RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 A0A096LNJ9 63 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 NPIPB11E5RHQ5 1161 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 PF4V1P10720 104 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 IFI27P40305 119 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-201ENST00000318023 TCF19Q9Y242 345 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 MXRA5Q9NR99 2828 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 TRBV6-6A0A0A6YYG2 114 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 hADV38S2A0JD32 116 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 FCER1GP30273 86 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 PRR20EP86478 221 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 PRR20CP86479 221 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 PRR20DP86480 221 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 PRR20BP86481 221 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 PRR20AP86496 221 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 ZNF562Q6V9R5 426 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 NUP37Q8NFH4 326 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 ITLN1Q8WWA0 313 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 ZNF414Q96IQ9 312 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 TMEM140Q9NV12 185 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 TMSB15BA0A087X1C1 80 aa7.44□□□□□ -1.22
CAPN3-201ENST00000318023 C17orf100A8MU93 164 aa7.44□□□□□ -1.22
CAPN3-201ENST00000318023 PEX7O00628 323 aa7.44□□□□□ -1.22
CAPN3-201ENST00000318023 FCGR3BO75015 233 aa7.44□□□□□ -1.22
CAPN3-201ENST00000318023 TGFAP01135 160 aa7.44□□□□□ -1.22
CAPN3-201ENST00000318023 TNFAIP6P98066 277 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-201ENST00000318023 ZNF826PQ6ZT77 177 aa7.44□□□□□ -1.22
CAPN3-201ENST00000318023 FABP5P3A8MUU1 101 aa7.44□□□□□ -1.22
CAPN3-201ENST00000318023 IGHV1-46P01743 117 aa7.44□□□□□ -1.22
CAPN3-201ENST00000318023 PRB4P10163 310 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-201ENST00000318023 GNG3P63215 75 aa7.44□□□□□ -1.22
CAPN3-201ENST00000318023 RPP21Q9H633 154 aaKnown RBP7.44□□□□□ -1.22
CAPN3-201ENST00000318023 SLC25A10Q9UBX3 287 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-201ENST00000318023 GAGE12JA6NER3 117 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 GAGE7O76087 117 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 IGHV3-13P01766 116 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 TFF1P04155 84 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 GAGE12FP0CL80 117 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 GAGE12GP0CL81 117 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 GAGE12IP0CL82 117 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 MYOD1P15172 320 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 SMCPP49901 116 aaPredicted RBP7.43□□□□□ -1.22
CAPN3-201ENST00000318023 GAGE4Q13068 117 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 IGKV1OR2-108A0A075B7D4 117 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 OR2H2O95918 312 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 PRB3Q04118 309 aaPredicted RBP7.43□□□□□ -1.22
CAPN3-201ENST00000318023 MOGAT3Q86VF5 341 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 CEND1Q8N111 149 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 RFESDQ8TAC1 157 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 C7orf69Q9H7B7 122 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 VPREB3Q9UKI3 123 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 TRBV25-1A0A075B6N4 114 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 P01737 135 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 ERVK11-1P61568 191 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 ZNF497Q6ZNH5 498 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.43□□□□□ -1.22
CAPN3-201ENST00000318023 Q8TCH9 128 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 AJUBAQ96IF1 538 aa7.43□□□□□ -1.22
CAPN3-201ENST00000318023 FAM90A9PA6NNJ1 464 aa7.42□□□□□ -1.22
CAPN3-201ENST00000318023 MLANAQ16655 118 aa7.42□□□□□ -1.22
CAPN3-201ENST00000318023 C12orf74Q32Q52 190 aa7.42□□□□□ -1.22
CAPN3-201ENST00000318023 LGALS9BQ3B8N2 356 aa7.42□□□□□ -1.22
CAPN3-201ENST00000318023 LGALS9CQ6DKI2 356 aa7.42□□□□□ -1.22
CAPN3-201ENST00000318023 OR5AN1Q8NGI8 311 aa7.42□□□□□ -1.22
CAPN3-201ENST00000318023 PIMREGQ9BSJ6 248 aa7.42□□□□□ -1.22
CAPN3-201ENST00000318023 TPPP3Q9BW30 176 aa7.42□□□□□ -1.22
CAPN3-201ENST00000318023 A0A087WX48 190 aa7.42□□□□□ -1.22
CAPN3-201ENST00000318023 EIF4EBP1Q13541 118 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-201ENST00000318023 IGFBPL1Q8WX77 278 aa7.42□□□□□ -1.22
CAPN3-201ENST00000318023 CXXC4Q9H2H0 198 aa7.42□□□□□ -1.22
CAPN3-201ENST00000318023 C12orf77C9JDV5 145 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 SLC25A5P05141 298 aaKnown RBP7.41□□□□□ -1.22
CAPN3-201ENST00000318023 Q6P435 159 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 RBPMS2Q6ZRY4 209 aaKnown RBP7.41□□□□□ -1.22
CAPN3-201ENST00000318023 ZNF329Q86UD4 541 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 OR9G1Q8NH87 305 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 C10orf105Q8TEF2 133 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 IGHV3OR15-7A0A075B7D8 119 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 IGHV3OR16-10A0A075B7F0 116 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 C8orf88P0DMB2 117 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 NDUFV3P56181 108 aaKnown RBP7.41□□□□□ -1.22
CAPN3-201ENST00000318023 POLDIP2Q9Y2S7 368 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-201ENST00000318023 CT45A10P0DMU9 189 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 FAM159AQ6UWV7 190 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 GTSCR1Q86UQ5 136 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 CARD19Q96LW7 228 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 SLC25A33Q9BSK2 321 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 SLC25A2Q9BXI2 301 aa7.41□□□□□ -1.22
CAPN3-201ENST00000318023 H3BTX0 84 aa7.4□□□□□ -1.22
CAPN3-201ENST00000318023 MOSP00540 346 aa7.4□□□□□ -1.22
CAPN3-201ENST00000318023 RRN3P1Q2M238 152 aa7.4□□□□□ -1.22
CAPN3-201ENST00000318023 CFAP126Q5VTH2 177 aa7.4□□□□□ -1.22
CAPN3-201ENST00000318023 RAX2Q96IS3 184 aa7.4□□□□□ -1.22
CAPN3-201ENST00000318023 ASCL2Q99929 193 aa7.4□□□□□ -1.22
CAPN3-201ENST00000318023 IGLV3-9A0A075B6K5 115 aa7.4□□□□□ -1.23
CAPN3-201ENST00000318023 ARMS2P0C7Q2 107 aa7.4□□□□□ -1.23
CAPN3-201ENST00000318023 IFI27L1Q96BM0 104 aa7.4□□□□□ -1.23
CAPN3-201ENST00000318023 DAZAP1Q96EP5 407 aaKnown RBP7.4□□□□□ -1.23
CAPN3-201ENST00000318023 KRTAP27-1Q3LI81 207 aa7.39□□□□□ -1.23
CAPN3-201ENST00000318023 LRRC75A-AS1Q8N1F1 130 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms