RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 OVOL1O14753 267 aa9.57□□□□□ -0.88
SHROOM3-201ENST00000296043 CECR9P0C854 216 aa9.57□□□□□ -0.88
SHROOM3-201ENST00000296043 Q6ZUT4 128 aa9.57□□□□□ -0.88
SHROOM3-201ENST00000296043 TRGV1A0A0A0MS02 117 aa9.57□□□□□ -0.88
SHROOM3-201ENST00000296043 CRYGBP07316 175 aa9.57□□□□□ -0.88
SHROOM3-201ENST00000296043 TMEM141Q96I45 108 aa9.57□□□□□ -0.88
SHROOM3-201ENST00000296043 ZNF581Q9P0T4 197 aa9.57□□□□□ -0.88
SHROOM3-201ENST00000296043 ZNF493Q6ZR52 646 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 DPM3Q9P2X0 92 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 IGKV1-27A0A075B6S5 117 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 J3QQQ9 107 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 NDUFS5O43920 106 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 EFEMP2O95967 443 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 TFF2Q03403 129 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 ZNF492Q9P255 531 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 FOXI1Q12951 378 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 DEFB124Q8NES8 71 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 PSMB8P28062 276 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 C15orf32Q32M92 178 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 C2orf66Q6UXQ4 117 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 SLC22A18ASQ8N1D0 253 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 LINC00312Q9Y6C7 94 aa9.56□□□□□ -0.88
SHROOM3-201ENST00000296043 STHQ8IWL8 128 aa9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 SPAARA0A1B0GVQ0 90 aa9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 AHRRA9YTQ3 701 aa9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 F6UB75 175 aa9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 FAM166AQ6J272 317 aa9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 LINC00173Q6ZV60 143 aa9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 TRPT1Q86TN4 253 aaKnown RBP9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 NUP210LQ5VU65 1888 aa9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 A0A0B4J2C4 111 aa9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 EFNA4P52798 201 aa9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 TRAV13-2A0A0B4J235 113 aa9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 IGKV1-12A0A0C4DH73 117 aa9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 IGKV1D-12P01611 117 aa9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 YPEL3P61236 119 aaPredicted RBP9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 RNASE13Q5GAN3 156 aaKnown RBP9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 STPG1Q5TH74 334 aa9.55□□□□□ -0.88
SHROOM3-201ENST00000296043 PRSS46E5RG02 174 aa9.54□□□□□ -0.88
SHROOM3-201ENST00000296043 NUPR1O60356 82 aa9.54□□□□□ -0.88
SHROOM3-201ENST00000296043 CFC1BP0CG36 223 aa9.54□□□□□ -0.88
SHROOM3-201ENST00000296043 CFC1P0CG37 223 aa9.54□□□□□ -0.88
SHROOM3-201ENST00000296043 ZNF726P1Q15940 193 aa9.54□□□□□ -0.88
SHROOM3-201ENST00000296043 CTHRC1Q96CG8 243 aa9.54□□□□□ -0.88
SHROOM3-201ENST00000296043 ZNF106Q9H2Y7 1883 aaKnown RBP9.54□□□□□ -0.88
SHROOM3-201ENST00000296043 F8VRH5 84 aa9.54□□□□□ -0.88
SHROOM3-201ENST00000296043 FXYD2P54710 66 aa9.54□□□□□ -0.88
SHROOM3-201ENST00000296043 LINC00114Q6XXX2 140 aa9.54□□□□□ -0.88
SHROOM3-201ENST00000296043 RNF144BQ7Z419 303 aa9.54□□□□□ -0.88
SHROOM3-201ENST00000296043 C21orf140B9A014 251 aa9.53□□□□□ -0.88
SHROOM3-201ENST00000296043 LYPD6Q86Y78 171 aa9.53□□□□□ -0.88
SHROOM3-201ENST00000296043 SRSF7Q16629 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
SHROOM3-201ENST00000296043 MYO9AB2RTY4 2548 aa9.53□□□□□ -0.88
SHROOM3-201ENST00000296043 SPACA3Q8IXA5 215 aa9.53□□□□□ -0.88
SHROOM3-201ENST00000296043 PAX8Q06710 450 aa9.52□□□□□ -0.88
SHROOM3-201ENST00000296043 PSG7Q13046 419 aa9.52□□□□□ -0.88
SHROOM3-201ENST00000296043 TMEM75Q8N9X5 138 aa9.52□□□□□ -0.88
SHROOM3-201ENST00000296043 CXCL10P02778 98 aa9.52□□□□□ -0.88
SHROOM3-201ENST00000296043 Q6ZRM9 215 aa9.52□□□□□ -0.88
SHROOM3-201ENST00000296043 ICOSQ9Y6W8 199 aa9.52□□□□□ -0.88
SHROOM3-201ENST00000296043 MUSTN1Q8IVN3 82 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 WBP1Q96G27 269 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 ORMDL1Q9P0S3 153 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 ACYP1P07311 99 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 RFPL3SP0C7P2 107 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 COX6A1P12074 109 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 LINC00205P59089 165 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 PTH2Q96A98 100 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 K7EN84 100 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 LINC00473A8K010 186 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 FAM90A1Q86YD7 464 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 TRBV19A0A075B6N1 114 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 A0A087WX48 190 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 A0A0G2JRQ6 117 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 DUSP14O95147 198 aaKnown RBP9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 NXPH4O95158 308 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 PF4P02776 101 aa9.52□□□□□ -0.89
SHROOM3-201ENST00000296043 DKK1O94907 266 aa9.51□□□□□ -0.89
SHROOM3-201ENST00000296043 TM4SF4P48230 202 aa9.51□□□□□ -0.89
SHROOM3-201ENST00000296043 TMEM190Q8WZ59 177 aa9.51□□□□□ -0.89
SHROOM3-201ENST00000296043 LINC00477Q96M19 166 aa9.51□□□□□ -0.89
SHROOM3-201ENST00000296043 WFDC11Q8NEX6 87 aa9.51□□□□□ -0.89
SHROOM3-201ENST00000296043 J3QW42 95 aa9.51□□□□□ -0.89
SHROOM3-201ENST00000296043 CEP192Q8TEP8 1941 aa9.51□□□□□ -0.89
SHROOM3-201ENST00000296043 CHKB-CPT1BH3BT56 60 aa9.51□□□□□ -0.89
SHROOM3-201ENST00000296043 CRYGCP07315 174 aa9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 BSPH1Q075Z2 132 aa9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 RNF152Q8N8N0 203 aa9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 IGHV3-16A0A0C4DH30 117 aa9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 TRIP6Q15654 476 aaKnown RBP9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 HIVEP3Q5T1R4 2406 aa9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 COLCA1Q6ZS62 124 aa9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 ATP5J2P56134 94 aa9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 SMIM10L1P0DMW3 83 aa9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 C5orf64Q2M2E5 130 aa9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 SMIM10Q96HG1 83 aa9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 HERVK_113P63121 156 aa9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 QRFPP83859 136 aa9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 RPL36AP83881 106 aaKnown RBP9.5□□□□□ -0.89
SHROOM3-201ENST00000296043 RPL36ALQ969Q0 106 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms