RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 UBE2BP63146 152 aa12.34□□□□□ -0.43
PTPN21-201ENST00000328736 C9orf153Q5TBE3 101 aa12.34□□□□□ -0.43
PTPN21-201ENST00000328736 FNDC1Q4ZHG4 1894 aaPredicted RBP12.33□□□□□ -0.43
PTPN21-201ENST00000328736 H3BUA1 57 aa12.33□□□□□ -0.43
PTPN21-201ENST00000328736 LMO1P25800 156 aa12.33□□□□□ -0.43
PTPN21-201ENST00000328736 FHL1Q13642 323 aa12.33□□□□□ -0.43
PTPN21-201ENST00000328736 LINC00311Q8N616 119 aa12.33□□□□□ -0.43
PTPN21-201ENST00000328736 FREM3P0C091 2139 aa12.33□□□□□ -0.44
PTPN21-201ENST00000328736 IGHV3-38A0A0C4DH36 116 aa12.33□□□□□ -0.44
PTPN21-201ENST00000328736 LINC00479Q96M42 142 aa12.33□□□□□ -0.44
PTPN21-201ENST00000328736 MPDZO75970 2070 aa12.33□□□□□ -0.44
PTPN21-201ENST00000328736 HAMPP81172 84 aa12.33□□□□□ -0.44
PTPN21-201ENST00000328736 STPG4Q8N801 248 aa12.33□□□□□ -0.44
PTPN21-201ENST00000328736 TRAV12-2A0A075B6T6 113 aa12.32□□□□□ -0.44
PTPN21-201ENST00000328736 IGHV7-4-1A0A0J9YVY3 117 aa12.32□□□□□ -0.44
PTPN21-201ENST00000328736 REG4Q9BYZ8 158 aa12.32□□□□□ -0.44
PTPN21-201ENST00000328736 NDUFA12Q9UI09 145 aa12.32□□□□□ -0.44
PTPN21-201ENST00000328736 GTSF1LQ9H1H1 148 aa12.32□□□□□ -0.44
PTPN21-201ENST00000328736 TSSC4Q9Y5U2 329 aaPredicted RBP12.32□□□□□ -0.44
PTPN21-201ENST00000328736 ARHGEF17Q96PE2 2063 aaPredicted RBP12.32□□□□□ -0.44
PTPN21-201ENST00000328736 RHOHQ15669 191 aa12.32□□□□□ -0.44
PTPN21-201ENST00000328736 KIF26BQ2KJY2 2108 aa12.32□□□□□ -0.44
PTPN21-201ENST00000328736 COX11Q9Y6N1 276 aa12.32□□□□□ -0.44
PTPN21-201ENST00000328736 MRPL51Q4U2R6 128 aaKnown RBP12.31□□□□□ -0.44
PTPN21-201ENST00000328736 RLFQ13129 1914 aa12.31□□□□□ -0.44
PTPN21-201ENST00000328736 TCF20Q9UGU0 1960 aaKnown RBP12.31□□□□□ -0.44
PTPN21-201ENST00000328736 TEX36Q5VZQ5 186 aa12.31□□□□□ -0.44
PTPN21-201ENST00000328736 Q6ZRM9 215 aa12.31□□□□□ -0.44
PTPN21-201ENST00000328736 NDUFS5O43920 106 aa12.31□□□□□ -0.44
PTPN21-201ENST00000328736 ARTNQ5T4W7 220 aa12.3□□□□□ -0.44
PTPN21-201ENST00000328736 ATP6V0BQ99437 205 aa12.3□□□□□ -0.44
PTPN21-201ENST00000328736 DKK4Q9UBT3 224 aa12.3□□□□□ -0.44
PTPN21-201ENST00000328736 IGKV2D-24A0A075B6R9 120 aa12.3□□□□□ -0.44
PTPN21-201ENST00000328736 ZNF524Q96C55 264 aa12.3□□□□□ -0.44
PTPN21-201ENST00000328736 PRR25Q96S07 402 aa12.3□□□□□ -0.44
PTPN21-201ENST00000328736 TICRRQ7Z2Z1 1910 aa12.3□□□□□ -0.44
PTPN21-201ENST00000328736 TEX48A0A1B0GUV7 120 aa12.3□□□□□ -0.44
PTPN21-201ENST00000328736 C17orf58Q2M2W7 97 aa12.29□□□□□ -0.44
PTPN21-201ENST00000328736 DUX4L9Q6RFH8 374 aaPredicted RBP12.29□□□□□ -0.44
PTPN21-201ENST00000328736 Q71RC1 249 aaPredicted RBP12.29□□□□□ -0.44
PTPN21-201ENST00000328736 SDK2Q58EX2 2172 aa12.29□□□□□ -0.44
PTPN21-201ENST00000328736 FOXI2Q6ZQN5 318 aa12.29□□□□□ -0.44
PTPN21-201ENST00000328736 IGHG4P01861 327 aa12.29□□□□□ -0.44
PTPN21-201ENST00000328736 LOXP28300 417 aaPredicted RBP12.29□□□□□ -0.44
PTPN21-201ENST00000328736 APC2O95996 2303 aa12.29□□□□□ -0.44
PTPN21-201ENST00000328736 A0A096LPF7 62 aa12.28□□□□□ -0.44
PTPN21-201ENST00000328736 hADV29S1A0JD25 119 aa12.28□□□□□ -0.44
PTPN21-201ENST00000328736 ZNF124Q15973 351 aa12.28□□□□□ -0.44
PTPN21-201ENST00000328736 IGKV1OR2-108A0A075B7D4 117 aa12.28□□□□□ -0.44
PTPN21-201ENST00000328736 TRAV26-2A0A0B4J265 109 aa12.28□□□□□ -0.44
PTPN21-201ENST00000328736 C18orf32Q8TCD1 76 aa12.28□□□□□ -0.44
PTPN21-201ENST00000328736 MRPL53Q96EL3 112 aaKnown RBP12.28□□□□□ -0.44
PTPN21-201ENST00000328736 PTPRDP23468 1912 aa12.28□□□□□ -0.44
PTPN21-201ENST00000328736 IGKV1-39P01597 117 aa12.28□□□□□ -0.44
PTPN21-201ENST00000328736 IGKV1D-39P04432 117 aa12.28□□□□□ -0.44
PTPN21-201ENST00000328736 FGF6P10767 208 aa12.27□□□□□ -0.44
PTPN21-201ENST00000328736 PPDPFLQ8WWR9 84 aa12.27□□□□□ -0.44
PTPN21-201ENST00000328736 PYGO2Q9BRQ0 406 aa12.27□□□□□ -0.44
PTPN21-201ENST00000328736 MORN5Q5VZ52 161 aa12.27□□□□□ -0.44
PTPN21-201ENST00000328736 C20orf78Q9BR46 151 aa12.27□□□□□ -0.44
PTPN21-201ENST00000328736 TRIOBPQ9H2D6 2365 aa12.27□□□□□ -0.45
PTPN21-201ENST00000328736 ASPHD1Q5U4P2 390 aa12.27□□□□□ -0.45
PTPN21-201ENST00000328736 FAM231DQ6ZW35 169 aa12.27□□□□□ -0.45
PTPN21-201ENST00000328736 C9orf66Q5T8R8 295 aa12.27□□□□□ -0.45
PTPN21-201ENST00000328736 MED12Q93074 2177 aa12.26□□□□□ -0.45
PTPN21-201ENST00000328736 LGALS9BQ3B8N2 356 aa12.26□□□□□ -0.45
PTPN21-201ENST00000328736 LGALS9CQ6DKI2 356 aa12.26□□□□□ -0.45
PTPN21-201ENST00000328736 IGKV1-6A0A0C4DH72 117 aa12.25□□□□□ -0.45
PTPN21-201ENST00000328736 MRAPQ8TCY5 172 aa12.25□□□□□ -0.45
PTPN21-201ENST00000328736 ESPL1Q14674 2120 aa12.25□□□□□ -0.45
PTPN21-201ENST00000328736 VPREB3Q9UKI3 123 aa12.25□□□□□ -0.45
PTPN21-201ENST00000328736 SMIM27A0A1W2PRY6 76 aa12.25□□□□□ -0.45
PTPN21-201ENST00000328736 ZNF503-AS2A6NEH8 195 aa12.25□□□□□ -0.45
PTPN21-201ENST00000328736 ADCYAP1P18509 176 aa12.25□□□□□ -0.45
PTPN21-201ENST00000328736 CLPSL2Q6UWE3 100 aa12.25□□□□□ -0.45
PTPN21-201ENST00000328736 VOPP1Q96AW1 172 aa12.25□□□□□ -0.45
PTPN21-201ENST00000328736 C9orf118A6NHY6 69 aa12.25□□□□□ -0.45
PTPN21-201ENST00000328736 BOD1L2Q8IYS8 172 aa12.25□□□□□ -0.45
PTPN21-201ENST00000328736 RSPO3Q9BXY4 272 aaPredicted RBP12.25□□□□□ -0.45
PTPN21-201ENST00000328736 PRO1854Q9UHT4 67 aa12.24□□□□□ -0.45
PTPN21-201ENST00000328736 CEP290O15078 2479 aa12.24□□□□□ -0.45
PTPN21-201ENST00000328736 K7EM74 188 aa12.24□□□□□ -0.45
PTPN21-201ENST00000328736 FAM120AOSQ5T036 256 aa12.24□□□□□ -0.45
PTPN21-201ENST00000328736 PRSS57Q6UWY2 283 aa12.24□□□□□ -0.45
PTPN21-201ENST00000328736 TSC2P49815 1807 aa12.24□□□□□ -0.45
PTPN21-201ENST00000328736 MGAMO43451 1857 aa12.24□□□□□ -0.45
PTPN21-201ENST00000328736 Q6ZR03 302 aa12.24□□□□□ -0.45
PTPN21-201ENST00000328736 CFHR4Q92496 578 aa12.24□□□□□ -0.45
PTPN21-201ENST00000328736 NOP10Q9NPE3 64 aaKnown RBP12.24□□□□□ -0.45
PTPN21-201ENST00000328736 F8W1H4 67 aa12.24□□□□□ -0.45
PTPN21-201ENST00000328736 ZNF664Q8N3J9 261 aa12.24□□□□□ -0.45
PTPN21-201ENST00000328736 TRACP01848 142 aa12.23□□□□□ -0.45
PTPN21-201ENST00000328736 A0A1B0GUS0 222 aa12.23□□□□□ -0.45
PTPN21-201ENST00000328736 C1orf43Q9BWL3 253 aa12.23□□□□□ -0.45
PTPN21-201ENST00000328736 CARD19Q96LW7 228 aa12.23□□□□□ -0.45
PTPN21-201ENST00000328736 CCL24O00175 119 aa12.23□□□□□ -0.45
PTPN21-201ENST00000328736 CRYGCP07315 174 aa12.23□□□□□ -0.45
PTPN21-201ENST00000328736 IGLV3-9A0A075B6K5 115 aa12.23□□□□□ -0.45
PTPN21-201ENST00000328736 LY6G6EA0A0G2JKS1 128 aa12.23□□□□□ -0.45
PTPN21-201ENST00000328736 A0A0J9YY99 117 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms