RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 CITED1Q99966 193 aa12.61□□□□□ -0.39
HLA-F-216ENST00000259951 NDFIP1Q9BT67 221 aa12.61□□□□□ -0.39
HLA-F-216ENST00000259951 COL6A5A8TX70 2615 aa12.6□□□□□ -0.39
HLA-F-216ENST00000259951 DEFB114Q30KQ6 69 aa12.6□□□□□ -0.39
HLA-F-216ENST00000259951 TMEM78Q5T7P6 136 aa12.6□□□□□ -0.39
HLA-F-216ENST00000259951 NHLRC2Q8NBF2 726 aa12.6□□□□□ -0.39
HLA-F-216ENST00000259951 OR10J6PQ8NGY7 276 aa12.6□□□□□ -0.39
HLA-F-216ENST00000259951 C20orf173Q96LM9 149 aa12.6□□□□□ -0.39
HLA-F-216ENST00000259951 OSTCQ9NRP0 149 aa12.6□□□□□ -0.39
HLA-F-216ENST00000259951 TMA7Q9Y2S6 64 aaKnown RBP12.6□□□□□ -0.39
HLA-F-216ENST00000259951 SELENOKQ9Y6D0 94 aa12.6□□□□□ -0.39
HLA-F-216ENST00000259951 PRAC2D3DTV9 90 aa12.59□□□□□ -0.39
HLA-F-216ENST00000259951 TFPI2P48307 235 aa12.59□□□□□ -0.39
HLA-F-216ENST00000259951 OR5I1Q13606 314 aa12.59□□□□□ -0.39
HLA-F-216ENST00000259951 C9orf47Q6ZRZ4 202 aa12.59□□□□□ -0.39
HLA-F-216ENST00000259951 VGLL1Q99990 258 aa12.59□□□□□ -0.39
HLA-F-216ENST00000259951 IBA57Q5T440 356 aaKnown RBP12.59□□□□□ -0.39
HLA-F-216ENST00000259951 FAM231DQ6ZW35 169 aa12.59□□□□□ -0.39
HLA-F-216ENST00000259951 CT45A10P0DMU9 189 aa12.58□□□□□ -0.4
HLA-F-216ENST00000259951 ZNF138P52744 262 aa12.58□□□□□ -0.4
HLA-F-216ENST00000259951 TMEM61Q8N0U2 210 aa12.58□□□□□ -0.4
HLA-F-216ENST00000259951 LINC00477Q96M19 166 aa12.58□□□□□ -0.4
HLA-F-216ENST00000259951 PRR25Q96S07 402 aa12.58□□□□□ -0.4
HLA-F-216ENST00000259951 PPP1R14DQ9NXH3 145 aa12.58□□□□□ -0.4
HLA-F-216ENST00000259951 ZNF492Q9P255 531 aa12.58□□□□□ -0.4
HLA-F-216ENST00000259951 S100PP25815 95 aa12.57□□□□□ -0.4
HLA-F-216ENST00000259951 KRTAP24-1Q3LI83 254 aa12.57□□□□□ -0.4
HLA-F-216ENST00000259951 PRR27Q6MZM9 219 aa12.57□□□□□ -0.4
HLA-F-216ENST00000259951 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.57□□□□□ -0.4
HLA-F-216ENST00000259951 DAZAP1Q96EP5 407 aaKnown RBP12.57□□□□□ -0.4
HLA-F-216ENST00000259951 SPAG8Q99932 426 aaPredicted RBP12.57□□□□□ -0.4
HLA-F-216ENST00000259951 AGPAT4-IT1Q9H0P7 198 aa12.57□□□□□ -0.4
HLA-F-216ENST00000259951 LENEPQ9Y5L5 61 aa12.57□□□□□ -0.4
HLA-F-216ENST00000259951 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
HLA-F-216ENST00000259951 SAP30O75446 220 aa12.56□□□□□ -0.4
HLA-F-216ENST00000259951 ZNF688P0C7X2 276 aa12.56□□□□□ -0.4
HLA-F-216ENST00000259951 PRB4P10163 310 aaPredicted RBP12.56□□□□□ -0.4
HLA-F-216ENST00000259951 ERCC8Q13216 396 aa12.56□□□□□ -0.4
HLA-F-216ENST00000259951 CD300EQ496F6 205 aaPredicted RBP12.56□□□□□ -0.4
HLA-F-216ENST00000259951 PSMG4Q5JS54 123 aa12.56□□□□□ -0.4
HLA-F-216ENST00000259951 COX8CQ7Z4L0 72 aa12.56□□□□□ -0.4
HLA-F-216ENST00000259951 OR8A1Q8NGG7 326 aa12.56□□□□□ -0.4
HLA-F-216ENST00000259951 OR2K2Q8NGT1 345 aa12.56□□□□□ -0.4
HLA-F-216ENST00000259951 IMMP2LQ96T52 175 aa12.56□□□□□ -0.4
HLA-F-216ENST00000259951 RNASE7Q9H1E1 156 aaKnown RBP12.56□□□□□ -0.4
HLA-F-216ENST00000259951 FBN1P35555 2871 aaKnown RBP12.56□□□□□ -0.4
HLA-F-216ENST00000259951 NPIPB6E9PJ23 425 aa12.55□□□□□ -0.4
HLA-F-216ENST00000259951 KCNIP4Q6PIL6 250 aa12.55□□□□□ -0.4
HLA-F-216ENST00000259951 LINC00482Q8N8I6 264 aa12.55□□□□□ -0.4
HLA-F-216ENST00000259951 MDFIQ99750 246 aa12.55□□□□□ -0.4
HLA-F-216ENST00000259951 GATCO43716 136 aaKnown RBP12.55□□□□□ -0.4
HLA-F-216ENST00000259951 HIST1H1AQ02539 215 aaPredicted RBP12.55□□□□□ -0.4
HLA-F-216ENST00000259951 SMUG1Q53HV7 270 aa12.55□□□□□ -0.4
HLA-F-216ENST00000259951 Q8TAT8 98 aa12.55□□□□□ -0.4
HLA-F-216ENST00000259951 ZC2HC1AQ96GY0 325 aa12.55□□□□□ -0.4
HLA-F-216ENST00000259951 ZNF705GA8MUZ8 300 aaPredicted RBP12.54□□□□□ -0.4
HLA-F-216ENST00000259951 P01737 135 aa12.54□□□□□ -0.4
HLA-F-216ENST00000259951 EBLN2Q6P2I7 272 aa12.54□□□□□ -0.4
HLA-F-216ENST00000259951 NUDT10Q8NFP7 164 aa12.54□□□□□ -0.4
HLA-F-216ENST00000259951 NUDT11Q96G61 164 aa12.54□□□□□ -0.4
HLA-F-216ENST00000259951 V9GYV3 84 aa12.54□□□□□ -0.4
HLA-F-216ENST00000259951 TRBV7-9A0A0J9YWB2 115 aa12.53□□□□□ -0.4
HLA-F-216ENST00000259951 C19orf71A6NCJ1 209 aa12.53□□□□□ -0.4
HLA-F-216ENST00000259951 FAM24BQ8N5W8 94 aa12.53□□□□□ -0.4
HLA-F-216ENST00000259951 OR4B1Q8NGF8 309 aa12.53□□□□□ -0.4
HLA-F-216ENST00000259951 BTF3L4Q96K17 158 aa12.53□□□□□ -0.4
HLA-F-216ENST00000259951 C8orf49Q96NF6 230 aa12.53□□□□□ -0.4
HLA-F-216ENST00000259951 IL36BQ9NZH7 164 aa12.53□□□□□ -0.4
HLA-F-216ENST00000259951 DUSP14O95147 198 aaKnown RBP12.52□□□□□ -0.4
HLA-F-216ENST00000259951 FAM162BQ5T6X4 162 aa12.52□□□□□ -0.4
HLA-F-216ENST00000259951 ZNF747Q9BV97 191 aa12.52□□□□□ -0.4
HLA-F-216ENST00000259951 URGCP-MRPS24S4R325 110 aa12.52□□□□□ -0.4
HLA-F-216ENST00000259951 IGLV1-51P01701 117 aa12.51□□□□□ -0.41
HLA-F-216ENST00000259951 PFN1P07737 140 aaKnown RBP12.51□□□□□ -0.41
HLA-F-216ENST00000259951 CMC4P56277 68 aaPredicted RBP12.51□□□□□ -0.41
HLA-F-216ENST00000259951 ELOBQ15370 118 aa12.51□□□□□ -0.41
HLA-F-216ENST00000259951 CT83Q5H943 113 aa12.51□□□□□ -0.41
HLA-F-216ENST00000259951 FOXI2Q6ZQN5 318 aa12.51□□□□□ -0.41
HLA-F-216ENST00000259951 TMEM158Q8WZ71 300 aa12.51□□□□□ -0.41
HLA-F-216ENST00000259951 ASCL2Q99929 193 aa12.51□□□□□ -0.41
HLA-F-216ENST00000259951 GPR61Q9BZJ8 451 aa12.51□□□□□ -0.41
HLA-F-216ENST00000259951 RPP21Q9H633 154 aaKnown RBP12.51□□□□□ -0.41
HLA-F-216ENST00000259951 A0A0J9YX75 114 aa12.51□□□□□ -0.41
HLA-F-216ENST00000259951 COLCA2A8K830 154 aa12.51□□□□□ -0.41
HLA-F-216ENST00000259951 F6UB75 175 aa12.51□□□□□ -0.41
HLA-F-216ENST00000259951 ZNF705DP0CH99 300 aaPredicted RBP12.51□□□□□ -0.41
HLA-F-216ENST00000259951 ZNF705BP0CI00 300 aaPredicted RBP12.51□□□□□ -0.41
HLA-F-216ENST00000259951 YPEL4Q96NS1 127 aa12.51□□□□□ -0.41
HLA-F-216ENST00000259951 SAV1Q9H4B6 383 aaPredicted RBP12.51□□□□□ -0.41
HLA-F-216ENST00000259951 STAB1Q9NY15 2570 aa12.5□□□□□ -0.41
HLA-F-216ENST00000259951 TRAV9-1A0A075B6T8 112 aa12.5□□□□□ -0.41
HLA-F-216ENST00000259951 INSL3P51460 131 aa12.5□□□□□ -0.41
HLA-F-216ENST00000259951 LINC00322Q6ZN03 302 aaPredicted RBP12.5□□□□□ -0.41
HLA-F-216ENST00000259951 ODF3Q96PU9 254 aa12.5□□□□□ -0.41
HLA-F-216ENST00000259951 ZNF256Q9Y2P7 627 aaPredicted RBP12.5□□□□□ -0.41
HLA-F-216ENST00000259951 FABP5P3A8MUU1 101 aa12.49□□□□□ -0.41
HLA-F-216ENST00000259951 A8MWL6 223 aa12.49□□□□□ -0.41
HLA-F-216ENST00000259951 DEFB131AP59861 70 aa12.49□□□□□ -0.41
HLA-F-216ENST00000259951 RPL19P84098 196 aaKnown RBP12.49□□□□□ -0.41
HLA-F-216ENST00000259951 C3orf56Q8N813 242 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms