RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 LEPP41159 167 aa10.17□□□□□ -0.78
SNX1-201ENST00000261889 OR2K2Q8NGT1 345 aa10.17□□□□□ -0.78
SNX1-201ENST00000261889 FAM90A27PA6NNH2 459 aa10.16□□□□□ -0.78
SNX1-201ENST00000261889 GFRALQ6UXV0 394 aa10.16□□□□□ -0.78
SNX1-201ENST00000261889 ZANQ9Y493 2812 aa10.16□□□□□ -0.78
SNX1-201ENST00000261889 PPIAL4CA0A0B4J2A2 164 aa10.16□□□□□ -0.78
SNX1-201ENST00000261889 BUB1B-PAK6H3BSN5 160 aa10.16□□□□□ -0.78
SNX1-201ENST00000261889 K7ERU9 68 aa10.16□□□□□ -0.78
SNX1-201ENST00000261889 PPIAL4GP0DN37 164 aa10.16□□□□□ -0.78
SNX1-201ENST00000261889 FOXC2Q99958 501 aa10.16□□□□□ -0.78
SNX1-201ENST00000261889 ZNF492Q9P255 531 aa10.16□□□□□ -0.78
SNX1-201ENST00000261889 HIVEP3Q5T1R4 2406 aa10.16□□□□□ -0.78
SNX1-201ENST00000261889 TGFAP01135 160 aa10.15□□□□□ -0.78
SNX1-201ENST00000261889 EFNA4P52798 201 aa10.15□□□□□ -0.78
SNX1-201ENST00000261889 DLX6P56179 175 aa10.15□□□□□ -0.78
SNX1-201ENST00000261889 SMAGPQ0VAQ4 97 aa10.15□□□□□ -0.78
SNX1-201ENST00000261889 ORMDL3Q8N138 153 aa10.15□□□□□ -0.78
SNX1-201ENST00000261889 NPIPB6E9PJ23 425 aa10.15□□□□□ -0.78
SNX1-201ENST00000261889 NDUFS7O75251 213 aa10.15□□□□□ -0.78
SNX1-201ENST00000261889 TRGV3P03979 118 aa10.15□□□□□ -0.78
SNX1-201ENST00000261889 Q5PR19 223 aa10.15□□□□□ -0.78
SNX1-201ENST00000261889 LINC00574Q9H8X3 128 aa10.15□□□□□ -0.78
SNX1-201ENST00000261889 TEX48A0A1B0GUV7 120 aa10.15□□□□□ -0.79
SNX1-201ENST00000261889 SMIM15Q7Z3B0 74 aa10.15□□□□□ -0.79
SNX1-201ENST00000261889 SH2D6Q7Z4S9 175 aa10.15□□□□□ -0.79
SNX1-201ENST00000261889 SMAD7O15105 426 aaKnown RBP10.14□□□□□ -0.79
SNX1-201ENST00000261889 SHANK2-AS3Q9BTD1 123 aa10.14□□□□□ -0.79
SNX1-201ENST00000261889 NDUFA3O95167 84 aa10.14□□□□□ -0.79
SNX1-201ENST00000261889 MC5RP33032 325 aa10.14□□□□□ -0.79
SNX1-201ENST00000261889 LGALS7P47929 136 aa10.14□□□□□ -0.79
SNX1-201ENST00000261889 EMP1P54849 157 aa10.14□□□□□ -0.79
SNX1-201ENST00000261889 FAM104BQ5XKR9 115 aa10.14□□□□□ -0.79
SNX1-201ENST00000261889 ABHD17AQ96GS6 310 aa10.14□□□□□ -0.79
SNX1-201ENST00000261889 PLP1P60201 277 aa10.14□□□□□ -0.79
SNX1-201ENST00000261889 ECSCRQ19T08 205 aa10.14□□□□□ -0.79
SNX1-201ENST00000261889 FAM71F2Q6NXP2 309 aa10.14□□□□□ -0.79
SNX1-201ENST00000261889 AAMDCQ9H7C9 122 aa10.14□□□□□ -0.79
SNX1-201ENST00000261889 TMEM238C9JI98 176 aa10.13□□□□□ -0.79
SNX1-201ENST00000261889 Q8NA96 180 aa10.13□□□□□ -0.79
SNX1-201ENST00000261889 TRAV40A0A0B4J280 105 aa10.13□□□□□ -0.79
SNX1-201ENST00000261889 C9orf118A6NHY6 69 aa10.13□□□□□ -0.79
SNX1-201ENST00000261889 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.13□□□□□ -0.79
SNX1-201ENST00000261889 HBDP02042 147 aa10.13□□□□□ -0.79
SNX1-201ENST00000261889 APOBEC3AP31941 199 aaPredicted RBP10.13□□□□□ -0.79
SNX1-201ENST00000261889 IL17RELQ6ZVW7 336 aa10.13□□□□□ -0.79
SNX1-201ENST00000261889 DYNAPQ8N1N2 210 aa10.13□□□□□ -0.79
SNX1-201ENST00000261889 IGHV3OR16-10A0A075B7F0 116 aa10.12□□□□□ -0.79
SNX1-201ENST00000261889 K7EQM0 130 aa10.12□□□□□ -0.79
SNX1-201ENST00000261889 PPBPP02775 128 aa10.12□□□□□ -0.79
SNX1-201ENST00000261889 ZC2HC1BQ5TFG8 222 aa10.12□□□□□ -0.79
SNX1-201ENST00000261889 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.12□□□□□ -0.79
SNX1-201ENST00000261889 CT83Q5H943 113 aa10.12□□□□□ -0.79
SNX1-201ENST00000261889 TMEM158Q8WZ71 300 aa10.12□□□□□ -0.79
SNX1-201ENST00000261889 IGF1P05019 195 aa10.12□□□□□ -0.79
SNX1-201ENST00000261889 FAM169BQ8N8A8 192 aa10.12□□□□□ -0.79
SNX1-201ENST00000261889 GFRA4Q9GZZ7 299 aa10.12□□□□□ -0.79
SNX1-201ENST00000261889 H3BRN7 92 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 PRRG2O14669 202 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 IGLV1-47P01700 117 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 INSL3P51460 131 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 WFDC2Q14508 124 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 FAM162BQ5T6X4 162 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 ADAMTSL5Q6ZMM2 481 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 NEGR1Q7Z3B1 354 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 MAPKAPK5-AS1Q8N8E1 139 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 MS4A6AQ9H2W1 248 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 NACAE9PAV3 2078 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 MYO9AB2RTY4 2548 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 H3BMG7 143 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 ATP5IP56385 69 aaPredicted RBP10.11□□□□□ -0.79
SNX1-201ENST00000261889 ARL6IP6Q8N6S5 226 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 ARPC1AQ92747 370 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 PTPN13Q12923 2485 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 SAMD5Q5TGI4 173 aa10.11□□□□□ -0.79
SNX1-201ENST00000261889 A6NDN8 102 aa10.1□□□□□ -0.79
SNX1-201ENST00000261889 BOD1L2Q8IYS8 172 aa10.1□□□□□ -0.79
SNX1-201ENST00000261889 PRR25Q96S07 402 aa10.1□□□□□ -0.79
SNX1-201ENST00000261889 SOX21Q9Y651 276 aaPredicted RBP10.1□□□□□ -0.79
SNX1-201ENST00000261889 A0A1W2PPM0 123 aa10.1□□□□□ -0.79
SNX1-201ENST00000261889 WI2-2373I1.2A0A1W2PRP0 233 aa10.1□□□□□ -0.79
SNX1-201ENST00000261889 LINC01548A6NM66 108 aa10.1□□□□□ -0.79
SNX1-201ENST00000261889 SHISA9B4DS77 424 aa10.1□□□□□ -0.79
SNX1-201ENST00000261889 K7EP34 96 aa10.1□□□□□ -0.79
SNX1-201ENST00000261889 CRYGBP07316 175 aa10.1□□□□□ -0.79
SNX1-201ENST00000261889 CDSNQ15517 529 aa10.1□□□□□ -0.79
SNX1-201ENST00000261889 GTF2H5Q6ZYL4 71 aa10.1□□□□□ -0.79
SNX1-201ENST00000261889 C3orf36Q3SXR2 165 aa10.09□□□□□ -0.79
SNX1-201ENST00000261889 UFSP1Q6NVU6 142 aa10.09□□□□□ -0.79
SNX1-201ENST00000261889 FAM57AQ8TBR7 257 aa10.09□□□□□ -0.79
SNX1-201ENST00000261889 GLMPQ8WWB7 406 aa10.09□□□□□ -0.79
SNX1-201ENST00000261889 CFHR4Q92496 578 aa10.09□□□□□ -0.79
SNX1-201ENST00000261889 JKAMPQ9P055 326 aa10.09□□□□□ -0.79
SNX1-201ENST00000261889 RBPJQ06330 500 aa10.09□□□□□ -0.79
SNX1-201ENST00000261889 ETDBQ3ZM63 59 aa10.09□□□□□ -0.79
SNX1-201ENST00000261889 MRPL35Q9NZE8 188 aaKnown RBP10.09□□□□□ -0.79
SNX1-201ENST00000261889 C11orf21Q9P2W6 132 aa10.09□□□□□ -0.79
SNX1-201ENST00000261889 FANCD2OSQ96PS1 177 aa10.09□□□□□ -0.79
SNX1-201ENST00000261889 CHAC1Q9BUX1 264 aa10.09□□□□□ -0.79
SNX1-201ENST00000261889 SMAD5-AS1Q9Y6J3 95 aa10.09□□□□□ -0.79
SNX1-201ENST00000261889 WNK1Q9H4A3 2382 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms