RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CCL24O00175 119 aa11.87□□□□□ -0.51
C9orf47-201ENST00000334490 DNAL4O96015 105 aa11.87□□□□□ -0.51
C9orf47-201ENST00000334490 FAM90A2PQ658T7 463 aa11.87□□□□□ -0.51
C9orf47-201ENST00000334490 SMIM12Q96EX1 92 aa11.87□□□□□ -0.51
C9orf47-201ENST00000334490 DPM2O94777 84 aa11.86□□□□□ -0.51
C9orf47-201ENST00000334490 ZNF491Q8N8L2 437 aa11.86□□□□□ -0.51
C9orf47-201ENST00000334490 MED12LQ86YW9 2145 aa11.86□□□□□ -0.51
C9orf47-201ENST00000334490 LINC01549A6NIU2 74 aa11.86□□□□□ -0.51
C9orf47-201ENST00000334490 PFN1P07737 140 aaKnown RBP11.86□□□□□ -0.51
C9orf47-201ENST00000334490 PHLDA1Q8WV24 401 aaPredicted RBP11.86□□□□□ -0.51
C9orf47-201ENST00000334490 CHCHD1Q96BP2 118 aaKnown RBP11.86□□□□□ -0.51
C9orf47-201ENST00000334490 CENPFP49454 3210 aa11.86□□□□□ -0.51
C9orf47-201ENST00000334490 TRAV12-2A0A075B6T6 113 aa11.86□□□□□ -0.51
C9orf47-201ENST00000334490 AMN1Q8IY45 258 aa11.86□□□□□ -0.51
C9orf47-201ENST00000334490 TMEM75Q8N9X5 138 aa11.86□□□□□ -0.51
C9orf47-201ENST00000334490 MS4A6AQ9H2W1 248 aa11.86□□□□□ -0.51
C9orf47-201ENST00000334490 CFHR3Q02985 330 aa11.85□□□□□ -0.51
C9orf47-201ENST00000334490 THAP8Q8NA92 274 aa11.85□□□□□ -0.51
C9orf47-201ENST00000334490 OR5A1Q8NGJ0 315 aa11.85□□□□□ -0.51
C9orf47-201ENST00000334490 CHTOPQ9Y3Y2 248 aaKnown RBP11.85□□□□□ -0.51
C9orf47-201ENST00000334490 F5H768 121 aa11.85□□□□□ -0.51
C9orf47-201ENST00000334490 CDKN1BP46527 198 aa11.85□□□□□ -0.51
C9orf47-201ENST00000334490 DAD1P61803 113 aa11.85□□□□□ -0.51
C9orf47-201ENST00000334490 RASL11AQ6T310 242 aa11.85□□□□□ -0.51
C9orf47-201ENST00000334490 C1orf159Q96HA4 380 aa11.85□□□□□ -0.51
C9orf47-201ENST00000334490 CSTL1Q9H114 145 aa11.85□□□□□ -0.51
C9orf47-201ENST00000334490 LSM4Q9Y4Z0 139 aaKnown RBP11.85□□□□□ -0.51
C9orf47-201ENST00000334490 LGALS1P09382 135 aaKnown RBP11.85□□□□□ -0.51
C9orf47-201ENST00000334490 GUSBP1Q15486 140 aa11.85□□□□□ -0.51
C9orf47-201ENST00000334490 LYPD6Q86Y78 171 aa11.85□□□□□ -0.51
C9orf47-201ENST00000334490 C8orf49Q96NF6 230 aa11.85□□□□□ -0.51
C9orf47-201ENST00000334490 EML6Q6ZMW3 1958 aa11.85□□□□□ -0.51
C9orf47-201ENST00000334490 A0A0U1RRA0 63 aa11.84□□□□□ -0.51
C9orf47-201ENST00000334490 SMPXQ9UHP9 88 aa11.84□□□□□ -0.51
C9orf47-201ENST00000334490 JMJD1CQ15652 2540 aa11.84□□□□□ -0.51
C9orf47-201ENST00000334490 GGTLC3B5MD39 225 aa11.84□□□□□ -0.51
C9orf47-201ENST00000334490 APOMO95445 188 aa11.84□□□□□ -0.51
C9orf47-201ENST00000334490 CTAG1AP78358 180 aa11.84□□□□□ -0.51
C9orf47-201ENST00000334490 CD300EQ496F6 205 aaPredicted RBP11.84□□□□□ -0.51
C9orf47-201ENST00000334490 APOC4P55056 127 aa11.84□□□□□ -0.51
C9orf47-201ENST00000334490 TMEM14CQ9P0S9 112 aa11.84□□□□□ -0.51
C9orf47-201ENST00000334490 ZFYVE26Q68DK2 2539 aa11.84□□□□□ -0.51
C9orf47-201ENST00000334490 IGHV1OR15-1A0A075B7D0 117 aa11.84□□□□□ -0.51
C9orf47-201ENST00000334490 SMKR1H3BMG3 65 aa11.84□□□□□ -0.51
C9orf47-201ENST00000334490 C22orf34Q6ZV56 151 aa11.84□□□□□ -0.51
C9orf47-201ENST00000334490 Q8N7P7 452 aa11.84□□□□□ -0.51
C9orf47-201ENST00000334490 CYYR1Q96J86 154 aa11.83□□□□□ -0.52
C9orf47-201ENST00000334490 RITA1Q96K30 269 aa11.83□□□□□ -0.52
C9orf47-201ENST00000334490 IGHV3-64A0A075B6Q5 118 aa11.83□□□□□ -0.52
C9orf47-201ENST00000334490 TRBV7-9A0A0J9YWB2 115 aa11.83□□□□□ -0.52
C9orf47-201ENST00000334490 NPBQ8NG41 125 aa11.83□□□□□ -0.52
C9orf47-201ENST00000334490 PRR25Q96S07 402 aa11.83□□□□□ -0.52
C9orf47-201ENST00000334490 PCNX3Q9H6A9 2034 aa11.83□□□□□ -0.52
C9orf47-201ENST00000334490 SSBP2P81877 361 aaPredicted RBP11.83□□□□□ -0.52
C9orf47-201ENST00000334490 FOXE3Q13461 319 aa11.83□□□□□ -0.52
C9orf47-201ENST00000334490 DSCAMO60469 2012 aa11.82□□□□□ -0.52
C9orf47-201ENST00000334490 SORL1Q92673 2214 aa11.82□□□□□ -0.52
C9orf47-201ENST00000334490 COLCA2A8K830 154 aa11.82□□□□□ -0.52
C9orf47-201ENST00000334490 IGLV1-47P01700 117 aa11.82□□□□□ -0.52
C9orf47-201ENST00000334490 ZNF726P1Q15940 193 aa11.82□□□□□ -0.52
C9orf47-201ENST00000334490 SMIM13P0DJ93 91 aa11.82□□□□□ -0.52
C9orf47-201ENST00000334490 LINC00518Q8N0U6 118 aa11.82□□□□□ -0.52
C9orf47-201ENST00000334490 Q8N9W7 124 aa11.82□□□□□ -0.52
C9orf47-201ENST00000334490 MRPL16Q9NX20 251 aaKnown RBP11.82□□□□□ -0.52
C9orf47-201ENST00000334490 RHODO00212 210 aa11.82□□□□□ -0.52
C9orf47-201ENST00000334490 ZNF843Q8N446 348 aa11.82□□□□□ -0.52
C9orf47-201ENST00000334490 LOC102724200A0A096LPH7 203 aaPredicted RBP11.81□□□□□ -0.52
C9orf47-201ENST00000334490 IGHV3-16A0A0C4DH30 117 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 GAGE12BA1L429 117 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 GAGE7O76087 117 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 GAGE12FP0CL80 117 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 GAGE12GP0CL81 117 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 GAGE12IP0CL82 117 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 DMRT1Q9Y5R6 373 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 A0A1B0GUS0 222 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 PSCAO43653 123 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 PRR20EP86478 221 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 PRR20CP86479 221 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 PRR20DP86480 221 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 PRR20BP86481 221 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 PRR20AP86496 221 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 IGKCP01834 107 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 TEX43Q6ZNM6 134 aa11.81□□□□□ -0.52
C9orf47-201ENST00000334490 C10orf142B7Z368 130 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 ZNF492Q9P255 531 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 TLN2Q9Y4G6 2542 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 CEP192Q8TEP8 1941 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 TMEM213A2RRL7 107 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 GAGE12JA6NER3 117 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 SLURP1P55000 103 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 GAGE1Q13065 139 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 GAGE4Q13068 117 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 GAGE5Q13069 117 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 ANXA2RQ3ZCQ2 193 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 GAGE13Q4V321 117 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 C9JQL5 133 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 CKS1BP61024 79 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 IL15RAQ13261 267 aa11.8□□□□□ -0.52
C9orf47-201ENST00000334490 AZU1P20160 251 aa11.79□□□□□ -0.52
C9orf47-201ENST00000334490 C5orf56Q8N8D9 126 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms