RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 HLA-DMBP28068 263 aa10.53□□□□□ -0.72
VMP1-201ENST00000262291 ZNF414Q96IQ9 312 aa10.53□□□□□ -0.72
VMP1-201ENST00000262291 OSTCQ9NRP0 149 aa10.53□□□□□ -0.72
VMP1-201ENST00000262291 TMEM14CQ9P0S9 112 aa10.53□□□□□ -0.72
VMP1-201ENST00000262291 A0A087X0K7 114 aa10.53□□□□□ -0.72
VMP1-201ENST00000262291 TRAV41A0A0B4J266 112 aa10.53□□□□□ -0.72
VMP1-201ENST00000262291 MRPS12O15235 138 aaKnown RBP10.53□□□□□ -0.72
VMP1-201ENST00000262291 SNAI2O43623 268 aa10.53□□□□□ -0.72
VMP1-201ENST00000262291 C18orf32Q8TCD1 76 aa10.53□□□□□ -0.72
VMP1-201ENST00000262291 OTORQ9NRC9 128 aa10.53□□□□□ -0.72
VMP1-201ENST00000262291 PRRC2AP48634 2157 aaKnown RBP10.53□□□□□ -0.72
VMP1-201ENST00000262291 H0Y8G0 127 aa10.52□□□□□ -0.72
VMP1-201ENST00000262291 IGHV3-11P01762 117 aa10.52□□□□□ -0.72
VMP1-201ENST00000262291 APCSP02743 223 aa10.52□□□□□ -0.73
VMP1-201ENST00000262291 APOHP02749 345 aaPredicted RBP10.52□□□□□ -0.73
VMP1-201ENST00000262291 FOXE3Q13461 319 aa10.52□□□□□ -0.73
VMP1-201ENST00000262291 SIGLEC15Q6ZMC9 328 aa10.52□□□□□ -0.73
VMP1-201ENST00000262291 DEFB125Q8N687 156 aa10.52□□□□□ -0.73
VMP1-201ENST00000262291 OR1N2Q8NGR9 330 aa10.52□□□□□ -0.73
VMP1-201ENST00000262291 OR4C46A6NHA9 309 aa10.51□□□□□ -0.73
VMP1-201ENST00000262291 TRBV12-3P01733 135 aa10.51□□□□□ -0.73
VMP1-201ENST00000262291 TRGV3P03979 118 aa10.51□□□□□ -0.73
VMP1-201ENST00000262291 GPR82Q96P67 336 aa10.51□□□□□ -0.73
VMP1-201ENST00000262291 MXRA5Q9NR99 2828 aa10.51□□□□□ -0.73
VMP1-201ENST00000262291 CREBBPQ92793 2442 aa10.51□□□□□ -0.73
VMP1-201ENST00000262291 TRAV9-1A0A075B6T8 112 aa10.51□□□□□ -0.73
VMP1-201ENST00000262291 TRBV9A0A0B4J1U6 114 aa10.51□□□□□ -0.73
VMP1-201ENST00000262291 DEFB112Q30KQ8 113 aa10.51□□□□□ -0.73
VMP1-201ENST00000262291 WDR73Q6P4I2 378 aa10.51□□□□□ -0.73
VMP1-201ENST00000262291 LINC00173Q6ZV60 143 aa10.51□□□□□ -0.73
VMP1-201ENST00000262291 TCF24Q7RTU0 167 aa10.51□□□□□ -0.73
VMP1-201ENST00000262291 SSBP4Q9BWG4 385 aaPredicted RBP10.51□□□□□ -0.73
VMP1-201ENST00000262291 RABAC1Q9UI14 185 aa10.51□□□□□ -0.73
VMP1-201ENST00000262291 IGLV2-11P01706 119 aa10.5□□□□□ -0.73
VMP1-201ENST00000262291 IGHV4-59P01825 116 aa10.5□□□□□ -0.73
VMP1-201ENST00000262291 FER1L6-AS1Q8NA97 138 aa10.5□□□□□ -0.73
VMP1-201ENST00000262291 ZNF48Q96MX3 618 aaPredicted RBP10.5□□□□□ -0.73
VMP1-201ENST00000262291 KLK15Q9H2R5 256 aa10.5□□□□□ -0.73
VMP1-201ENST00000262291 SMAD5-AS1Q9Y6J3 95 aa10.5□□□□□ -0.73
VMP1-201ENST00000262291 ZNF469Q96JG9 3925 aaPredicted RBP10.5□□□□□ -0.73
VMP1-201ENST00000262291 A0A096LNT2 108 aa10.5□□□□□ -0.73
VMP1-201ENST00000262291 MT-ND6P03923 174 aa10.5□□□□□ -0.73
VMP1-201ENST00000262291 Q86TA4 180 aa10.5□□□□□ -0.73
VMP1-201ENST00000262291 LINC01356Q8N9X3 169 aa10.5□□□□□ -0.73
VMP1-201ENST00000262291 KLF12Q9Y4X4 402 aa10.5□□□□□ -0.73
VMP1-201ENST00000262291 SONP18583 2426 aaKnown RBP10.5□□□□□ -0.73
VMP1-201ENST00000262291 IGKV2-40A0A087WW87 121 aaPredicted RBP10.49□□□□□ -0.73
VMP1-201ENST00000262291 A6NDX4 124 aa10.49□□□□□ -0.73
VMP1-201ENST00000262291 C2orf70A6NJV1 201 aa10.49□□□□□ -0.73
VMP1-201ENST00000262291 IGKV2D-40P01614 121 aaPredicted RBP10.49□□□□□ -0.73
VMP1-201ENST00000262291 SLC25A16P16260 332 aa10.49□□□□□ -0.73
VMP1-201ENST00000262291 ATP5G2Q06055 141 aa10.49□□□□□ -0.73
VMP1-201ENST00000262291 PMCHL2Q9BQD1 86 aa10.49□□□□□ -0.73
VMP1-201ENST00000262291 TIMM8BQ9Y5J9 83 aaPredicted RBP10.49□□□□□ -0.73
VMP1-201ENST00000262291 LTAP01374 205 aa10.49□□□□□ -0.73
VMP1-201ENST00000262291 EEF1AKMT3Q96AZ1 226 aa10.49□□□□□ -0.73
VMP1-201ENST00000262291 FMC1Q96HJ9 113 aa10.49□□□□□ -0.73
VMP1-201ENST00000262291 GAGE10A6NGK3 116 aa10.49□□□□□ -0.73
VMP1-201ENST00000262291 DSCR9P59020 149 aa10.49□□□□□ -0.73
VMP1-201ENST00000262291 RPS20P60866 119 aaKnown RBP10.49□□□□□ -0.73
VMP1-201ENST00000262291 ZFAND3Q9H8U3 227 aa10.49□□□□□ -0.73
VMP1-201ENST00000262291 SMIM27A0A1W2PRY6 76 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 PF4V1P10720 104 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 SLC25A34Q6PIV7 304 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 RNF182Q8N6D2 247 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 C8orf49Q96NF6 230 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 MLST8Q9BVC4 326 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 C7orf71A4D174 169 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 FAM231BA6NCW3 169 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 HLA-DQA1P01909 254 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 CAMPP49913 170 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 C10orf99Q6UWK7 81 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 NUP35Q8NFH5 326 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 WFDC12Q8WWY7 111 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 DUX5Q96PT3 197 aa10.48□□□□□ -0.73
VMP1-201ENST00000262291 CLPSL1A2RUU4 121 aa10.47□□□□□ -0.73
VMP1-201ENST00000262291 ZNF785A8K8V0 405 aa10.47□□□□□ -0.73
VMP1-201ENST00000262291 HIGD1CA8MV81 97 aa10.47□□□□□ -0.73
VMP1-201ENST00000262291 Q8TAT8 98 aa10.47□□□□□ -0.73
VMP1-201ENST00000262291 MBD6Q96DN6 1003 aa10.47□□□□□ -0.73
VMP1-201ENST00000262291 CR1P17927 2039 aa10.47□□□□□ -0.73
VMP1-201ENST00000262291 GDF5OSQ5U4N7 250 aa10.47□□□□□ -0.73
VMP1-201ENST00000262291 GRAMD2BQ96HH9 432 aa10.47□□□□□ -0.73
VMP1-201ENST00000262291 Q96MF0 132 aa10.47□□□□□ -0.73
VMP1-201ENST00000262291 TMEM70Q9BUB7 260 aa10.47□□□□□ -0.73
VMP1-201ENST00000262291 ZNF331Q9NQX6 463 aaPredicted RBP10.47□□□□□ -0.73
VMP1-201ENST00000262291 PSG8Q9UQ74 426 aa10.47□□□□□ -0.73
VMP1-201ENST00000262291 G3V4G9 280 aa10.46□□□□□ -0.73
VMP1-201ENST00000262291 P01737 135 aa10.46□□□□□ -0.73
VMP1-201ENST00000262291 C19orf54Q5BKX5 351 aa10.46□□□□□ -0.73
VMP1-201ENST00000262291 SAMD13Q5VXD3 122 aa10.46□□□□□ -0.73
VMP1-201ENST00000262291 DAZAP1Q96EP5 407 aaKnown RBP10.46□□□□□ -0.73
VMP1-201ENST00000262291 PGLYRP4Q96LB8 373 aa10.46□□□□□ -0.73
VMP1-201ENST00000262291 AAMDCQ9H7C9 122 aa10.46□□□□□ -0.73
VMP1-201ENST00000262291 PEF1Q9UBV8 284 aaKnown RBP10.46□□□□□ -0.73
VMP1-201ENST00000262291 SCGB2A1O75556 95 aa10.46□□□□□ -0.74
VMP1-201ENST00000262291 RPL7P18124 248 aaKnown RBP10.46□□□□□ -0.74
VMP1-201ENST00000262291 TCTAP57738 103 aa10.46□□□□□ -0.74
VMP1-201ENST00000262291 DEFB113Q30KQ7 82 aa10.46□□□□□ -0.74
VMP1-201ENST00000262291 IZUMO1RA6ND01 250 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms