RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 RANP62826 216 aaKnown RBP11.33□□□□□ -0.6
CCDC140-201ENST00000295226 RPL19P84098 196 aaKnown RBP11.33□□□□□ -0.6
CCDC140-201ENST00000295226 HIST2H2BEQ16778 126 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.33□□□□□ -0.6
CCDC140-201ENST00000295226 RNF182Q8N6D2 247 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 OCC1Q8TAD7 63 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 HIST1H2BHQ93079 126 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 HIST1H2BNQ99877 126 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 HIST1H2BMQ99879 126 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 ZNF256Q9Y2P7 627 aaPredicted RBP11.33□□□□□ -0.6
CCDC140-201ENST00000295226 A0A087X0K7 114 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 TRAV8-2A0A0B4J237 113 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 TRAV25A0A0B4J276 109 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 A0A1W2PPQ1 181 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 K7EQG2 157 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 SOCS3O14543 225 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 MEOX2P50222 304 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 PAFAH1B2P68402 229 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 LCN12Q6JVE5 192 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 EXOC3-AS1Q8N2X6 119 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 C16orf92Q96LL3 132 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 C20orf173Q96LM9 149 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 GGTLC3B5MD39 225 aa11.32□□□□□ -0.6
CCDC140-201ENST00000295226 ZNF688P0C7X2 276 aa11.32□□□□□ -0.6
CCDC140-201ENST00000295226 DEFB1P60022 68 aa11.32□□□□□ -0.6
CCDC140-201ENST00000295226 KRTAP10-11P60412 298 aa11.32□□□□□ -0.6
CCDC140-201ENST00000295226 SUMO1P63165 101 aaKnown RBP11.32□□□□□ -0.6
CCDC140-201ENST00000295226 PHOX2AO14813 284 aa11.31□□□□□ -0.6
CCDC140-201ENST00000295226 TRGC1P0CF51 173 aa11.31□□□□□ -0.6
CCDC140-201ENST00000295226 CNN1P51911 297 aaKnown RBP11.31□□□□□ -0.6
CCDC140-201ENST00000295226 NDUFA6P56556 154 aa11.31□□□□□ -0.6
CCDC140-201ENST00000295226 CENPWQ5EE01 88 aa11.31□□□□□ -0.6
CCDC140-201ENST00000295226 OR2K2Q8NGT1 345 aa11.31□□□□□ -0.6
CCDC140-201ENST00000295226 FRZBQ92765 325 aa11.31□□□□□ -0.6
CCDC140-201ENST00000295226 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
CCDC140-201ENST00000295226 ZNF331Q9NQX6 463 aaPredicted RBP11.31□□□□□ -0.6
CCDC140-201ENST00000295226 NOTCH1P46531 2555 aa11.31□□□□□ -0.6
CCDC140-201ENST00000295226 ZNF705FA8MVS1 300 aaPredicted RBP11.3□□□□□ -0.6
CCDC140-201ENST00000295226 WIPF1O43516 503 aa11.3□□□□□ -0.6
CCDC140-201ENST00000295226 CD7P09564 240 aa11.3□□□□□ -0.6
CCDC140-201ENST00000295226 SMIM12Q96EX1 92 aa11.3□□□□□ -0.6
CCDC140-201ENST00000295226 C12orf57Q99622 126 aa11.3□□□□□ -0.6
CCDC140-201ENST00000295226 Q9H3A6 140 aa11.3□□□□□ -0.6
CCDC140-201ENST00000295226 OSTCQ9NRP0 149 aa11.3□□□□□ -0.6
CCDC140-201ENST00000295226 IL36BQ9NZH7 164 aa11.3□□□□□ -0.6
CCDC140-201ENST00000295226 ZNF124Q15973 351 aa11.3□□□□□ -0.6
CCDC140-201ENST00000295226 BEAN1Q3B7T3 259 aa11.3□□□□□ -0.6
CCDC140-201ENST00000295226 SAMD5Q5TGI4 173 aa11.3□□□□□ -0.6
CCDC140-201ENST00000295226 PGPA6NDG6 321 aa11.29□□□□□ -0.6
CCDC140-201ENST00000295226 OR4C46A6NHA9 309 aa11.29□□□□□ -0.6
CCDC140-201ENST00000295226 M0R3E3 92 aa11.29□□□□□ -0.6
CCDC140-201ENST00000295226 ISLRO14498 428 aa11.29□□□□□ -0.6
CCDC140-201ENST00000295226 GCGP01275 180 aa11.29□□□□□ -0.6
CCDC140-201ENST00000295226 S100A2P29034 98 aa11.29□□□□□ -0.6
CCDC140-201ENST00000295226 COX19Q49B96 90 aa11.29□□□□□ -0.6
CCDC140-201ENST00000295226 PSMG4Q5JS54 123 aa11.29□□□□□ -0.6
CCDC140-201ENST00000295226 ACTL10Q5JWF8 245 aa11.29□□□□□ -0.6
CCDC140-201ENST00000295226 PRR25Q96S07 402 aa11.29□□□□□ -0.6
CCDC140-201ENST00000295226 WFDC10AQ9H1F0 79 aa11.29□□□□□ -0.6
CCDC140-201ENST00000295226 AGRNO00468 2067 aa11.28□□□□□ -0.6
CCDC140-201ENST00000295226 PGPEP1LA6NFU8 196 aa11.28□□□□□ -0.6
CCDC140-201ENST00000295226 DEFB131AP59861 70 aa11.28□□□□□ -0.6
CCDC140-201ENST00000295226 ERVFC1-1P60608 527 aa11.28□□□□□ -0.6
CCDC140-201ENST00000295226 APRG1Q8IVJ8 170 aa11.28□□□□□ -0.6
CCDC140-201ENST00000295226 IGF2BP2-AS1Q96M15 143 aa11.28□□□□□ -0.6
CCDC140-201ENST00000295226 GPR61Q9BZJ8 451 aa11.28□□□□□ -0.6
CCDC140-201ENST00000295226 AURKAIP1Q9NWT8 199 aaPredicted RBP11.28□□□□□ -0.6
CCDC140-201ENST00000295226 NBEAL1Q6ZS30 2694 aa11.28□□□□□ -0.6
CCDC140-201ENST00000295226 PRAC2D3DTV9 90 aa11.27□□□□□ -0.6
CCDC140-201ENST00000295226 K7EN84 100 aa11.27□□□□□ -0.6
CCDC140-201ENST00000295226 PEX7O00628 323 aa11.27□□□□□ -0.6
CCDC140-201ENST00000295226 ZNF705DP0CH99 300 aaPredicted RBP11.27□□□□□ -0.6
CCDC140-201ENST00000295226 ZNF705BP0CI00 300 aaPredicted RBP11.27□□□□□ -0.6
CCDC140-201ENST00000295226 ID1P41134 155 aa11.27□□□□□ -0.6
CCDC140-201ENST00000295226 S100A12P80511 92 aa11.27□□□□□ -0.6
CCDC140-201ENST00000295226 PDE6HQ13956 83 aa11.27□□□□□ -0.6
CCDC140-201ENST00000295226 ODF3L2Q3SX64 289 aa11.27□□□□□ -0.6
CCDC140-201ENST00000295226 COA6Q5JTJ3 125 aaKnown RBP11.27□□□□□ -0.6
CCDC140-201ENST00000295226 SLC50A1Q9BRV3 221 aa11.27□□□□□ -0.6
CCDC140-201ENST00000295226 MAP6D1Q9H9H5 199 aa11.27□□□□□ -0.6
CCDC140-201ENST00000295226 DNAH3Q8TD57 4116 aa11.27□□□□□ -0.61
CCDC140-201ENST00000295226 TRAV2A0A0B4J234 112 aa11.27□□□□□ -0.61
CCDC140-201ENST00000295226 F6UB75 175 aa11.27□□□□□ -0.61
CCDC140-201ENST00000295226 PRB2P02812 416 aaPredicted RBP11.27□□□□□ -0.61
CCDC140-201ENST00000295226 GNG5P63218 68 aa11.27□□□□□ -0.61
CCDC140-201ENST00000295226 PSG9Q00887 426 aa11.27□□□□□ -0.61
CCDC140-201ENST00000295226 EGFEM1PQ0D2K5 195 aa11.27□□□□□ -0.61
CCDC140-201ENST00000295226 PSG3Q16557 428 aa11.27□□□□□ -0.61
CCDC140-201ENST00000295226 C5orf17Q8NAS9 161 aa11.27□□□□□ -0.61
CCDC140-201ENST00000295226 ZNF738Q8NE65 137 aa11.27□□□□□ -0.61
CCDC140-201ENST00000295226 RPH3ALQ9UNE2 315 aa11.27□□□□□ -0.61
CCDC140-201ENST00000295226 ZNF253O75346 499 aa11.26□□□□□ -0.61
CCDC140-201ENST00000295226 SNRPD3P62318 126 aaKnown RBP11.26□□□□□ -0.61
CCDC140-201ENST00000295226 TMEM183BQ1AE95 376 aa11.26□□□□□ -0.61
CCDC140-201ENST00000295226 FAM231DQ6ZW35 169 aa11.26□□□□□ -0.61
CCDC140-201ENST00000295226 AAMDCQ9H7C9 122 aa11.26□□□□□ -0.61
CCDC140-201ENST00000295226 OTORQ9NRC9 128 aa11.26□□□□□ -0.61
CCDC140-201ENST00000295226 KNCNA6PVL3 124 aa11.25□□□□□ -0.61
CCDC140-201ENST00000295226 SLC25A5P05141 298 aaKnown RBP11.25□□□□□ -0.61
CCDC140-201ENST00000295226 GDF5OSQ5U4N7 250 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms