RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TIMM17AQ99595 171 aa4.43□□□□□ -1.7
PTPRB-202ENST00000334414 TMEM213A2RRL7 107 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 SMKR1H3BMG3 65 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 LGALS9O00182 355 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 CRYGBP07316 175 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 DUX4L9Q6RFH8 374 aaPredicted RBP4.42□□□□□ -1.7
PTPRB-202ENST00000334414 IGHV3-49A0A0A0MS15 119 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 ETV2O00321 342 aaPredicted RBP4.42□□□□□ -1.7
PTPRB-202ENST00000334414 FGFBP3Q8TAT2 258 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 PRSS29PA6NIE9 313 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 RHPN1-AS1Q9BWJ2 59 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 YLPM1P49750 1951 aaKnown RBP4.42□□□□□ -1.7
PTPRB-202ENST00000334414 TGFBR3LH3BV60 316 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 ZNF625Q96I27 306 aaPredicted RBP4.42□□□□□ -1.7
PTPRB-202ENST00000334414 LTBRP36941 435 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 EFNA4P52798 201 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 IGF2BP2-AS1Q96M15 143 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 NUP214P35658 2090 aaPredicted RBP4.42□□□□□ -1.7
PTPRB-202ENST00000334414 LCNL1Q6ZST4 164 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 FXYD7P58549 80 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 FLVCR1-AS1Q8TAF5 88 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 PTH2Q96A98 100 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 OPRPNQ99935 248 aaPredicted RBP4.42□□□□□ -1.7
PTPRB-202ENST00000334414 S4R3C0 116 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 PSCAO43653 123 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 DYNAPQ8N1N2 210 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 RNF114Q9Y508 228 aa4.42□□□□□ -1.7
PTPRB-202ENST00000334414 A0A087WWL8 130 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 IGHV3-11P01762 117 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 APOC4P55056 127 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 A0A0U1RRA0 63 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 PROP1O75360 226 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 DAZ2Q13117 558 aaKnown RBP4.41□□□□□ -1.7
PTPRB-202ENST00000334414 DAZ4Q86SG3 579 aaKnown RBP4.41□□□□□ -1.7
PTPRB-202ENST00000334414 Q8N1Y9 231 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 FDCSPQ8NFU4 85 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 DAZ3Q9NR90 486 aaKnown RBP4.41□□□□□ -1.7
PTPRB-202ENST00000334414 SBF1O95248 1867 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 ANKRD39Q53RE8 183 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 ZFP2Q6ZN57 461 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 UBE2DNLQ8IWF7 75 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 MYLKQ15746 1914 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 K7EN84 100 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 SAP30O75446 220 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 NDUFA7O95182 113 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 RNASE8Q8TDE3 154 aaKnown RBP4.41□□□□□ -1.7
PTPRB-202ENST00000334414 TRAV26-1A0A087WT03 109 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 IGHV3-35A0A0C4DH35 117 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 E9PLD3 99 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 FOXE3Q13461 319 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 IGKV1D-17A0A075B6S4 117 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 IGHV3-73A0A0B4J1V6 119 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 STPG1Q5TH74 334 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 DENND4AQ7Z401 1863 aa4.41□□□□□ -1.7
PTPRB-202ENST00000334414 TRAV3A0A0B4J244 114 aa4.4□□□□□ -1.7
PTPRB-202ENST00000334414 ARID1BQ8NFD5 2236 aaPredicted RBP4.4□□□□□ -1.7
PTPRB-202ENST00000334414 UBE2E1P51965 193 aa4.4□□□□□ -1.7
PTPRB-202ENST00000334414 DKK2Q9UBU2 259 aa4.4□□□□□ -1.7
PTPRB-202ENST00000334414 CLPSP04118 112 aa4.4□□□□□ -1.7
PTPRB-202ENST00000334414 NLRC5Q86WI3 1866 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 RPP25Q9BUL9 199 aaKnown RBP4.4□□□□□ -1.71
PTPRB-202ENST00000334414 TEX36Q5VZQ5 186 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 NDUFA11Q86Y39 141 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 TRAV25A0A0B4J276 109 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 IGHV1-58A0A0C4DH39 117 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 Q6Q795 121 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 B4DSR2 109 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 PSPNO60542 156 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 P0DMU3 169 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 FAM231AP0DMU4 169 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 FAM231CP0DMU5 169 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 CTRLP40313 264 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 PRR20EP86478 221 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 PRR20CP86479 221 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 PRR20DP86480 221 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 PRR20BP86481 221 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 PRR20AP86496 221 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 CRIPAKQ8N1N5 446 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 VOPP1Q96AW1 172 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 A0A0J9YXY3 114 aa4.4□□□□□ -1.71
PTPRB-202ENST00000334414 MCRIP2Q9BUT9 160 aaKnown RBP4.4□□□□□ -1.71
PTPRB-202ENST00000334414 LINC01619G3V211 115 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 A0A0G2JRQ6 117 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 J3QLI3 93 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 NREPQ16612 68 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 SVIPQ8NHG7 77 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 PRR19A6NJB7 356 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 CRYGCP07315 174 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 LINC00479Q96M42 142 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 Q9H8V8 135 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 METRNQ9UJH8 293 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 AMTNQ6UX39 209 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 A4D1N5 150 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 H7C423 109 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 K7EQD1 137 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 K7ERS5 55 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 IGKV1-16P04430 117 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 ZNF837Q96EG3 531 aaPredicted RBP4.39□□□□□ -1.71
PTPRB-202ENST00000334414 A0A087WV48 116 aa4.39□□□□□ -1.71
PTPRB-202ENST00000334414 COX7B2Q8TF08 81 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms