RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SPRNQ5BIV9 151 aa14.06□□□□□ -0.16
CDC42EP3-201ENST00000295324 LGALS1P09382 135 aaKnown RBP14.06□□□□□ -0.16
CDC42EP3-201ENST00000295324 CDKN1BP46527 198 aa14.06□□□□□ -0.16
CDC42EP3-201ENST00000295324 MORN3Q6PF18 240 aaPredicted RBP14.06□□□□□ -0.16
CDC42EP3-201ENST00000295324 TEX43Q6ZNM6 134 aa14.06□□□□□ -0.16
CDC42EP3-201ENST00000295324 ORAOV1Q8WV07 137 aa14.06□□□□□ -0.16
CDC42EP3-201ENST00000295324 MS4A6AQ9H2W1 248 aa14.06□□□□□ -0.16
CDC42EP3-201ENST00000295324 C1orf159Q96HA4 380 aa14.06□□□□□ -0.16
CDC42EP3-201ENST00000295324 SMPXQ9UHP9 88 aa14.06□□□□□ -0.16
CDC42EP3-201ENST00000295324 A0A087WWL8 130 aa14.05□□□□□ -0.16
CDC42EP3-201ENST00000295324 IGLC1P0CG04 106 aa14.05□□□□□ -0.16
CDC42EP3-201ENST00000295324 ADAMTS9Q9P2N4 1935 aa14.05□□□□□ -0.16
CDC42EP3-201ENST00000295324 H3BRN7 92 aa14.05□□□□□ -0.16
CDC42EP3-201ENST00000295324 PFN1P07737 140 aaKnown RBP14.05□□□□□ -0.16
CDC42EP3-201ENST00000295324 FOXE3Q13461 319 aa14.05□□□□□ -0.16
CDC42EP3-201ENST00000295324 NUP35Q8NFH5 326 aa14.05□□□□□ -0.16
CDC42EP3-201ENST00000295324 PLNP26678 52 aa14.05□□□□□ -0.16
CDC42EP3-201ENST00000295324 IGHV1OR15-1A0A075B7D0 117 aa14.04□□□□□ -0.16
CDC42EP3-201ENST00000295324 LSM4Q9Y4Z0 139 aaKnown RBP14.04□□□□□ -0.16
CDC42EP3-201ENST00000295324 TRAV2A0A0B4J234 112 aa14.04□□□□□ -0.16
CDC42EP3-201ENST00000295324 PAX9P55771 341 aa14.04□□□□□ -0.16
CDC42EP3-201ENST00000295324 CSTL1Q9H114 145 aa14.04□□□□□ -0.16
CDC42EP3-201ENST00000295324 TMEM14CQ9P0S9 112 aa14.04□□□□□ -0.16
CDC42EP3-201ENST00000295324 LINC00158P58513 81 aa14.04□□□□□ -0.16
CDC42EP3-201ENST00000295324 A8MWV9 139 aa14.03□□□□□ -0.16
CDC42EP3-201ENST00000295324 HOXD3P31249 432 aaPredicted RBP14.03□□□□□ -0.16
CDC42EP3-201ENST00000295324 PHLDA1Q8WV24 401 aaPredicted RBP14.03□□□□□ -0.16
CDC42EP3-201ENST00000295324 ATRXP46100 2492 aa14.03□□□□□ -0.16
CDC42EP3-201ENST00000295324 IGKCP01834 107 aa14.03□□□□□ -0.16
CDC42EP3-201ENST00000295324 ZNF124Q15973 351 aa14.03□□□□□ -0.16
CDC42EP3-201ENST00000295324 SONP18583 2426 aaKnown RBP14.02□□□□□ -0.16
CDC42EP3-201ENST00000295324 Q6ZSR3 168 aa14.02□□□□□ -0.16
CDC42EP3-201ENST00000295324 TRPT1Q86TN4 253 aaKnown RBP14.02□□□□□ -0.16
CDC42EP3-201ENST00000295324 LINC00479Q96M42 142 aa14.02□□□□□ -0.16
CDC42EP3-201ENST00000295324 ATP6V0BQ99437 205 aa14.02□□□□□ -0.16
CDC42EP3-201ENST00000295324 THAP8Q8NA92 274 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 SLC25A2Q9BXI2 301 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 GFRA4Q9GZZ7 299 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 HIST1H2BKO60814 126 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 HIST1H2BJP06899 126 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 HIST1H2BOP23527 126 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 HIST1H2BBP33778 126 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 HIST1H2BDP58876 126 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 HIST1H2BCP62807 126 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 SS18Q15532 418 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 HIST2H2BEQ16778 126 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 HIST1H2BHQ93079 126 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 ZNF479Q96JC4 524 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 HIST1H2BNQ99877 126 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 HIST1H2BMQ99879 126 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 KNCNA6PVL3 124 aa14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 FGF23Q9GZV9 251 aaPredicted RBP14.02□□□□□ -0.17
CDC42EP3-201ENST00000295324 CFHR3Q02985 330 aa14.01□□□□□ -0.17
CDC42EP3-201ENST00000295324 C9orf66Q5T8R8 295 aa14.01□□□□□ -0.17
CDC42EP3-201ENST00000295324 KLK9Q9UKQ9 250 aa14.01□□□□□ -0.17
CDC42EP3-201ENST00000295324 CD300EQ496F6 205 aaPredicted RBP14.01□□□□□ -0.17
CDC42EP3-201ENST00000295324 RASL10AQ92737 203 aa14.01□□□□□ -0.17
CDC42EP3-201ENST00000295324 ZNF492Q9P255 531 aa14.01□□□□□ -0.17
CDC42EP3-201ENST00000295324 PLCE1Q9P212 2302 aa14.01□□□□□ -0.17
CDC42EP3-201ENST00000295324 UBE2CO00762 179 aa14.01□□□□□ -0.17
CDC42EP3-201ENST00000295324 AZU1P20160 251 aa14.01□□□□□ -0.17
CDC42EP3-201ENST00000295324 A0A0U1RRA0 63 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 IGLC7A0M8Q6 106 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 WISP2O76076 250 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 C6orf226Q5I0X4 101 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 GAGE12BA1L429 117 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 GGTLC3B5MD39 225 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 GAGE7O76087 117 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 GAGE12FP0CL80 117 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 GAGE12GP0CL81 117 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 GAGE12IP0CL82 117 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 HSD52Q0P140 79 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 NPBQ8NG41 125 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 GAGE13Q4V321 117 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 S100A7L2Q5SY68 101 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 SAMD5Q5TGI4 173 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 DEFB104AQ8WTQ1 72 aa14□□□□□ -0.17
CDC42EP3-201ENST00000295324 ATXN8Q156A1 80 aa13.99□□□□□ -0.17
CDC42EP3-201ENST00000295324 IGHV3-64A0A075B6Q5 118 aa13.99□□□□□ -0.17
CDC42EP3-201ENST00000295324 GAGE12JA6NER3 117 aa13.99□□□□□ -0.17
CDC42EP3-201ENST00000295324 GAGE1Q13065 139 aa13.99□□□□□ -0.17
CDC42EP3-201ENST00000295324 GAGE4Q13068 117 aa13.99□□□□□ -0.17
CDC42EP3-201ENST00000295324 GAGE5Q13069 117 aa13.99□□□□□ -0.17
CDC42EP3-201ENST00000295324 BLCAPP62952 87 aa13.98□□□□□ -0.17
CDC42EP3-201ENST00000295324 ZNF491Q8N8L2 437 aa13.98□□□□□ -0.17
CDC42EP3-201ENST00000295324 MRAPQ8TCY5 172 aa13.98□□□□□ -0.17
CDC42EP3-201ENST00000295324 FAM231BA6NCW3 169 aa13.98□□□□□ -0.17
CDC42EP3-201ENST00000295324 SSBP2P81877 361 aaPredicted RBP13.98□□□□□ -0.17
CDC42EP3-201ENST00000295324 PLEKHB2Q96CS7 222 aa13.98□□□□□ -0.17
CDC42EP3-201ENST00000295324 IGHV7-81A0A0B4J1V7 117 aa13.98□□□□□ -0.17
CDC42EP3-201ENST00000295324 AMN1Q8IY45 258 aa13.98□□□□□ -0.17
CDC42EP3-201ENST00000295324 PRR25Q96S07 402 aa13.98□□□□□ -0.17
CDC42EP3-201ENST00000295324 PLXNB3Q9ULL4 1909 aa13.98□□□□□ -0.17
CDC42EP3-201ENST00000295324 TRAV13-1A0A0B4J241 112 aa13.97□□□□□ -0.17
CDC42EP3-201ENST00000295324 LRRC75A-AS1Q8N1F1 130 aa13.97□□□□□ -0.17
CDC42EP3-201ENST00000295324 HIST1H2BLQ99880 126 aa13.97□□□□□ -0.17
CDC42EP3-201ENST00000295324 JPT2Q9H910 190 aa13.97□□□□□ -0.17
CDC42EP3-201ENST00000295324 FOXI2Q6ZQN5 318 aa13.97□□□□□ -0.17
CDC42EP3-201ENST00000295324 TRAV12-2A0A075B6T6 113 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms