RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 MLST8Q9BVC4 326 aa17.06■□□□□ 0.32
TPM4-201ENST00000300933 OTORQ9NRC9 128 aa17.06■□□□□ 0.32
TPM4-201ENST00000300933 C7orf71A4D174 169 aa17.06■□□□□ 0.32
TPM4-201ENST00000300933 HIST1H1AQ02539 215 aaPredicted RBP17.06■□□□□ 0.32
TPM4-201ENST00000300933 PIMREGQ9BSJ6 248 aa17.06■□□□□ 0.32
TPM4-201ENST00000300933 MEGF9Q9H1U4 602 aa17.06■□□□□ 0.32
TPM4-201ENST00000300933 THYN1Q9P016 225 aa17.06■□□□□ 0.32
TPM4-201ENST00000300933 TMEM14CQ9P0S9 112 aa17.06■□□□□ 0.32
TPM4-201ENST00000300933 IGHV3-66A0A0C4DH42 116 aa17.05■□□□□ 0.32
TPM4-201ENST00000300933 K7ERU9 68 aa17.05■□□□□ 0.32
TPM4-201ENST00000300933 LTAP01374 205 aa17.05■□□□□ 0.32
TPM4-201ENST00000300933 IGLV2-11P01706 119 aa17.05■□□□□ 0.32
TPM4-201ENST00000300933 CLEC3BP05452 202 aa17.05■□□□□ 0.32
TPM4-201ENST00000300933 LY6EQ16553 131 aa17.05■□□□□ 0.32
TPM4-201ENST00000300933 NAA38Q9BRA0 125 aaKnown RBP17.05■□□□□ 0.32
TPM4-201ENST00000300933 A1L4Q6 167 aa17.04■□□□□ 0.32
TPM4-201ENST00000300933 RPS20P60866 119 aaKnown RBP17.04■□□□□ 0.32
TPM4-201ENST00000300933 SIGLEC15Q6ZMC9 328 aa17.04■□□□□ 0.32
TPM4-201ENST00000300933 C10orf105Q8TEF2 133 aa17.04■□□□□ 0.32
TPM4-201ENST00000300933 ZNF414Q96IQ9 312 aa17.04■□□□□ 0.32
TPM4-201ENST00000300933 PEF1Q9UBV8 284 aaKnown RBP17.04■□□□□ 0.32
TPM4-201ENST00000300933 PET117Q6UWS5 81 aa17.04■□□□□ 0.32
TPM4-201ENST00000300933 RBPMS2Q6ZRY4 209 aaKnown RBP17.04■□□□□ 0.32
TPM4-201ENST00000300933 FMC1Q96HJ9 113 aa17.04■□□□□ 0.32
TPM4-201ENST00000300933 IGHV3-49A0A0A0MS15 119 aa17.04■□□□□ 0.32
TPM4-201ENST00000300933 MRPS12O15235 138 aaKnown RBP17.04■□□□□ 0.32
TPM4-201ENST00000300933 OR5AL1P0C617 328 aa17.04■□□□□ 0.32
TPM4-201ENST00000300933 PAX8Q06710 450 aa17.04■□□□□ 0.32
TPM4-201ENST00000300933 PRSS22Q9GZN4 317 aa17.04■□□□□ 0.32
TPM4-201ENST00000300933 CLEC2AQ6UVW9 174 aa17.03■□□□□ 0.32
TPM4-201ENST00000300933 Q86TA4 180 aa17.03■□□□□ 0.32
TPM4-201ENST00000300933 FAM231BA6NCW3 169 aa17.02■□□□□ 0.32
TPM4-201ENST00000300933 GAGE10A6NGK3 116 aa17.02■□□□□ 0.32
TPM4-201ENST00000300933 NCR2O95944 276 aa17.02■□□□□ 0.32
TPM4-201ENST00000300933 HLA-DMBP28068 263 aa17.02■□□□□ 0.32
TPM4-201ENST00000300933 CLEC19AQ6UXS0 136 aa17.02■□□□□ 0.32
TPM4-201ENST00000300933 C2orf91Q6ZV80 131 aa17.02■□□□□ 0.32
TPM4-201ENST00000300933 HSPB8Q9UJY1 196 aa17.02■□□□□ 0.32
TPM4-201ENST00000300933 ZNF207O43670 478 aaKnown RBP17.02■□□□□ 0.31
TPM4-201ENST00000300933 COL8A1P27658 744 aa17.02■□□□□ 0.31
TPM4-201ENST00000300933 MAPK1IP1LQ8NDC0 245 aa17.02■□□□□ 0.31
TPM4-201ENST00000300933 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.01■□□□□ 0.31
TPM4-201ENST00000300933 C19orf71A6NCJ1 209 aa17.01■□□□□ 0.31
TPM4-201ENST00000300933 ZNF785A8K8V0 405 aa17.01■□□□□ 0.31
TPM4-201ENST00000300933 PIFOQ8TCI5 191 aa17.01■□□□□ 0.31
TPM4-201ENST00000300933 NDFIP1Q9BT67 221 aa17.01■□□□□ 0.31
TPM4-201ENST00000300933 DOPEY2Q9Y3R5 2298 aa17.01■□□□□ 0.31
TPM4-201ENST00000300933 IGHV1-69DA0A0B4J2H0 117 aa17.01■□□□□ 0.31
TPM4-201ENST00000300933 IGHV1-69P01742 117 aa17.01■□□□□ 0.31
TPM4-201ENST00000300933 C5orf56Q8N8D9 126 aa17.01■□□□□ 0.31
TPM4-201ENST00000300933 MS4A6AQ9H2W1 248 aa17.01■□□□□ 0.31
TPM4-201ENST00000300933 TMEM8BA6NDV4 472 aa17■□□□□ 0.31
TPM4-201ENST00000300933 APOHP02749 345 aaPredicted RBP17■□□□□ 0.31
TPM4-201ENST00000300933 COX8AP10176 69 aa17■□□□□ 0.31
TPM4-201ENST00000300933 FAM110DQ8TAY7 271 aaPredicted RBP16.99■□□□□ 0.31
TPM4-201ENST00000300933 LINC01545Q5VT33 79 aa16.99■□□□□ 0.31
TPM4-201ENST00000300933 AVPP01185 164 aa16.98■□□□□ 0.31
TPM4-201ENST00000300933 TMEM97Q5BJF2 176 aa16.98■□□□□ 0.31
TPM4-201ENST00000300933 C8orf49Q96NF6 230 aa16.98■□□□□ 0.31
TPM4-201ENST00000300933 IGKV2-40A0A087WW87 121 aaPredicted RBP16.98■□□□□ 0.31
TPM4-201ENST00000300933 IGKV2D-40P01614 121 aaPredicted RBP16.98■□□□□ 0.31
TPM4-201ENST00000300933 CCDC140Q96MF4 163 aa16.98■□□□□ 0.31
TPM4-201ENST00000300933 TPPP3Q9BW30 176 aa16.98■□□□□ 0.31
TPM4-201ENST00000300933 AP5S1Q9NUS5 200 aa16.98■□□□□ 0.31
TPM4-201ENST00000300933 SMAD5-AS1Q9Y6J3 95 aa16.98■□□□□ 0.31
TPM4-201ENST00000300933 ZNF502Q8TBZ5 544 aa16.97■□□□□ 0.31
TPM4-201ENST00000300933 AP1S3Q96PC3 154 aa16.97■□□□□ 0.31
TPM4-201ENST00000300933 PSG8Q9UQ74 426 aa16.97■□□□□ 0.31
TPM4-201ENST00000300933 NAV2Q8IVL1 2488 aa16.97■□□□□ 0.31
TPM4-201ENST00000300933 FAM106AQ4KMX7 169 aa16.96■□□□□ 0.31
TPM4-201ENST00000300933 CT83Q5H943 113 aa16.96■□□□□ 0.31
TPM4-201ENST00000300933 OR8A1Q8NGG7 326 aa16.96■□□□□ 0.31
TPM4-201ENST00000300933 RABAC1Q9UI14 185 aa16.96■□□□□ 0.31
TPM4-201ENST00000300933 TLN2Q9Y4G6 2542 aa16.96■□□□□ 0.31
TPM4-201ENST00000300933 H3BUT2 72 aa16.96■□□□□ 0.31
TPM4-201ENST00000300933 Q6ZS46 218 aa16.96■□□□□ 0.31
TPM4-201ENST00000300933 FER1L6-AS1Q8NA97 138 aa16.96■□□□□ 0.31
TPM4-201ENST00000300933 ZNF48Q96MX3 618 aaPredicted RBP16.96■□□□□ 0.31
TPM4-201ENST00000300933 ZNF747Q9BV97 191 aa16.96■□□□□ 0.31
TPM4-201ENST00000300933 ARMS2P0C7Q2 107 aa16.95■□□□□ 0.3
TPM4-201ENST00000300933 PRSS3P2Q8NHM4 247 aa16.95■□□□□ 0.3
TPM4-201ENST00000300933 RAB37Q96AX2 223 aa16.95■□□□□ 0.3
TPM4-201ENST00000300933 SMIM12Q96EX1 92 aa16.95■□□□□ 0.3
TPM4-201ENST00000300933 JMJD8Q96S16 334 aa16.95■□□□□ 0.3
TPM4-201ENST00000300933 HIF1ANQ9NWT6 349 aa16.95■□□□□ 0.3
TPM4-201ENST00000300933 UBR5O95071 2799 aaPredicted RBP16.95■□□□□ 0.3
TPM4-201ENST00000300933 NBPF19A0A087WUL8 3843 aa16.95■□□□□ 0.3
TPM4-201ENST00000300933 MXRA5Q9NR99 2828 aa16.95■□□□□ 0.3
TPM4-201ENST00000300933 TMEM238C9JI98 176 aa16.95■□□□□ 0.3
TPM4-201ENST00000300933 H3BUX3 64 aa16.95■□□□□ 0.3
TPM4-201ENST00000300933 CRIP1P50238 77 aa16.95■□□□□ 0.3
TPM4-201ENST00000300933 FXYD7P58549 80 aa16.95■□□□□ 0.3
TPM4-201ENST00000300933 ZNF492Q9P255 531 aa16.95■□□□□ 0.3
TPM4-201ENST00000300933 LOC389332A0A1B0GUA5 103 aa16.94■□□□□ 0.3
TPM4-201ENST00000300933 PSG3Q16557 428 aa16.94■□□□□ 0.3
TPM4-201ENST00000300933 LCNL1Q6ZST4 164 aa16.94■□□□□ 0.3
TPM4-201ENST00000300933 Q8TAT8 98 aa16.94■□□□□ 0.3
TPM4-201ENST00000300933 GFRA4Q9GZZ7 299 aa16.94■□□□□ 0.3
TPM4-201ENST00000300933 AAMDCQ9H7C9 122 aa16.94■□□□□ 0.3
TPM4-201ENST00000300933 TMSB15BA0A087X1C1 80 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms