RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 CNN1P51911 297 aaKnown RBP11.2□□□□□ -0.62
UBXN1-202ENST00000301935 FAM74A3Q4VXF1 159 aa11.2□□□□□ -0.62
UBXN1-202ENST00000301935 IGFL4Q6B9Z1 124 aa11.2□□□□□ -0.62
UBXN1-202ENST00000301935 FOXI2Q6ZQN5 318 aa11.2□□□□□ -0.62
UBXN1-202ENST00000301935 FMC1Q96HJ9 113 aa11.2□□□□□ -0.62
UBXN1-202ENST00000301935 C20orf173Q96LM9 149 aa11.2□□□□□ -0.62
UBXN1-202ENST00000301935 LINC00477Q96M19 166 aa11.2□□□□□ -0.62
UBXN1-202ENST00000301935 MAP6D1Q9H9H5 199 aa11.2□□□□□ -0.62
UBXN1-202ENST00000301935 KLF12Q9Y4X4 402 aa11.2□□□□□ -0.62
UBXN1-202ENST00000301935 TRBV6-1A0A0K0K1D8 114 aa11.19□□□□□ -0.62
UBXN1-202ENST00000301935 A8MZ25 164 aa11.19□□□□□ -0.62
UBXN1-202ENST00000301935 SRP19P09132 144 aaKnown RBP11.19□□□□□ -0.62
UBXN1-202ENST00000301935 HLA-DMBP28068 263 aa11.19□□□□□ -0.62
UBXN1-202ENST00000301935 TAS2R60P59551 318 aa11.19□□□□□ -0.62
UBXN1-202ENST00000301935 DEFB131AP59861 70 aa11.19□□□□□ -0.62
UBXN1-202ENST00000301935 GOLT1AQ6ZVE7 132 aa11.19□□□□□ -0.62
UBXN1-202ENST00000301935 Q8N1Y9 231 aa11.19□□□□□ -0.62
UBXN1-202ENST00000301935 FAM24BQ8N5W8 94 aa11.19□□□□□ -0.62
UBXN1-202ENST00000301935 TMEM75Q8N9X5 138 aa11.19□□□□□ -0.62
UBXN1-202ENST00000301935 OR8A1Q8NGG7 326 aa11.19□□□□□ -0.62
UBXN1-202ENST00000301935 C2CD4CQ8TF44 421 aa11.19□□□□□ -0.62
UBXN1-202ENST00000301935 C19orf73Q9NVV2 129 aa11.19□□□□□ -0.62
UBXN1-202ENST00000301935 PPP1R14DQ9NXH3 145 aa11.19□□□□□ -0.62
UBXN1-202ENST00000301935 SCO2A0A1W2PP80 73 aa11.18□□□□□ -0.62
UBXN1-202ENST00000301935 ZNF705FA8MVS1 300 aaPredicted RBP11.18□□□□□ -0.62
UBXN1-202ENST00000301935 AKR1C3P42330 323 aa11.18□□□□□ -0.62
UBXN1-202ENST00000301935 UBE2G1P62253 170 aa11.18□□□□□ -0.62
UBXN1-202ENST00000301935 ODF3L2Q3SX64 289 aa11.18□□□□□ -0.62
UBXN1-202ENST00000301935 TMEM78Q5T7P6 136 aa11.18□□□□□ -0.62
UBXN1-202ENST00000301935 C9orf47Q6ZRZ4 202 aa11.18□□□□□ -0.62
UBXN1-202ENST00000301935 CLUHP3Q96NS8 147 aa11.18□□□□□ -0.62
UBXN1-202ENST00000301935 SAV1Q9H4B6 383 aaPredicted RBP11.18□□□□□ -0.62
UBXN1-202ENST00000301935 RPH3ALQ9UNE2 315 aa11.18□□□□□ -0.62
UBXN1-202ENST00000301935 LENEPQ9Y5L5 61 aa11.18□□□□□ -0.62
UBXN1-202ENST00000301935 TRBV7-9A0A0J9YWB2 115 aa11.17□□□□□ -0.62
UBXN1-202ENST00000301935 A0A0J9YX75 114 aa11.17□□□□□ -0.62
UBXN1-202ENST00000301935 GNG5P63218 68 aa11.17□□□□□ -0.62
UBXN1-202ENST00000301935 SRSF3P84103 164 aaKnown RBP11.17□□□□□ -0.62
UBXN1-202ENST00000301935 TMEM183BQ1AE95 376 aa11.17□□□□□ -0.62
UBXN1-202ENST00000301935 SOHLH1Q5JUK2 328 aa11.17□□□□□ -0.62
UBXN1-202ENST00000301935 ZFP30Q9Y2G7 519 aa11.17□□□□□ -0.62
UBXN1-202ENST00000301935 PLECQ15149 4684 aaKnown RBP11.16□□□□□ -0.62
UBXN1-202ENST00000301935 NPIPB6E9PJ23 425 aa11.16□□□□□ -0.62
UBXN1-202ENST00000301935 HLA-DRB4P13762 266 aa11.16□□□□□ -0.62
UBXN1-202ENST00000301935 SAPCD1Q5SSQ6 148 aa11.16□□□□□ -0.62
UBXN1-202ENST00000301935 SMIM12Q96EX1 92 aa11.16□□□□□ -0.62
UBXN1-202ENST00000301935 SPATA25Q9BR10 227 aa11.16□□□□□ -0.62
UBXN1-202ENST00000301935 NDFIP1Q9BT67 221 aa11.16□□□□□ -0.62
UBXN1-202ENST00000301935 HLA-DRB4X5D2U9 266 aa11.16□□□□□ -0.62
UBXN1-202ENST00000301935 TMEM218A2RU14 115 aa11.15□□□□□ -0.62
UBXN1-202ENST00000301935 PRAC2D3DTV9 90 aa11.15□□□□□ -0.62
UBXN1-202ENST00000301935 CD7P09564 240 aa11.15□□□□□ -0.62
UBXN1-202ENST00000301935 RPL35P42766 123 aaKnown RBP11.15□□□□□ -0.62
UBXN1-202ENST00000301935 ZNF138P52744 262 aa11.15□□□□□ -0.62
UBXN1-202ENST00000301935 FLI1Q01543 452 aaPredicted RBP11.15□□□□□ -0.62
UBXN1-202ENST00000301935 ODF3Q96PU9 254 aa11.15□□□□□ -0.62
UBXN1-202ENST00000301935 IGKV2-40A0A087WW87 121 aaPredicted RBP11.14□□□□□ -0.63
UBXN1-202ENST00000301935 A8MTW9 85 aa11.14□□□□□ -0.63
UBXN1-202ENST00000301935 C9JCJ5 164 aa11.14□□□□□ -0.63
UBXN1-202ENST00000301935 C9JQL5 133 aa11.14□□□□□ -0.63
UBXN1-202ENST00000301935 H3BMM0 161 aa11.14□□□□□ -0.63
UBXN1-202ENST00000301935 IGKV2D-40P01614 121 aaPredicted RBP11.14□□□□□ -0.63
UBXN1-202ENST00000301935 SFTA3P0C7M3 94 aa11.14□□□□□ -0.63
UBXN1-202ENST00000301935 TSPOP30536 169 aa11.14□□□□□ -0.63
UBXN1-202ENST00000301935 HIST1H1AQ02539 215 aaPredicted RBP11.14□□□□□ -0.63
UBXN1-202ENST00000301935 STHQ8IWL8 128 aa11.14□□□□□ -0.63
UBXN1-202ENST00000301935 SMIM7Q9BQ49 75 aa11.14□□□□□ -0.63
UBXN1-202ENST00000301935 AGPAT4-IT1Q9H0P7 198 aa11.14□□□□□ -0.63
UBXN1-202ENST00000301935 PARLQ9H300 379 aa11.14□□□□□ -0.63
UBXN1-202ENST00000301935 BIN3Q9NQY0 253 aa11.14□□□□□ -0.63
UBXN1-202ENST00000301935 PSG8Q9UQ74 426 aa11.14□□□□□ -0.63
UBXN1-202ENST00000301935 LY96Q9Y6Y9 160 aa11.14□□□□□ -0.63
UBXN1-202ENST00000301935 ZNF727A8MUV8 499 aa11.13□□□□□ -0.63
UBXN1-202ENST00000301935 KRBOX1C9JBD0 128 aa11.13□□□□□ -0.63
UBXN1-202ENST00000301935 IGLV2-11P01706 119 aa11.13□□□□□ -0.63
UBXN1-202ENST00000301935 GNG4P50150 75 aa11.13□□□□□ -0.63
UBXN1-202ENST00000301935 CEBPGP53567 150 aa11.13□□□□□ -0.63
UBXN1-202ENST00000301935 NUTF2P61970 127 aaKnown RBP11.13□□□□□ -0.63
UBXN1-202ENST00000301935 ACTL10Q5JWF8 245 aa11.13□□□□□ -0.63
UBXN1-202ENST00000301935 VGLL1Q99990 258 aa11.13□□□□□ -0.63
UBXN1-202ENST00000301935 ZNF492Q9P255 531 aa11.13□□□□□ -0.63
UBXN1-202ENST00000301935 LTAP01374 205 aa11.12□□□□□ -0.63
UBXN1-202ENST00000301935 AMBPP02760 352 aa11.12□□□□□ -0.63
UBXN1-202ENST00000301935 LEPP41159 167 aa11.12□□□□□ -0.63
UBXN1-202ENST00000301935 TMEM241Q24JQ0 296 aa11.12□□□□□ -0.63
UBXN1-202ENST00000301935 ZNF674Q2M3X9 581 aa11.12□□□□□ -0.63
UBXN1-202ENST00000301935 PRNTQ86SH4 94 aa11.12□□□□□ -0.63
UBXN1-202ENST00000301935 BAGE2Q86Y30 109 aa11.12□□□□□ -0.63
UBXN1-202ENST00000301935 APRG1Q8IVJ8 170 aa11.12□□□□□ -0.63
UBXN1-202ENST00000301935 SLC7A5P1Q8MH63 180 aa11.12□□□□□ -0.63
UBXN1-202ENST00000301935 LINC00479Q96M42 142 aa11.12□□□□□ -0.63
UBXN1-202ENST00000301935 NIPSNAP3BQ9BS92 247 aa11.12□□□□□ -0.63
UBXN1-202ENST00000301935 SEC11CQ9BY50 192 aa11.12□□□□□ -0.63
UBXN1-202ENST00000301935 TRAV34A0A0B4J273 112 aa11.11□□□□□ -0.63
UBXN1-202ENST00000301935 KNCNA6PVL3 124 aa11.11□□□□□ -0.63
UBXN1-202ENST00000301935 F6UB75 175 aa11.11□□□□□ -0.63
UBXN1-202ENST00000301935 ERCC8Q13216 396 aa11.11□□□□□ -0.63
UBXN1-202ENST00000301935 COX8CQ7Z4L0 72 aa11.11□□□□□ -0.63
UBXN1-202ENST00000301935 Q86TA4 180 aa11.11□□□□□ -0.63
UBXN1-202ENST00000301935 OR4B1Q8NGF8 309 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms