RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 A0A087WX48 190 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 PRR20EP86478 221 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 PRR20CP86479 221 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 PRR20DP86480 221 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 PRR20BP86481 221 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 PRR20AP86496 221 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 FNDC4Q9H6D8 234 aaPredicted RBP12.24□□□□□ -0.45
TIMP3-201ENST00000266085 ZNF815PA8K554 130 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 CT83Q5H943 113 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 NRGNQ92686 78 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 NHP2Q9NX24 153 aaKnown RBP12.24□□□□□ -0.45
TIMP3-201ENST00000266085 TMEM131Q92545 1883 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 ADARB2-AS1A8MUL3 147 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 MALP21145 153 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 LINC00469Q8N7U9 141 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 TMEM14CQ9P0S9 112 aa12.24□□□□□ -0.45
TIMP3-201ENST00000266085 IGLC7A0M8Q6 106 aa12.23□□□□□ -0.45
TIMP3-201ENST00000266085 THAP8Q8NA92 274 aa12.23□□□□□ -0.45
TIMP3-201ENST00000266085 MS4A6AQ9H2W1 248 aa12.23□□□□□ -0.45
TIMP3-201ENST00000266085 C3orf79P0CE67 100 aa12.23□□□□□ -0.45
TIMP3-201ENST00000266085 C8orf86Q6ZUL3 223 aa12.23□□□□□ -0.45
TIMP3-201ENST00000266085 DTX2Q86UW9 622 aa12.23□□□□□ -0.45
TIMP3-201ENST00000266085 C5orf30Q96GV9 206 aa12.23□□□□□ -0.45
TIMP3-201ENST00000266085 USP9YO00507 2555 aaPredicted RBP12.23□□□□□ -0.45
TIMP3-201ENST00000266085 ZNF106Q9H2Y7 1883 aaKnown RBP12.23□□□□□ -0.45
TIMP3-201ENST00000266085 H3BRN7 92 aa12.23□□□□□ -0.45
TIMP3-201ENST00000266085 PLNP26678 52 aa12.23□□□□□ -0.45
TIMP3-201ENST00000266085 DEFB112Q30KQ8 113 aa12.23□□□□□ -0.45
TIMP3-201ENST00000266085 OR11H6Q8NGC7 330 aa12.23□□□□□ -0.45
TIMP3-201ENST00000266085 HOXB4P17483 251 aaPredicted RBP12.23□□□□□ -0.45
TIMP3-201ENST00000266085 LINC01619G3V211 115 aa12.22□□□□□ -0.45
TIMP3-201ENST00000266085 IGHV3-53P01767 116 aa12.22□□□□□ -0.45
TIMP3-201ENST00000266085 SPCS1Q9Y6A9 102 aa12.22□□□□□ -0.45
TIMP3-201ENST00000266085 SMKR1H3BMG3 65 aa12.22□□□□□ -0.45
TIMP3-201ENST00000266085 HOXA3O43365 443 aaPredicted RBP12.22□□□□□ -0.45
TIMP3-201ENST00000266085 IGHV4-59P01825 116 aa12.22□□□□□ -0.45
TIMP3-201ENST00000266085 DEFB104AQ8WTQ1 72 aa12.22□□□□□ -0.45
TIMP3-201ENST00000266085 CSTL1Q9H114 145 aa12.22□□□□□ -0.45
TIMP3-201ENST00000266085 A0A087WWL8 130 aa12.22□□□□□ -0.45
TIMP3-201ENST00000266085 TRBV7-9A0A0J9YWB2 115 aa12.22□□□□□ -0.45
TIMP3-201ENST00000266085 PRR25Q96S07 402 aa12.22□□□□□ -0.45
TIMP3-201ENST00000266085 RIPPLY3P57055 190 aa12.22□□□□□ -0.45
TIMP3-201ENST00000266085 FBXL19-AS1Q494R0 122 aa12.22□□□□□ -0.45
TIMP3-201ENST00000266085 PYY3Q5JQD4 70 aa12.22□□□□□ -0.45
TIMP3-201ENST00000266085 TCTEX1D4Q5JR98 221 aa12.21□□□□□ -0.45
TIMP3-201ENST00000266085 ZNF491Q8N8L2 437 aa12.21□□□□□ -0.45
TIMP3-201ENST00000266085 SPINK13Q1W4C9 94 aa12.21□□□□□ -0.45
TIMP3-201ENST00000266085 OR9G4Q8NGQ1 327 aa12.21□□□□□ -0.45
TIMP3-201ENST00000266085 KLF2Q9Y5W3 355 aaPredicted RBP12.21□□□□□ -0.45
TIMP3-201ENST00000266085 H3BUT2 72 aa12.21□□□□□ -0.46
TIMP3-201ENST00000266085 DEFB113Q30KQ7 82 aa12.21□□□□□ -0.46
TIMP3-201ENST00000266085 TMEM158Q8WZ71 300 aa12.21□□□□□ -0.46
TIMP3-201ENST00000266085 COL4A4P53420 1690 aaPredicted RBP12.21□□□□□ -0.46
TIMP3-201ENST00000266085 OR2K2Q8NGT1 345 aa12.2□□□□□ -0.46
TIMP3-201ENST00000266085 C11orf52Q96A22 123 aa12.2□□□□□ -0.46
TIMP3-201ENST00000266085 ELANEP08246 267 aa12.2□□□□□ -0.46
TIMP3-201ENST00000266085 FAM231DQ6ZW35 169 aa12.2□□□□□ -0.46
TIMP3-201ENST00000266085 LSM4Q9Y4Z0 139 aaKnown RBP12.2□□□□□ -0.46
TIMP3-201ENST00000266085 SETD2Q9BYW2 2564 aaPredicted RBP12.2□□□□□ -0.46
TIMP3-201ENST00000266085 A0A1B0GWB2 263 aa12.2□□□□□ -0.46
TIMP3-201ENST00000266085 CENPVL3A0A0U1RRI6 287 aa12.2□□□□□ -0.46
TIMP3-201ENST00000266085 TMEM213A2RRL7 107 aa12.2□□□□□ -0.46
TIMP3-201ENST00000266085 CRPP02741 224 aa12.2□□□□□ -0.46
TIMP3-201ENST00000266085 C8orf49Q96NF6 230 aa12.2□□□□□ -0.46
TIMP3-201ENST00000266085 SYS1-DBNDD2H3BUS1 97 aa12.19□□□□□ -0.46
TIMP3-201ENST00000266085 FXYD5Q96DB9 178 aa12.19□□□□□ -0.46
TIMP3-201ENST00000266085 XCL2Q9UBD3 114 aa12.19□□□□□ -0.46
TIMP3-201ENST00000266085 TYMSP04818 313 aa12.19□□□□□ -0.46
TIMP3-201ENST00000266085 DAZAP2Q15038 168 aaPredicted RBP12.19□□□□□ -0.46
TIMP3-201ENST00000266085 DEFB121Q5J5C9 76 aa12.19□□□□□ -0.46
TIMP3-201ENST00000266085 SPOCK3Q9BQ16 436 aa12.19□□□□□ -0.46
TIMP3-201ENST00000266085 IGHV3-64A0A075B6Q5 118 aa12.19□□□□□ -0.46
TIMP3-201ENST00000266085 TRAV2A0A0B4J234 112 aa12.19□□□□□ -0.46
TIMP3-201ENST00000266085 ORAOV1Q8WV07 137 aa12.19□□□□□ -0.46
TIMP3-201ENST00000266085 TNFRSF6BO95407 300 aa12.18□□□□□ -0.46
TIMP3-201ENST00000266085 Q0VG73 95 aa12.18□□□□□ -0.46
TIMP3-201ENST00000266085 TEX43Q6ZNM6 134 aa12.18□□□□□ -0.46
TIMP3-201ENST00000266085 A0A0U1RRA0 63 aa12.18□□□□□ -0.46
TIMP3-201ENST00000266085 C10orf142B7Z368 130 aa12.18□□□□□ -0.46
TIMP3-201ENST00000266085 IGHV4-38-2P0DP08 117 aa12.18□□□□□ -0.46
TIMP3-201ENST00000266085 C10orf105Q8TEF2 133 aa12.18□□□□□ -0.46
TIMP3-201ENST00000266085 SFTA2Q6UW10 78 aa12.18□□□□□ -0.46
TIMP3-201ENST00000266085 ZNF114Q8NC26 417 aa12.18□□□□□ -0.46
TIMP3-201ENST00000266085 SEC11AP67812 179 aa12.18□□□□□ -0.46
TIMP3-201ENST00000266085 OR5A1Q8NGJ0 315 aa12.18□□□□□ -0.46
TIMP3-201ENST00000266085 KIAA1549LQ6ZVL6 1849 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 PRSS46E5RG02 174 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 HSD52Q0P140 79 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 ZC2HC1BQ5TFG8 222 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 FAM104BQ5XKR9 115 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 C18orf32Q8TCD1 76 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 C1orf159Q96HA4 380 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 VPREB3Q9UKI3 123 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 V9GYV3 84 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 RBMY1BA6NDE4 496 aaKnown RBP12.17□□□□□ -0.46
TIMP3-201ENST00000266085 RBMY1EA6NEQ0 496 aaKnown RBP12.17□□□□□ -0.46
TIMP3-201ENST00000266085 A8MWP6 167 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 H3BUA1 57 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 RBMY1DP0C7P1 496 aaKnown RBP12.17□□□□□ -0.46
TIMP3-201ENST00000266085 RBMY1A1P0DJD3 496 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms