RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 FXYD5Q96DB9 178 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 SNHG12Q9BXW3 62 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 DNAH3Q8TD57 4116 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 A0A1W2PPV4 95 aa12.38□□□□□ -0.43
SHOX-201ENST00000334060 ZNF705GA8MUZ8 300 aaPredicted RBP12.38□□□□□ -0.43
SHOX-201ENST00000334060 STAG3L2P0CL84 134 aa12.38□□□□□ -0.43
SHOX-201ENST00000334060 STAG3L3P0CL85 134 aa12.38□□□□□ -0.43
SHOX-201ENST00000334060 IGLC2P0DOY2 106 aa12.38□□□□□ -0.43
SHOX-201ENST00000334060 ZNF25P17030 456 aaPredicted RBP12.38□□□□□ -0.43
SHOX-201ENST00000334060 WFDC10AQ9H1F0 79 aa12.38□□□□□ -0.43
SHOX-201ENST00000334060 MAP1LC3B2A6NCE7 125 aa12.38□□□□□ -0.43
SHOX-201ENST00000334060 PFN1P07737 140 aaKnown RBP12.38□□□□□ -0.43
SHOX-201ENST00000334060 KRTAP10-11P60412 298 aa12.38□□□□□ -0.43
SHOX-201ENST00000334060 RNF182Q8N6D2 247 aa12.38□□□□□ -0.43
SHOX-201ENST00000334060 STXBP6Q8NFX7 210 aa12.38□□□□□ -0.43
SHOX-201ENST00000334060 MAP1LC3BQ9GZQ8 125 aa12.38□□□□□ -0.43
SHOX-201ENST00000334060 ZNF785A8K8V0 405 aa12.37□□□□□ -0.43
SHOX-201ENST00000334060 NDUFB4O95168 129 aa12.37□□□□□ -0.43
SHOX-201ENST00000334060 PRB2P02812 416 aaPredicted RBP12.37□□□□□ -0.43
SHOX-201ENST00000334060 C20orf173Q96LM9 149 aa12.37□□□□□ -0.43
SHOX-201ENST00000334060 MS4A6AQ9H2W1 248 aa12.37□□□□□ -0.43
SHOX-201ENST00000334060 TRAV8-2A0A0B4J237 113 aa12.36□□□□□ -0.43
SHOX-201ENST00000334060 CTXND1A0A1B0GTU2 59 aa12.36□□□□□ -0.43
SHOX-201ENST00000334060 EREGO14944 169 aa12.36□□□□□ -0.43
SHOX-201ENST00000334060 CEBPGP53567 150 aa12.36□□□□□ -0.43
SHOX-201ENST00000334060 DCANP1Q8TF63 244 aa12.36□□□□□ -0.43
SHOX-201ENST00000334060 PAXXQ9BUH6 204 aa12.36□□□□□ -0.43
SHOX-201ENST00000334060 MRPL32Q9BYC8 188 aaKnown RBP12.36□□□□□ -0.43
SHOX-201ENST00000334060 TMEM250H0YL14 139 aa12.36□□□□□ -0.43
SHOX-201ENST00000334060 PCP4P48539 62 aa12.36□□□□□ -0.43
SHOX-201ENST00000334060 C20orf144Q9BQM9 153 aa12.36□□□□□ -0.43
SHOX-201ENST00000334060 TMEM208Q9BTX3 173 aa12.36□□□□□ -0.43
SHOX-201ENST00000334060 SOCS3O14543 225 aa12.35□□□□□ -0.43
SHOX-201ENST00000334060 CD7P09564 240 aa12.35□□□□□ -0.43
SHOX-201ENST00000334060 GCHFRP30047 84 aa12.35□□□□□ -0.43
SHOX-201ENST00000334060 UBE2G2P60604 165 aa12.35□□□□□ -0.43
SHOX-201ENST00000334060 UBE2L3P68036 154 aaKnown RBP12.35□□□□□ -0.43
SHOX-201ENST00000334060 PRR31Q5SQ13 230 aa12.35□□□□□ -0.43
SHOX-201ENST00000334060 KCNIP4Q6PIL6 250 aa12.35□□□□□ -0.43
SHOX-201ENST00000334060 EXOC3-AS1Q8N2X6 119 aa12.35□□□□□ -0.43
SHOX-201ENST00000334060 ACTL10Q5JWF8 245 aa12.34□□□□□ -0.43
SHOX-201ENST00000334060 SIGLEC8Q9NYZ4 499 aa12.34□□□□□ -0.43
SHOX-201ENST00000334060 ZNF256Q9Y2P7 627 aaPredicted RBP12.34□□□□□ -0.43
SHOX-201ENST00000334060 H7BYZ3 331 aa12.34□□□□□ -0.43
SHOX-201ENST00000334060 BPIFA4PQ86YQ2 179 aa12.34□□□□□ -0.43
SHOX-201ENST00000334060 YTHDF2Q9Y5A9 579 aaKnown RBP12.34□□□□□ -0.43
SHOX-201ENST00000334060 A0A1W2PS18 150 aa12.33□□□□□ -0.44
SHOX-201ENST00000334060 ZNF705FA8MVS1 300 aaPredicted RBP12.33□□□□□ -0.44
SHOX-201ENST00000334060 M0R3E3 92 aa12.33□□□□□ -0.44
SHOX-201ENST00000334060 PAFAH1B2P68402 229 aa12.33□□□□□ -0.44
SHOX-201ENST00000334060 GNG13Q9P2W3 67 aa12.33□□□□□ -0.44
SHOX-201ENST00000334060 TRBV19A0A075B6N1 114 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 F6UB75 175 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 ZNF688P0C7X2 276 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 ZNF705DP0CH99 300 aaPredicted RBP12.32□□□□□ -0.44
SHOX-201ENST00000334060 ZNF705BP0CI00 300 aaPredicted RBP12.32□□□□□ -0.44
SHOX-201ENST00000334060 RPL7P18124 248 aaKnown RBP12.32□□□□□ -0.44
SHOX-201ENST00000334060 C9orf66Q5T8R8 295 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 PRR25Q96S07 402 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 ASCL2Q99929 193 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 MIEN1Q9BRT3 115 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 NRN1Q9NPD7 142 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 NAGKQ9UJ70 344 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 NBEAP1P0C6P0 100 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 G0S2P27469 103 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 GALR1P47211 349 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 SAPCD1Q5SSQ6 148 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 RBPMS2Q6ZRY4 209 aaKnown RBP12.32□□□□□ -0.44
SHOX-201ENST00000334060 GRAMD2BQ96HH9 432 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 TMEM14CQ9P0S9 112 aa12.32□□□□□ -0.44
SHOX-201ENST00000334060 AGRNO00468 2067 aa12.31□□□□□ -0.44
SHOX-201ENST00000334060 PRAC2D3DTV9 90 aa12.31□□□□□ -0.44
SHOX-201ENST00000334060 K7EQG2 157 aa12.31□□□□□ -0.44
SHOX-201ENST00000334060 CNN1P51911 297 aaKnown RBP12.31□□□□□ -0.44
SHOX-201ENST00000334060 COTL1Q14019 142 aa12.31□□□□□ -0.44
SHOX-201ENST00000334060 APRG1Q8IVJ8 170 aa12.31□□□□□ -0.44
SHOX-201ENST00000334060 GGTLC3B5MD39 225 aa12.3□□□□□ -0.44
SHOX-201ENST00000334060 HIST1H1EP10412 219 aaKnown RBP12.3□□□□□ -0.44
SHOX-201ENST00000334060 ATP5G3P48201 142 aa12.3□□□□□ -0.44
SHOX-201ENST00000334060 GNG5P63218 68 aa12.3□□□□□ -0.44
SHOX-201ENST00000334060 ODF3L2Q3SX64 289 aa12.3□□□□□ -0.44
SHOX-201ENST00000334060 SAMD5Q5TGI4 173 aa12.3□□□□□ -0.44
SHOX-201ENST00000334060 GDF5OSQ5U4N7 250 aa12.3□□□□□ -0.44
SHOX-201ENST00000334060 CXorf1O96002 111 aa12.3□□□□□ -0.44
SHOX-201ENST00000334060 TAS2R45P59539 299 aa12.3□□□□□ -0.44
SHOX-201ENST00000334060 COL5A1-AS1Q5SY13 56 aa12.3□□□□□ -0.44
SHOX-201ENST00000334060 MANBALQ9NQG1 85 aa12.3□□□□□ -0.44
SHOX-201ENST00000334060 ZNF331Q9NQX6 463 aaPredicted RBP12.3□□□□□ -0.44
SHOX-201ENST00000334060 A0A087X0K7 114 aa12.29□□□□□ -0.44
SHOX-201ENST00000334060 SCGB1D1O95968 90 aa12.29□□□□□ -0.44
SHOX-201ENST00000334060 TMEM183BQ1AE95 376 aa12.29□□□□□ -0.44
SHOX-201ENST00000334060 PQLC2Q6ZP29 291 aa12.29□□□□□ -0.44
SHOX-201ENST00000334060 SMIM7Q9BQ49 75 aa12.29□□□□□ -0.44
SHOX-201ENST00000334060 TRAV9-1A0A075B6T8 112 aa12.29□□□□□ -0.44
SHOX-201ENST00000334060 PAGE4O60829 102 aa12.29□□□□□ -0.44
SHOX-201ENST00000334060 PSMG4Q5JS54 123 aa12.29□□□□□ -0.44
SHOX-201ENST00000334060 C16orf92Q96LL3 132 aa12.29□□□□□ -0.44
SHOX-201ENST00000334060 ATG101Q9BSB4 218 aa12.29□□□□□ -0.44
SHOX-201ENST00000334060 C19orf73Q9NVV2 129 aa12.29□□□□□ -0.44
SHOX-201ENST00000334060 ZFP30Q9Y2G7 519 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms