-202ENST00000334654 SRP19P09132 144 aaKnown RBP12.77□□□□□ -0.37
CHGA-202ENST00000334654 SFTA3P0C7M3 94 aa12.77□□□□□ -0.37
CHGA-202ENST00000334654 APOC4P55056 127 aa12.77□□□□□ -0.37
CHGA-202ENST00000334654 NUTF2P61970 127 aaKnown RBP12.77□□□□□ -0.37
CHGA-202ENST00000334654 TMEM183BQ1AE95 376 aa12.77□□□□□ -0.37
CHGA-202ENST00000334654 SOHLH1Q5JUK2 328 aa12.77□□□□□ -0.37
CHGA-202ENST00000334654 SVBPQ8N300 66 aa12.77□□□□□ -0.37
CHGA-202ENST00000334654 DERL1Q9BUN8 251 aa12.77□□□□□ -0.37
CHGA-202ENST00000334654 XCL2Q9UBD3 114 aa12.77□□□□□ -0.37
CHGA-202ENST00000334654 LENEPQ9Y5L5 61 aa12.77□□□□□ -0.37
CHGA-202ENST00000334654 TRBV6-1A0A0K0K1D8 114 aa12.76□□□□□ -0.37
CHGA-202ENST00000334654 CA1P00915 261 aaPredicted RBP12.76□□□□□ -0.37
CHGA-202ENST00000334654 CDKN1BP46527 198 aa12.76□□□□□ -0.37
CHGA-202ENST00000334654 FAM74A3Q4VXF1 159 aa12.76□□□□□ -0.37
CHGA-202ENST00000334654 PRR9Q5T870 116 aa12.76□□□□□ -0.37
CHGA-202ENST00000334654 COL7A1Q02388 2944 aa12.75□□□□□ -0.37
CHGA-202ENST00000334654 TRAV12-2A0A075B6T6 113 aa12.75□□□□□ -0.37
CHGA-202ENST00000334654 FBLL1A6NHQ2 334 aaKnown RBP12.75□□□□□ -0.37
CHGA-202ENST00000334654 KLLNB2CW77 178 aa12.75□□□□□ -0.37
CHGA-202ENST00000334654 UBE2CO00762 179 aa12.75□□□□□ -0.37
CHGA-202ENST00000334654 AKR1C3P42330 323 aa12.75□□□□□ -0.37
CHGA-202ENST00000334654 PRNTQ86SH4 94 aa12.75□□□□□ -0.37
CHGA-202ENST00000334654 FMC1Q96HJ9 113 aa12.75□□□□□ -0.37
CHGA-202ENST00000334654 RBMY1A1P0DJD3 496 aaKnown RBP12.74□□□□□ -0.37
CHGA-202ENST00000334654 RBMY1CP0DJD4 496 aa12.74□□□□□ -0.37
CHGA-202ENST00000334654 LEPP41159 167 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms