RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 SLC17A3O00476 420 aa10.77□□□□□ -0.69
TSPO-201ENST00000329563 PDE6DO43924 150 aa10.77□□□□□ -0.69
TSPO-201ENST00000329563 ICAM4Q14773 271 aa10.77□□□□□ -0.69
TSPO-201ENST00000329563 PSG3Q16557 428 aa10.77□□□□□ -0.69
TSPO-201ENST00000329563 ZNF506Q5JVG8 444 aa10.77□□□□□ -0.69
TSPO-201ENST00000329563 YTHDF2Q9Y5A9 579 aaKnown RBP10.77□□□□□ -0.69
TSPO-201ENST00000329563 TRAV8-2A0A0B4J237 113 aa10.76□□□□□ -0.69
TSPO-201ENST00000329563 K7EQM0 130 aa10.76□□□□□ -0.69
TSPO-201ENST00000329563 SLC25A5P05141 298 aaKnown RBP10.76□□□□□ -0.69
TSPO-201ENST00000329563 NDUFA5Q16718 116 aa10.76□□□□□ -0.69
TSPO-201ENST00000329563 EXOC3-AS1Q8N2X6 119 aa10.76□□□□□ -0.69
TSPO-201ENST00000329563 HIST1H2BAQ96A08 127 aa10.76□□□□□ -0.69
TSPO-201ENST00000329563 RPUSD4Q96CM3 377 aaKnown RBP10.76□□□□□ -0.69
TSPO-201ENST00000329563 GGTLC3B5MD39 225 aa10.75□□□□□ -0.69
TSPO-201ENST00000329563 TOR2AQ5JU69 321 aa10.75□□□□□ -0.69
TSPO-201ENST00000329563 UQCC3Q6UW78 93 aa10.75□□□□□ -0.69
TSPO-201ENST00000329563 CCDC28AQ8IWP9 274 aa10.75□□□□□ -0.69
TSPO-201ENST00000329563 ZNF738Q8NE65 137 aa10.75□□□□□ -0.69
TSPO-201ENST00000329563 LINC00052Q96N35 136 aa10.75□□□□□ -0.69
TSPO-201ENST00000329563 EPDR1Q9UM22 224 aa10.75□□□□□ -0.69
TSPO-201ENST00000329563 FBLL1A6NHQ2 334 aaKnown RBP10.74□□□□□ -0.69
TSPO-201ENST00000329563 TMEM250H0YL14 139 aa10.74□□□□□ -0.69
TSPO-201ENST00000329563 ZNF688P0C7X2 276 aa10.74□□□□□ -0.69
TSPO-201ENST00000329563 ATP5G3P48201 142 aa10.74□□□□□ -0.69
TSPO-201ENST00000329563 EIF4E3Q8N5X7 224 aaKnown RBP10.74□□□□□ -0.69
TSPO-201ENST00000329563 RARRES2Q99969 163 aa10.74□□□□□ -0.69
TSPO-201ENST00000329563 ATG101Q9BSB4 218 aa10.74□□□□□ -0.69
TSPO-201ENST00000329563 CSTL1Q9H114 145 aa10.74□□□□□ -0.69
TSPO-201ENST00000329563 RBAKDNA6NC62 111 aa10.73□□□□□ -0.69
TSPO-201ENST00000329563 S100A9P06702 114 aaKnown RBP10.73□□□□□ -0.69
TSPO-201ENST00000329563 DEFB131AP59861 70 aa10.73□□□□□ -0.69
TSPO-201ENST00000329563 PSMG4Q5JS54 123 aa10.73□□□□□ -0.69
TSPO-201ENST00000329563 EBLN2Q6P2I7 272 aa10.73□□□□□ -0.69
TSPO-201ENST00000329563 RNF182Q8N6D2 247 aa10.73□□□□□ -0.69
TSPO-201ENST00000329563 FRAS1Q86XX4 4008 aa10.72□□□□□ -0.69
TSPO-201ENST00000329563 DIRC3C9JPN6 131 aa10.72□□□□□ -0.69
TSPO-201ENST00000329563 M0R3E3 92 aa10.72□□□□□ -0.69
TSPO-201ENST00000329563 PEX7O00628 323 aa10.72□□□□□ -0.69
TSPO-201ENST00000329563 TCRAP04437 139 aa10.72□□□□□ -0.69
TSPO-201ENST00000329563 IGFL4Q6B9Z1 124 aa10.72□□□□□ -0.69
TSPO-201ENST00000329563 COMMD7Q86VX2 200 aa10.72□□□□□ -0.69
TSPO-201ENST00000329563 CYB561D1Q8N8Q1 229 aa10.72□□□□□ -0.69
TSPO-201ENST00000329563 OR10J6PQ8NGY7 276 aa10.72□□□□□ -0.69
TSPO-201ENST00000329563 PHLDA1Q8WV24 401 aaPredicted RBP10.72□□□□□ -0.69
TSPO-201ENST00000329563 C11orf52Q96A22 123 aa10.72□□□□□ -0.69
TSPO-201ENST00000329563 KMT2AQ03164 3969 aa10.72□□□□□ -0.69
TSPO-201ENST00000329563 DUSP14O95147 198 aaKnown RBP10.71□□□□□ -0.69
TSPO-201ENST00000329563 GIG44P09565 113 aaPredicted RBP10.71□□□□□ -0.69
TSPO-201ENST00000329563 HLA-DMBP28068 263 aa10.71□□□□□ -0.69
TSPO-201ENST00000329563 CNN1P51911 297 aaKnown RBP10.71□□□□□ -0.69
TSPO-201ENST00000329563 FOXI2Q6ZQN5 318 aa10.71□□□□□ -0.69
TSPO-201ENST00000329563 C20orf173Q96LM9 149 aa10.71□□□□□ -0.69
TSPO-201ENST00000329563 SLC35B3Q9H1N7 401 aa10.71□□□□□ -0.69
TSPO-201ENST00000329563 TREM1Q9NP99 234 aa10.71□□□□□ -0.69
TSPO-201ENST00000329563 ZNF705FA8MVS1 300 aaPredicted RBP10.7□□□□□ -0.7
TSPO-201ENST00000329563 AKR1C3P42330 323 aa10.7□□□□□ -0.7
TSPO-201ENST00000329563 LGALS9CQ6DKI2 356 aa10.7□□□□□ -0.7
TSPO-201ENST00000329563 GOLT1AQ6ZVE7 132 aa10.7□□□□□ -0.7
TSPO-201ENST00000329563 OR8A1Q8NGG7 326 aa10.7□□□□□ -0.7
TSPO-201ENST00000329563 LINC00477Q96M19 166 aa10.7□□□□□ -0.7
TSPO-201ENST00000329563 C11orf68Q9H3H3 251 aaKnown RBP10.7□□□□□ -0.7
TSPO-201ENST00000329563 RPH3ALQ9UNE2 315 aa10.7□□□□□ -0.7
TSPO-201ENST00000329563 CA1P00915 261 aaPredicted RBP10.69□□□□□ -0.7
TSPO-201ENST00000329563 SRP19P09132 144 aaKnown RBP10.69□□□□□ -0.7
TSPO-201ENST00000329563 TCTAP57738 103 aa10.69□□□□□ -0.7
TSPO-201ENST00000329563 UBE2G1P62253 170 aa10.69□□□□□ -0.7
TSPO-201ENST00000329563 TMEM78Q5T7P6 136 aa10.69□□□□□ -0.7
TSPO-201ENST00000329563 TMEM75Q8N9X5 138 aa10.69□□□□□ -0.7
TSPO-201ENST00000329563 C11orf45Q8TAV5 145 aa10.69□□□□□ -0.7
TSPO-201ENST00000329563 FMC1Q96HJ9 113 aa10.69□□□□□ -0.7
TSPO-201ENST00000329563 SAV1Q9H4B6 383 aaPredicted RBP10.69□□□□□ -0.7
TSPO-201ENST00000329563 KLF12Q9Y4X4 402 aa10.69□□□□□ -0.7
TSPO-201ENST00000329563 A0A0J9YX75 114 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 TRBV6-1A0A0K0K1D8 114 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 SCO2A0A1W2PP80 73 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 KNCNA6PVL3 124 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 DEFB4AO15263 64 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 TAS2R60P59551 318 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 GNG5P63218 68 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 TMEM183BQ1AE95 376 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 FAM74A3Q4VXF1 159 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 C9orf47Q6ZRZ4 202 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 TRPT1Q86TN4 253 aaKnown RBP10.68□□□□□ -0.7
TSPO-201ENST00000329563 OR11H2Q8NH07 326 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 C2CD4CQ8TF44 421 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 CLUHP3Q96NS8 147 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 PPP1R14DQ9NXH3 145 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 LENEPQ9Y5L5 61 aa10.68□□□□□ -0.7
TSPO-201ENST00000329563 TRBV7-9A0A0J9YWB2 115 aa10.67□□□□□ -0.7
TSPO-201ENST00000329563 NPIPB6E9PJ23 425 aa10.67□□□□□ -0.7
TSPO-201ENST00000329563 HLA-DRB4P13762 266 aa10.67□□□□□ -0.7
TSPO-201ENST00000329563 SRSF3P84103 164 aaKnown RBP10.67□□□□□ -0.7
TSPO-201ENST00000329563 HIST1H1AQ02539 215 aaPredicted RBP10.67□□□□□ -0.7
TSPO-201ENST00000329563 SAPCD1Q5SSQ6 148 aa10.67□□□□□ -0.7
TSPO-201ENST00000329563 ZFP30Q9Y2G7 519 aa10.67□□□□□ -0.7
TSPO-201ENST00000329563 HLA-DRB4X5D2U9 266 aa10.67□□□□□ -0.7
TSPO-201ENST00000329563 AGRNO00468 2067 aa10.66□□□□□ -0.7
TSPO-201ENST00000329563 IGKV2-40A0A087WW87 121 aaPredicted RBP10.66□□□□□ -0.7
TSPO-201ENST00000329563 PRAC2D3DTV9 90 aa10.66□□□□□ -0.7
TSPO-201ENST00000329563 IGKV2D-40P01614 121 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms