RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 PPP1R14DQ9NXH3 145 aa6.12□□□□□ -1.43
TPM3-201ENST00000271850 A0A1W2PPQ1 181 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 KLLNB2CW77 178 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 H3BNG1 76 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 GOSR2O14653 212 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 PLA2G10O15496 165 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 COX7A2P2O60397 106 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 RLN2P04090 185 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 BTN1A1Q13410 526 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 VWC2Q2TAL6 325 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 NRARPQ7Z6K4 114 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 C18orf15Q96N68 181 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 GGACTQ9BVM4 153 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 GSKIPQ9P0R6 139 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 MGAT4CQ9UBM8 478 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 TP53TG3Q9ULZ0 132 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 KLF12Q9Y4X4 402 aa6.11□□□□□ -1.43
TPM3-201ENST00000271850 TRBV19A0A075B6N1 114 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 IGSF23A1L1A6 192 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 NAP1L6A6NFF2 107 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 FAM24AA6NFZ4 105 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 SPINK4O60575 86 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 NOL3O60936 208 aaKnown RBP6.1□□□□□ -1.43
TPM3-201ENST00000271850 CST7O76096 145 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 PYYP10082 97 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 CAMLGP49069 296 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 IL15RAQ13261 267 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 TTC32Q5I0X7 151 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 GCSAMLQ5JQS6 135 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 C10orf113Q5VZT2 155 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 ZFAND2AQ8N6M9 145 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 PYGO2Q9BRQ0 406 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 AGPAT4-IT1Q9H0P7 198 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 WDR83OSQ9Y284 106 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 PXMP4Q9Y6I8 212 aa6.1□□□□□ -1.43
TPM3-201ENST00000271850 DMBT1Q9UGM3 2413 aaPredicted RBP6.1□□□□□ -1.43
TPM3-201ENST00000271850 C7orf71A4D174 169 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 SNURFLB1AK76 121 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 ZNF253O75346 499 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 DNAH10OSP0CZ25 163 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 IL7P13232 177 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 S100A5P33763 92 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 LEPP41159 167 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 KRTAP10-1P60331 282 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 CCDC28AQ8IWP9 274 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 EXOC3-AS1Q8N2X6 119 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 SEC22CQ9BRL7 303 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 LINC00467Q9BRT7 94 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 C20orf85Q9H1P6 137 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 DNAJC4Q9NNZ3 241 aa6.09□□□□□ -1.43
TPM3-201ENST00000271850 LSM5Q9Y4Y9 91 aaKnown RBP6.09□□□□□ -1.43
TPM3-201ENST00000271850 FLG2Q5D862 2391 aaPredicted RBP6.09□□□□□ -1.43
TPM3-201ENST00000271850 IGKV2-40A0A087WW87 121 aaPredicted RBP6.08□□□□□ -1.44
TPM3-201ENST00000271850 TRGV1A0A0A0MS02 117 aa6.08□□□□□ -1.44
TPM3-201ENST00000271850 IGKV2D-40P01614 121 aaPredicted RBP6.08□□□□□ -1.44
TPM3-201ENST00000271850 IGHV3-53P01767 116 aa6.08□□□□□ -1.44
TPM3-201ENST00000271850 SLC25A5P05141 298 aaKnown RBP6.08□□□□□ -1.44
TPM3-201ENST00000271850 CRISP2P16562 243 aa6.08□□□□□ -1.44
TPM3-201ENST00000271850 RPL29P47914 159 aaKnown RBP6.08□□□□□ -1.44
TPM3-201ENST00000271850 TCL1AP56279 114 aa6.08□□□□□ -1.44
TPM3-201ENST00000271850 ANXA2RQ3ZCQ2 193 aa6.08□□□□□ -1.44
TPM3-201ENST00000271850 SPANXN2Q5MJ10 180 aa6.08□□□□□ -1.44
TPM3-201ENST00000271850 TRIQKQ629K1 86 aa6.08□□□□□ -1.44
TPM3-201ENST00000271850 MRPL53Q96EL3 112 aaKnown RBP6.08□□□□□ -1.44
TPM3-201ENST00000271850 FAM167A-AS1Q96KT0 104 aa6.08□□□□□ -1.44
TPM3-201ENST00000271850 VGLL1Q99990 258 aa6.08□□□□□ -1.44
TPM3-201ENST00000271850 SLC25A2Q9BXI2 301 aa6.08□□□□□ -1.44
TPM3-201ENST00000271850 SLC39A9Q9NUM3 307 aa6.08□□□□□ -1.44
TPM3-201ENST00000271850 FUT9Q9Y231 359 aa6.08□□□□□ -1.44
TPM3-201ENST00000271850 UBE2L5PA0A1B0GUS4 154 aa6.07□□□□□ -1.44
TPM3-201ENST00000271850 CCDC160A6NGH7 325 aa6.07□□□□□ -1.44
TPM3-201ENST00000271850 SIVA1O15304 175 aa6.07□□□□□ -1.44
TPM3-201ENST00000271850 NXPH4O95158 308 aa6.07□□□□□ -1.44
TPM3-201ENST00000271850 GUK1Q16774 197 aa6.07□□□□□ -1.44
TPM3-201ENST00000271850 S100A7AQ86SG5 101 aa6.07□□□□□ -1.44
TPM3-201ENST00000271850 LYPD1Q8N2G4 141 aa6.07□□□□□ -1.44
TPM3-201ENST00000271850 EIF4E3Q8N5X7 224 aaKnown RBP6.07□□□□□ -1.44
TPM3-201ENST00000271850 TMEM252Q8N6L7 170 aa6.07□□□□□ -1.44
TPM3-201ENST00000271850 CHAC2Q8WUX2 184 aa6.07□□□□□ -1.44
TPM3-201ENST00000271850 ST6GAL2Q96JF0 529 aa6.07□□□□□ -1.44
TPM3-201ENST00000271850 LYRM2Q9NU23 88 aaPredicted RBP6.07□□□□□ -1.44
TPM3-201ENST00000271850 UQCC1Q9NVA1 299 aa6.07□□□□□ -1.44
TPM3-201ENST00000271850 MRPL16Q9NX20 251 aaKnown RBP6.07□□□□□ -1.44
TPM3-201ENST00000271850 TMEM14CQ9P0S9 112 aa6.07□□□□□ -1.44
TPM3-201ENST00000271850 SRRM2Q9UQ35 2752 aaKnown RBP6.07□□□□□ -1.44
TPM3-201ENST00000271850 TRGV2A0A075B6R0 118 aa6.06□□□□□ -1.44
TPM3-201ENST00000271850 HIST1H1EP10412 219 aaKnown RBP6.06□□□□□ -1.44
TPM3-201ENST00000271850 RNASE4P34096 147 aaKnown RBP6.06□□□□□ -1.44
TPM3-201ENST00000271850 BCAP31P51572 246 aa6.06□□□□□ -1.44
TPM3-201ENST00000271850 CAV2P51636 162 aa6.06□□□□□ -1.44
TPM3-201ENST00000271850 CRYBA4P53673 196 aa6.06□□□□□ -1.44
TPM3-201ENST00000271850 RAB32Q13637 225 aa6.06□□□□□ -1.44
TPM3-201ENST00000271850 FHL2Q14192 279 aa6.06□□□□□ -1.44
TPM3-201ENST00000271850 IBA57Q5T440 356 aaKnown RBP6.06□□□□□ -1.44
TPM3-201ENST00000271850 LYPD5Q6UWN5 251 aa6.06□□□□□ -1.44
TPM3-201ENST00000271850 C9orf47Q6ZRZ4 202 aa6.06□□□□□ -1.44
TPM3-201ENST00000271850 ZNF680Q8NEM1 530 aa6.06□□□□□ -1.44
TPM3-201ENST00000271850 OR1L4Q8NGR5 311 aa6.06□□□□□ -1.44
TPM3-201ENST00000271850 Q8TAT8 98 aa6.06□□□□□ -1.44
TPM3-201ENST00000271850 RNF24Q9Y225 148 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms