RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 GAGE2DQ9UEU5 116 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 FAM120AOSQ5T036 256 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 C10orf91Q5T1B1 145 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 ZFAND6Q6FIF0 208 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 FXYD5Q96DB9 178 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 LSM4Q9Y4Z0 139 aaKnown RBP9.03□□□□□ -0.96
COL4A5-201ENST00000328300 EVI2AP22794 236 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 HAPLN4Q86UW8 402 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 ZNF664Q8N3J9 261 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 CSTL1Q9H114 145 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 C11orf68Q9H3H3 251 aaKnown RBP9.03□□□□□ -0.96
COL4A5-201ENST00000328300 LOXL1Q08397 574 aaPredicted RBP9.02□□□□□ -0.96
COL4A5-201ENST00000328300 NAA38Q9BRA0 125 aaKnown RBP9.02□□□□□ -0.96
COL4A5-201ENST00000328300 FAM104BQ5XKR9 115 aa9.02□□□□□ -0.97
COL4A5-201ENST00000328300 K7EMI3 77 aa9.02□□□□□ -0.97
COL4A5-201ENST00000328300 Q8N8P6 123 aa9.02□□□□□ -0.97
COL4A5-201ENST00000328300 C14orf178Q8N769 122 aaPredicted RBP9.02□□□□□ -0.97
COL4A5-201ENST00000328300 HEATR5AQ86XA9 2040 aa9.02□□□□□ -0.97
COL4A5-201ENST00000328300 LRRK1Q38SD2 2015 aa9.02□□□□□ -0.97
COL4A5-201ENST00000328300 IGLV11-55A0A075B6I3 123 aa9.02□□□□□ -0.97
COL4A5-201ENST00000328300 TRAV8-1A0A0A6YYK1 113 aa9.02□□□□□ -0.97
COL4A5-201ENST00000328300 ZNF726P1Q15940 193 aa9.02□□□□□ -0.97
COL4A5-201ENST00000328300 LY6G5BQ8NDX9 201 aa9.02□□□□□ -0.97
COL4A5-201ENST00000328300 FER1L5A0AVI2 2057 aa9.02□□□□□ -0.97
COL4A5-201ENST00000328300 IGHV4-30-2A0A087WSY4 118 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 IGLV1-47P01700 117 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 C3orf79P0CE67 100 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 SS18Q15532 418 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 OVOL2Q9BRP0 275 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 PYGO2Q9BRQ0 406 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 SMIM27A0A1W2PRY6 76 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 K7EMT4 169 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 ESDP10768 282 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 DIAPH2-AS1Q14236 149 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 BCL6BQ8N143 479 aaPredicted RBP9.01□□□□□ -0.97
COL4A5-201ENST00000328300 LYPD6BQ8NI32 183 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 GGTLC3B5MD39 225 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 CRYGCP07315 174 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 MPV17L2Q567V2 206 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 TRAV25A0A0B4J276 109 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 ERG28Q9UKR5 140 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 TNFRSF6BO95407 300 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 ADCYAP1P18509 176 aa9.01□□□□□ -0.97
COL4A5-201ENST00000328300 IGHV7-81A0A0B4J1V7 117 aa9□□□□□ -0.97
COL4A5-201ENST00000328300 LTAP01374 205 aa9□□□□□ -0.97
COL4A5-201ENST00000328300 C9orf66Q5T8R8 295 aa9□□□□□ -0.97
COL4A5-201ENST00000328300 SIRPDQ9H106 197 aa9□□□□□ -0.97
COL4A5-201ENST00000328300 hDV102S1A0JD36 115 aa9□□□□□ -0.97
COL4A5-201ENST00000328300 I3L2K1 104 aa9□□□□□ -0.97
COL4A5-201ENST00000328300 I3L3M4 83 aa9□□□□□ -0.97
COL4A5-201ENST00000328300 ATXN8Q156A1 80 aa9□□□□□ -0.97
COL4A5-201ENST00000328300 UBE2E2Q96LR5 201 aa9□□□□□ -0.97
COL4A5-201ENST00000328300 TECTAO75443 2155 aa9□□□□□ -0.97
COL4A5-201ENST00000328300 A0A087X0K7 114 aa9□□□□□ -0.97
COL4A5-201ENST00000328300 MYMXA0A1B0GTQ4 84 aa9□□□□□ -0.97
COL4A5-201ENST00000328300 NCR2O95944 276 aa9□□□□□ -0.97
COL4A5-201ENST00000328300 IGHV4-59P01825 116 aa8.99□□□□□ -0.97
COL4A5-201ENST00000328300 CD300EQ496F6 205 aaPredicted RBP8.99□□□□□ -0.97
COL4A5-201ENST00000328300 PRSS57Q6UWY2 283 aa8.99□□□□□ -0.97
COL4A5-201ENST00000328300 C20orf78Q9BR46 151 aa8.99□□□□□ -0.97
COL4A5-201ENST00000328300 EREGO14944 169 aa8.99□□□□□ -0.97
COL4A5-201ENST00000328300 DAD1P61803 113 aa8.99□□□□□ -0.97
COL4A5-201ENST00000328300 IGKV3D-20A0A0C4DH25 116 aa8.99□□□□□ -0.97
COL4A5-201ENST00000328300 C5orf56Q8N8D9 126 aa8.99□□□□□ -0.97
COL4A5-201ENST00000328300 GTSF1LQ9H1H1 148 aa8.99□□□□□ -0.97
COL4A5-201ENST00000328300 A8MWP6 167 aa8.99□□□□□ -0.97
COL4A5-201ENST00000328300 MAPK1IP1LQ8NDC0 245 aa8.99□□□□□ -0.97
COL4A5-201ENST00000328300 WFDC12Q8WWY7 111 aa8.99□□□□□ -0.97
COL4A5-201ENST00000328300 RMI2Q96E14 147 aa8.99□□□□□ -0.97
COL4A5-201ENST00000328300 V9GYV3 84 aa8.99□□□□□ -0.97
COL4A5-201ENST00000328300 IGFL4Q6B9Z1 124 aa8.98□□□□□ -0.97
COL4A5-201ENST00000328300 SYS1-DBNDD2H3BUS1 97 aa8.98□□□□□ -0.97
COL4A5-201ENST00000328300 DEFB121Q5J5C9 76 aa8.98□□□□□ -0.97
COL4A5-201ENST00000328300 TMEM158Q8WZ71 300 aa8.98□□□□□ -0.97
COL4A5-201ENST00000328300 TRBV25-1A0A075B6N4 114 aa8.98□□□□□ -0.97
COL4A5-201ENST00000328300 M0R2P5 195 aa8.98□□□□□ -0.97
COL4A5-201ENST00000328300 NDUFS7O75251 213 aa8.98□□□□□ -0.97
COL4A5-201ENST00000328300 AMN1Q8IY45 258 aa8.98□□□□□ -0.97
COL4A5-201ENST00000328300 RIF1Q5UIP0 2472 aaKnown RBP8.98□□□□□ -0.97
COL4A5-201ENST00000328300 GAGE12BA1L429 117 aa8.98□□□□□ -0.97
COL4A5-201ENST00000328300 HOXD3P31249 432 aaPredicted RBP8.98□□□□□ -0.97
COL4A5-201ENST00000328300 NEGR1Q7Z3B1 354 aa8.98□□□□□ -0.97
COL4A5-201ENST00000328300 WIPF2Q8TF74 440 aaPredicted RBP8.98□□□□□ -0.97
COL4A5-201ENST00000328300 CITED2Q99967 270 aaPredicted RBP8.98□□□□□ -0.97
COL4A5-201ENST00000328300 CD5LO43866 347 aa8.97□□□□□ -0.97
COL4A5-201ENST00000328300 MYCNOSP40205 109 aa8.97□□□□□ -0.97
COL4A5-201ENST00000328300 SPRNQ5BIV9 151 aa8.97□□□□□ -0.97
COL4A5-201ENST00000328300 SELENOKQ9Y6D0 94 aa8.97□□□□□ -0.97
COL4A5-201ENST00000328300 KIR3DS1Q14943 382 aa8.97□□□□□ -0.97
COL4A5-201ENST00000328300 Q8N9W7 124 aa8.97□□□□□ -0.97
COL4A5-201ENST00000328300 AZU1P20160 251 aa8.97□□□□□ -0.97
COL4A5-201ENST00000328300 SPINK13Q1W4C9 94 aa8.97□□□□□ -0.97
COL4A5-201ENST00000328300 IGLV2-23P01705 113 aa8.97□□□□□ -0.97
COL4A5-201ENST00000328300 C8orf49Q96NF6 230 aa8.97□□□□□ -0.97
COL4A5-201ENST00000328300 CCL24O00175 119 aa8.97□□□□□ -0.97
COL4A5-201ENST00000328300 TNFRSF13BO14836 293 aaPredicted RBP8.97□□□□□ -0.97
COL4A5-201ENST00000328300 IGHG2P01859 326 aa8.97□□□□□ -0.97
COL4A5-201ENST00000328300 FXYD7P58549 80 aa8.97□□□□□ -0.97
COL4A5-201ENST00000328300 SSBP2P81877 361 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms