RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 IGFL3Q6UXB1 125 aa14.16□□□□□ -0.14
RETREG1-201ENST00000306320 SPAG8Q99932 426 aaPredicted RBP14.16□□□□□ -0.14
RETREG1-201ENST00000306320 IL4P05112 153 aa14.15□□□□□ -0.14
RETREG1-201ENST00000306320 C20orf78Q9BR46 151 aa14.15□□□□□ -0.14
RETREG1-201ENST00000306320 ZFHX3Q15911 3703 aa14.15□□□□□ -0.14
RETREG1-201ENST00000306320 TRAV40A0A0B4J280 105 aa14.15□□□□□ -0.14
RETREG1-201ENST00000306320 J3KRW8 73 aa14.15□□□□□ -0.14
RETREG1-201ENST00000306320 FBXL15Q9H469 300 aa14.15□□□□□ -0.14
RETREG1-201ENST00000306320 NDUFB3O43676 98 aa14.14□□□□□ -0.15
RETREG1-201ENST00000306320 MYCNOSP40205 109 aa14.14□□□□□ -0.15
RETREG1-201ENST00000306320 UFC1Q9Y3C8 167 aa14.14□□□□□ -0.15
RETREG1-201ENST00000306320 E7EQL1 145 aa14.14□□□□□ -0.15
RETREG1-201ENST00000306320 H3BVH4 76 aa14.14□□□□□ -0.15
RETREG1-201ENST00000306320 APOBEC3AP31941 199 aaPredicted RBP14.14□□□□□ -0.15
RETREG1-201ENST00000306320 CRYBA4P53673 196 aa14.14□□□□□ -0.15
RETREG1-201ENST00000306320 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.14□□□□□ -0.15
RETREG1-201ENST00000306320 KLF12Q9Y4X4 402 aa14.14□□□□□ -0.15
RETREG1-201ENST00000306320 IGHV3OR16-13A0A075B7E8 117 aa14.13□□□□□ -0.15
RETREG1-201ENST00000306320 IGHV3-74A0A0B4J1X5 117 aa14.13□□□□□ -0.15
RETREG1-201ENST00000306320 CRIP1P50238 77 aa14.13□□□□□ -0.15
RETREG1-201ENST00000306320 ANXA2RQ3ZCQ2 193 aa14.13□□□□□ -0.15
RETREG1-201ENST00000306320 TRBV25-1A0A075B6N4 114 aa14.13□□□□□ -0.15
RETREG1-201ENST00000306320 C8orf46Q8TAG6 207 aa14.13□□□□□ -0.15
RETREG1-201ENST00000306320 ZNF492Q9P255 531 aa14.13□□□□□ -0.15
RETREG1-201ENST00000306320 CDSNQ15517 529 aa14.12□□□□□ -0.15
RETREG1-201ENST00000306320 LGALS9BQ3B8N2 356 aa14.12□□□□□ -0.15
RETREG1-201ENST00000306320 LGALS9CQ6DKI2 356 aa14.12□□□□□ -0.15
RETREG1-201ENST00000306320 GEMIN7Q9H840 131 aaKnown RBP14.12□□□□□ -0.15
RETREG1-201ENST00000306320 CT83Q5H943 113 aa14.12□□□□□ -0.15
RETREG1-201ENST00000306320 GFRA4Q9GZZ7 299 aa14.12□□□□□ -0.15
RETREG1-201ENST00000306320 OTORQ9NRC9 128 aa14.12□□□□□ -0.15
RETREG1-201ENST00000306320 CYSLTR1Q9Y271 337 aa14.12□□□□□ -0.15
RETREG1-201ENST00000306320 NDUFS8O00217 210 aa14.12□□□□□ -0.15
RETREG1-201ENST00000306320 GAGE13Q4V321 117 aa14.12□□□□□ -0.15
RETREG1-201ENST00000306320 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.11□□□□□ -0.15
RETREG1-201ENST00000306320 TMEM8BA6NDV4 472 aa14.11□□□□□ -0.15
RETREG1-201ENST00000306320 TMEM178BH3BS89 294 aa14.11□□□□□ -0.15
RETREG1-201ENST00000306320 FSTL3O95633 263 aa14.11□□□□□ -0.15
RETREG1-201ENST00000306320 GLMPQ8WWB7 406 aa14.11□□□□□ -0.15
RETREG1-201ENST00000306320 HRNRQ86YZ3 2850 aaPredicted RBP14.11□□□□□ -0.15
RETREG1-201ENST00000306320 HIVEP3Q5T1R4 2406 aa14.11□□□□□ -0.15
RETREG1-201ENST00000306320 SPRY2O43597 315 aa14.11□□□□□ -0.15
RETREG1-201ENST00000306320 APOMO95445 188 aa14.11□□□□□ -0.15
RETREG1-201ENST00000306320 POU2AF1Q16633 256 aa14.11□□□□□ -0.15
RETREG1-201ENST00000306320 FAM104BQ5XKR9 115 aa14.11□□□□□ -0.15
RETREG1-201ENST00000306320 RNASE6Q93091 150 aaKnown RBP14.11□□□□□ -0.15
RETREG1-201ENST00000306320 VPS13CQ709C8 3753 aa14.11□□□□□ -0.15
RETREG1-201ENST00000306320 PTH2Q96A98 100 aa14.1□□□□□ -0.15
RETREG1-201ENST00000306320 TRAV26-2A0A0B4J265 109 aa14.1□□□□□ -0.15
RETREG1-201ENST00000306320 SH2D1AO60880 128 aa14.1□□□□□ -0.15
RETREG1-201ENST00000306320 HLA-DMBP28068 263 aa14.1□□□□□ -0.15
RETREG1-201ENST00000306320 SYT8Q8NBV8 401 aa14.1□□□□□ -0.15
RETREG1-201ENST00000306320 TMEM158Q8WZ71 300 aa14.1□□□□□ -0.15
RETREG1-201ENST00000306320 C3orf36Q3SXR2 165 aa14.1□□□□□ -0.15
RETREG1-201ENST00000306320 AAMDCQ9H7C9 122 aa14.1□□□□□ -0.15
RETREG1-201ENST00000306320 NGBQ9NPG2 151 aa14.1□□□□□ -0.15
RETREG1-201ENST00000306320 IGLV2-11P01706 119 aa14.09□□□□□ -0.15
RETREG1-201ENST00000306320 IGKCP01834 107 aa14.09□□□□□ -0.15
RETREG1-201ENST00000306320 GATA4P43694 442 aa14.09□□□□□ -0.15
RETREG1-201ENST00000306320 TMEM167AQ8TBQ9 72 aa14.09□□□□□ -0.15
RETREG1-201ENST00000306320 MAP1LC3AQ9H492 121 aa14.09□□□□□ -0.15
RETREG1-201ENST00000306320 IGHV3-66A0A0C4DH42 116 aa14.09□□□□□ -0.15
RETREG1-201ENST00000306320 SPANXB1Q9NS25 103 aaPredicted RBP14.09□□□□□ -0.15
RETREG1-201ENST00000306320 LINC00312Q9Y6C7 94 aa14.09□□□□□ -0.15
RETREG1-201ENST00000306320 PSMB2P49721 201 aa14.08□□□□□ -0.16
RETREG1-201ENST00000306320 CR1LQ2VPA4 569 aa14.08□□□□□ -0.16
RETREG1-201ENST00000306320 MAPKAPK5-AS1Q8N8E1 139 aa14.08□□□□□ -0.16
RETREG1-201ENST00000306320 MRPL35Q9NZE8 188 aaKnown RBP14.08□□□□□ -0.16
RETREG1-201ENST00000306320 CENPEQ02224 2701 aa14.08□□□□□ -0.16
RETREG1-201ENST00000306320 ZNF785A8K8V0 405 aa14.07□□□□□ -0.16
RETREG1-201ENST00000306320 IGLL5B9A064 214 aa14.07□□□□□ -0.16
RETREG1-201ENST00000306320 SPINK8P0C7L1 97 aa14.07□□□□□ -0.16
RETREG1-201ENST00000306320 SMIM17P0DL12 118 aa14.07□□□□□ -0.16
RETREG1-201ENST00000306320 EFNA4P52798 201 aa14.07□□□□□ -0.16
RETREG1-201ENST00000306320 RAXQ9Y2V3 346 aa14.07□□□□□ -0.16
RETREG1-201ENST00000306320 ONECUT1Q9UBC0 465 aa14.07□□□□□ -0.16
RETREG1-201ENST00000306320 LOXP28300 417 aaPredicted RBP14.07□□□□□ -0.16
RETREG1-201ENST00000306320 HES1Q14469 280 aa14.07□□□□□ -0.16
RETREG1-201ENST00000306320 THAP8Q8NA92 274 aa14.07□□□□□ -0.16
RETREG1-201ENST00000306320 MRPL16Q9NX20 251 aaKnown RBP14.07□□□□□ -0.16
RETREG1-201ENST00000306320 SS18L2Q9UHA2 77 aa14.07□□□□□ -0.16
RETREG1-201ENST00000306320 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.07□□□□□ -0.16
RETREG1-201ENST00000306320 IGHV3-49A0A0A0MS15 119 aa14.06□□□□□ -0.16
RETREG1-201ENST00000306320 SHISA9B4DS77 424 aa14.06□□□□□ -0.16
RETREG1-201ENST00000306320 CCL21O00585 134 aa14.06□□□□□ -0.16
RETREG1-201ENST00000306320 CEND1Q8N111 149 aa14.06□□□□□ -0.16
RETREG1-201ENST00000306320 SCGB1D4Q6XE38 83 aa14.05□□□□□ -0.16
RETREG1-201ENST00000306320 TTC9CQ8N5M4 171 aa14.05□□□□□ -0.16
RETREG1-201ENST00000306320 ARL3P36405 182 aa14.05□□□□□ -0.16
RETREG1-201ENST00000306320 TRGV9Q99603 122 aa14.05□□□□□ -0.16
RETREG1-201ENST00000306320 HIF1ANQ9NWT6 349 aa14.05□□□□□ -0.16
RETREG1-201ENST00000306320 H7C2G1 150 aa14.05□□□□□ -0.16
RETREG1-201ENST00000306320 EGR2P11161 476 aaPredicted RBP14.05□□□□□ -0.16
RETREG1-201ENST00000306320 EMP1P54849 157 aa14.05□□□□□ -0.16
RETREG1-201ENST00000306320 C12orf74Q32Q52 190 aa14.05□□□□□ -0.16
RETREG1-201ENST00000306320 ZNF833PQ6ZTB9 187 aa14.05□□□□□ -0.16
RETREG1-201ENST00000306320 TRBV19A0A075B6N1 114 aa14.04□□□□□ -0.16
RETREG1-201ENST00000306320 ATP5IP56385 69 aaPredicted RBP14.04□□□□□ -0.16
RETREG1-201ENST00000306320 ZFYVE26Q68DK2 2539 aa14.04□□□□□ -0.16
RETREG1-201ENST00000306320 KLRD1Q13241 179 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms