RNA–Protein interactions for RNA: ENST00000311052.9

CARHSP1-201, Transcript of calcium regulated heat stable protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARHSP1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-201ENST00000311052 FAM19A4Q96LR4 140 aa12.82□□□□□ -0.36
CARHSP1-201ENST00000311052 PSMG3Q9BT73 122 aaPredicted RBP12.82□□□□□ -0.36
CARHSP1-201ENST00000311052 HYDINQ4G0P3 5121 aa12.81□□□□□ -0.36
CARHSP1-201ENST00000311052 IGKV2-40A0A087WW87 121 aaPredicted RBP12.81□□□□□ -0.36
CARHSP1-201ENST00000311052 IGKV2D-40P01614 121 aaPredicted RBP12.81□□□□□ -0.36
CARHSP1-201ENST00000311052 TMEM78Q5T7P6 136 aa12.81□□□□□ -0.36
CARHSP1-201ENST00000311052 CCDC28AQ8IWP9 274 aa12.81□□□□□ -0.36
CARHSP1-201ENST00000311052 RNASE8Q8TDE3 154 aaKnown RBP12.81□□□□□ -0.36
CARHSP1-201ENST00000311052 TMEM263Q8WUH6 116 aaKnown RBP12.81□□□□□ -0.36
CARHSP1-201ENST00000311052 NDUFAF3Q9BU61 184 aa12.81□□□□□ -0.36
CARHSP1-201ENST00000311052 Q9H3A6 140 aa12.81□□□□□ -0.36
CARHSP1-201ENST00000311052 TNFSF18Q9UNG2 199 aa12.81□□□□□ -0.36
CARHSP1-201ENST00000311052 TIMM8BQ9Y5J9 83 aaPredicted RBP12.81□□□□□ -0.36
CARHSP1-201ENST00000311052 TRAV12-3A0A0B4J271 114 aa12.8□□□□□ -0.36
CARHSP1-201ENST00000311052 RNF222A6NCQ9 220 aa12.8□□□□□ -0.36
CARHSP1-201ENST00000311052 KLLNB2CW77 178 aa12.8□□□□□ -0.36
CARHSP1-201ENST00000311052 NMBP08949 121 aa12.8□□□□□ -0.36
CARHSP1-201ENST00000311052 CRISP2P16562 243 aa12.8□□□□□ -0.36
CARHSP1-201ENST00000311052 ATP6V0CP27449 155 aa12.8□□□□□ -0.36
CARHSP1-201ENST00000311052 SERF2P84101 59 aa12.8□□□□□ -0.36
CARHSP1-201ENST00000311052 VGLL1Q99990 258 aa12.8□□□□□ -0.36
CARHSP1-201ENST00000311052 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
CARHSP1-201ENST00000311052 DNAH1Q9P2D7 4330 aa12.79□□□□□ -0.36
CARHSP1-201ENST00000311052 C7orf71A4D174 169 aa12.79□□□□□ -0.36
CARHSP1-201ENST00000311052 RBAKDNA6NC62 111 aa12.79□□□□□ -0.36
CARHSP1-201ENST00000311052 EIF3GO75821 320 aaKnown RBP eCLIP12.79□□□□□ -0.36
CARHSP1-201ENST00000311052 MBP02144 154 aa12.79□□□□□ -0.36
CARHSP1-201ENST00000311052 DEFB130BP0DP73 79 aa12.79□□□□□ -0.36
CARHSP1-201ENST00000311052 DEFB130AP0DP74 79 aa12.79□□□□□ -0.36
CARHSP1-201ENST00000311052 HTN3P15516 51 aa12.79□□□□□ -0.36
CARHSP1-201ENST00000311052 ZNF492Q9P255 531 aa12.79□□□□□ -0.36
CARHSP1-201ENST00000311052 BORCS7-ASMTA0A0B4J1R7 106 aa12.78□□□□□ -0.36
CARHSP1-201ENST00000311052 G3V3Q6 166 aa12.78□□□□□ -0.36
CARHSP1-201ENST00000311052 RXFP4Q8TDU9 374 aa12.78□□□□□ -0.36
CARHSP1-201ENST00000311052 OTORQ9NRC9 128 aa12.78□□□□□ -0.36
CARHSP1-201ENST00000311052 TRBV7-9A0A0J9YWB2 115 aa12.77□□□□□ -0.37
CARHSP1-201ENST00000311052 ZNF324O75467 553 aaPredicted RBP12.77□□□□□ -0.37
CARHSP1-201ENST00000311052 GPX1P07203 203 aa12.77□□□□□ -0.37
CARHSP1-201ENST00000311052 RNASE4P34096 147 aaKnown RBP12.77□□□□□ -0.37
CARHSP1-201ENST00000311052 CDC34P49427 236 aaPredicted RBP12.77□□□□□ -0.37
CARHSP1-201ENST00000311052 ZNF138P52744 262 aa12.77□□□□□ -0.37
CARHSP1-201ENST00000311052 CD300CQ08708 224 aa12.77□□□□□ -0.37
CARHSP1-201ENST00000311052 FAM74A1Q5RGS3 127 aa12.77□□□□□ -0.37
CARHSP1-201ENST00000311052 RPL7L1Q6DKI1 246 aaKnown RBP12.77□□□□□ -0.37
CARHSP1-201ENST00000311052 GNPNAT1Q96EK6 184 aaPredicted RBP12.77□□□□□ -0.37
CARHSP1-201ENST00000311052 NOP10Q9NPE3 64 aaKnown RBP12.77□□□□□ -0.37
CARHSP1-201ENST00000311052 PGPA6NDG6 321 aa12.76□□□□□ -0.37
CARHSP1-201ENST00000311052 CBY3A6NI87 242 aa12.76□□□□□ -0.37
CARHSP1-201ENST00000311052 DIRC3C9JPN6 131 aa12.76□□□□□ -0.37
CARHSP1-201ENST00000311052 HMGB3O15347 200 aaKnown RBP12.76□□□□□ -0.37
CARHSP1-201ENST00000311052 STAG3L2P0CL84 134 aa12.76□□□□□ -0.37
CARHSP1-201ENST00000311052 STAG3L3P0CL85 134 aa12.76□□□□□ -0.37
CARHSP1-201ENST00000311052 BTN1A1Q13410 526 aa12.76□□□□□ -0.37
CARHSP1-201ENST00000311052 ZFAND2AQ8N6M9 145 aa12.76□□□□□ -0.37
CARHSP1-201ENST00000311052 ARL6IP6Q8N6S5 226 aa12.76□□□□□ -0.37
CARHSP1-201ENST00000311052 LINC00467Q9BRT7 94 aa12.76□□□□□ -0.37
CARHSP1-201ENST00000311052 SH3BGRL3Q9H299 93 aa12.76□□□□□ -0.37
CARHSP1-201ENST00000311052 ARL14EPLP0DKL9 152 aa12.75□□□□□ -0.37
CARHSP1-201ENST00000311052 P0DMU3 169 aa12.75□□□□□ -0.37
CARHSP1-201ENST00000311052 FAM231AP0DMU4 169 aa12.75□□□□□ -0.37
CARHSP1-201ENST00000311052 FAM231CP0DMU5 169 aa12.75□□□□□ -0.37
CARHSP1-201ENST00000311052 CMTM2Q8TAZ6 248 aa12.75□□□□□ -0.37
CARHSP1-201ENST00000311052 RAB24Q969Q5 203 aa12.75□□□□□ -0.37
CARHSP1-201ENST00000311052 HYLS1Q96M11 299 aa12.75□□□□□ -0.37
CARHSP1-201ENST00000311052 SNURFLB1AK76 121 aa12.74□□□□□ -0.37
CARHSP1-201ENST00000311052 TAAR5O14804 337 aa12.74□□□□□ -0.37
CARHSP1-201ENST00000311052 ATP5G1P05496 136 aa12.74□□□□□ -0.37
CARHSP1-201ENST00000311052 ATP5G3P48201 142 aa12.74□□□□□ -0.37
CARHSP1-201ENST00000311052 Q8TAT8 98 aa12.74□□□□□ -0.37
CARHSP1-201ENST00000311052 ACTR3CQ9C0K3 210 aaPredicted RBP12.74□□□□□ -0.37
CARHSP1-201ENST00000311052 LENEPQ9Y5L5 61 aa12.74□□□□□ -0.37
CARHSP1-201ENST00000311052 ARPC5O15511 151 aa12.73□□□□□ -0.37
CARHSP1-201ENST00000311052 ANXA2RQ3ZCQ2 193 aa12.73□□□□□ -0.37
CARHSP1-201ENST00000311052 PRR9Q5T870 116 aa12.73□□□□□ -0.37
CARHSP1-201ENST00000311052 TMEM88Q6PEY1 159 aa12.73□□□□□ -0.37
CARHSP1-201ENST00000311052 EIF4E3Q8N5X7 224 aaKnown RBP12.73□□□□□ -0.37
CARHSP1-201ENST00000311052 LINC00612Q8N6U2 182 aa12.73□□□□□ -0.37
CARHSP1-201ENST00000311052 ZNF680Q8NEM1 530 aa12.73□□□□□ -0.37
CARHSP1-201ENST00000311052 SUN5Q8TC36 379 aa12.73□□□□□ -0.37
CARHSP1-201ENST00000311052 TMED6Q8WW62 240 aa12.73□□□□□ -0.37
CARHSP1-201ENST00000311052 F5H768 121 aa12.72□□□□□ -0.37
CARHSP1-201ENST00000311052 CXorf1O96002 111 aa12.72□□□□□ -0.37
CARHSP1-201ENST00000311052 GCHFRP30047 84 aa12.72□□□□□ -0.37
CARHSP1-201ENST00000311052 DAZ2Q13117 558 aaKnown RBP12.72□□□□□ -0.37
CARHSP1-201ENST00000311052 SMLR1H3BR10 107 aa12.71□□□□□ -0.37
CARHSP1-201ENST00000311052 RGS13O14921 159 aa12.71□□□□□ -0.37
CARHSP1-201ENST00000311052 POM121L12Q8N7R1 296 aa12.71□□□□□ -0.37
CARHSP1-201ENST00000311052 C15orf53Q8NAA6 179 aa12.71□□□□□ -0.37
CARHSP1-201ENST00000311052 ST6GAL2Q96JF0 529 aa12.71□□□□□ -0.37
CARHSP1-201ENST00000311052 RPH3ALQ9UNE2 315 aa12.71□□□□□ -0.37
CARHSP1-201ENST00000311052 IGHV1OR15-1A0A075B7D0 117 aa12.7□□□□□ -0.38
CARHSP1-201ENST00000311052 GAGE12BA1L429 117 aa12.7□□□□□ -0.38
CARHSP1-201ENST00000311052 GAGE7O76087 117 aa12.7□□□□□ -0.38
CARHSP1-201ENST00000311052 GAGE12FP0CL80 117 aa12.7□□□□□ -0.38
CARHSP1-201ENST00000311052 GAGE12GP0CL81 117 aa12.7□□□□□ -0.38
CARHSP1-201ENST00000311052 GAGE12IP0CL82 117 aa12.7□□□□□ -0.38
CARHSP1-201ENST00000311052 GOLT1AQ6ZVE7 132 aa12.7□□□□□ -0.38
CARHSP1-201ENST00000311052 C11orf72Q8NBR9 251 aa12.7□□□□□ -0.38
CARHSP1-201ENST00000311052 GSN-AS1Q9NRJ2 163 aa12.7□□□□□ -0.38
CARHSP1-201ENST00000311052 CYTL1Q9NRR1 136 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 341.6 ms