RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 HTN3P15516 51 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 BVES-AS1Q5T3Y7 98 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 HS3ST6Q96QI5 342 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 F8VRH5 84 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 B3GALT5-AS1P59052 145 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 C1orf159Q96HA4 380 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 RBAKDNA6NC62 111 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 C10orf55Q5SWW7 151 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 CRIPAKQ8N1N5 446 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 METRNQ9UJH8 293 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 A0A1W2PPI3 338 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 A0A1W2PRX2 142 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 MAJINQ3KP22 176 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 THAP8Q8NA92 274 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 PLCE1Q9P212 2302 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 CFHR2P36980 270 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 MRPL51Q4U2R6 128 aaKnown RBP6.17□□□□□ -1.42
SF3B3-201ENST00000302516 C2orf66Q6UXQ4 117 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 SPXQ9BT56 116 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 COLQQ9Y215 455 aaPredicted RBP6.17□□□□□ -1.42
SF3B3-201ENST00000302516 RHOHQ15669 191 aa6.17□□□□□ -1.42
SF3B3-201ENST00000302516 KIR2DL5BA0A0G2JN68 375 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 KIR2DL5BA0A0G2JPC4 375 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 SHISA9B4DS77 424 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 LTAP01374 205 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 FHL1Q13642 323 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 KIR2DL5AQ8N109 375 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 STPG4Q8N801 248 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 TRBV25-1A0A075B6N4 114 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 H3BRN7 92 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 HERVK_113P63121 156 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 LINC00311Q8N616 119 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 C8orf31Q8N9H6 132 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 PRSS47A8MTI9 375 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 SMKR1H3BMG3 65 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 SAP30O75446 220 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 FCN3O75636 299 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 TMEM258P61165 79 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 DSCR8Q96T75 97 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 TCF15Q12870 199 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 PKIGQ9Y2B9 76 aa6.16□□□□□ -1.42
SF3B3-201ENST00000302516 MRPL53Q96EL3 112 aaKnown RBP6.16□□□□□ -1.42
SF3B3-201ENST00000302516 TSSC4Q9Y5U2 329 aaPredicted RBP6.16□□□□□ -1.42
SF3B3-201ENST00000302516 IGHG3P01860 377 aa6.15□□□□□ -1.42
SF3B3-201ENST00000302516 RNF114Q9Y508 228 aa6.15□□□□□ -1.42
SF3B3-201ENST00000302516 IGHV3-73A0A0B4J1V6 119 aa6.15□□□□□ -1.42
SF3B3-201ENST00000302516 IGKV1-16P04430 117 aa6.15□□□□□ -1.42
SF3B3-201ENST00000302516 ZNF134P52741 427 aa6.15□□□□□ -1.42
SF3B3-201ENST00000302516 TFF1P04155 84 aa6.15□□□□□ -1.42
SF3B3-201ENST00000302516 C8orf49Q96NF6 230 aa6.15□□□□□ -1.42
SF3B3-201ENST00000302516 SMIM2Q9BVW6 85 aa6.15□□□□□ -1.42
SF3B3-201ENST00000302516 RHPN1-AS1Q9BWJ2 59 aa6.15□□□□□ -1.42
SF3B3-201ENST00000302516 SIGLEC8Q9NYZ4 499 aa6.15□□□□□ -1.42
SF3B3-201ENST00000302516 MYO18BQ8IUG5 2567 aa6.15□□□□□ -1.42
SF3B3-201ENST00000302516 Q6ZRM9 215 aa6.15□□□□□ -1.42
SF3B3-201ENST00000302516 CD24P25063 80 aa6.15□□□□□ -1.43
SF3B3-201ENST00000302516 ZNF493Q6ZR52 646 aa6.15□□□□□ -1.43
SF3B3-201ENST00000302516 A0A087WWL8 130 aa6.15□□□□□ -1.43
SF3B3-201ENST00000302516 A0A0G2JRQ6 117 aa6.15□□□□□ -1.43
SF3B3-201ENST00000302516 A0A0U1RRA0 63 aa6.15□□□□□ -1.43
SF3B3-201ENST00000302516 KLHDC3Q9BQ90 382 aa6.15□□□□□ -1.43
SF3B3-201ENST00000302516 INS-IGF2F8WCM5 200 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 PCNX3Q9H6A9 2034 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 ZNF114Q8NC26 417 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 VWC2Q2TAL6 325 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 NDUFA4O00483 81 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 FGF6P10767 208 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 POU2AF1Q16633 256 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 LINC01356Q8N9X3 169 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 IGKV1-6A0A0C4DH72 117 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 C9JQL5 133 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 CD33P20138 364 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 UBE2E1P51965 193 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 TNRC6BQ9UPQ9 1833 aaKnown RBP6.14□□□□□ -1.43
SF3B3-201ENST00000302516 MALRD1Q5VYJ5 2156 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 FXYD7P58549 80 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 PIP4P2Q8N4L2 257 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 CYYR1Q96J86 154 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 LTBRP36941 435 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 NDPQ00604 133 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 COA6Q5JTJ3 125 aaKnown RBP6.14□□□□□ -1.43
SF3B3-201ENST00000302516 LENEPQ9Y5L5 61 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 TRAV13-1A0A0B4J241 112 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 NPSP0C0P6 89 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 TMEM219Q86XT9 240 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 RNF152Q8N8N0 203 aa6.14□□□□□ -1.43
SF3B3-201ENST00000302516 AZU1P20160 251 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 TEX36Q5VZQ5 186 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 CARD19Q96LW7 228 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 PRR25Q96S07 402 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 H3BUA1 57 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 UBE2DNLQ8IWF7 75 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 ANKRD29Q8N6D5 301 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 KLF2Q9Y5W3 355 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-201ENST00000302516 C8orf86Q6ZUL3 223 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 TMEM213A2RRL7 107 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 SDHAF1A6NFY7 115 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 K7EM74 188 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 IGLL1P15814 213 aa6.13□□□□□ -1.43
SF3B3-201ENST00000302516 Q6ZVH6 145 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms