RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 SVBPQ8N300 66 aa9.66□□□□□ -0.86
LSM8-201ENST00000249299 OR8A1Q8NGG7 326 aa9.66□□□□□ -0.86
LSM8-201ENST00000249299 C20orf173Q96LM9 149 aa9.66□□□□□ -0.86
LSM8-201ENST00000249299 LINC00052Q96N35 136 aa9.66□□□□□ -0.86
LSM8-201ENST00000249299 ODF3Q96PU9 254 aa9.66□□□□□ -0.86
LSM8-201ENST00000249299 ZNF705FA8MVS1 300 aaPredicted RBP9.65□□□□□ -0.86
LSM8-201ENST00000249299 B4DEV8 164 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 NPIPB6E9PJ23 425 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 ZNF688P0C7X2 276 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 ADCYAP1P18509 176 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 HLA-DMBP28068 263 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 TFPI2P48307 235 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 CEBPGP53567 150 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 GUCA2BQ16661 112 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 PSMG4Q5JS54 123 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 TMEM78Q5T7P6 136 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 IGFL4Q6B9Z1 124 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 BAGE2Q86Y30 109 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 IGF2BP2-AS1Q96M15 143 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 DERL1Q9BUN8 251 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 MLST8Q9BVC4 326 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 PSG8Q9UQ74 426 aa9.65□□□□□ -0.86
LSM8-201ENST00000249299 VWFP04275 2813 aa9.65□□□□□ -0.87
LSM8-201ENST00000249299 TRBV20OR9-2A0A075B6H5 130 aa9.64□□□□□ -0.87
LSM8-201ENST00000249299 A8MTW9 85 aa9.64□□□□□ -0.87
LSM8-201ENST00000249299 ZNF138P52744 262 aa9.64□□□□□ -0.87
LSM8-201ENST00000249299 ZNF674Q2M3X9 581 aa9.64□□□□□ -0.87
LSM8-201ENST00000249299 CENPWQ5EE01 88 aa9.64□□□□□ -0.87
LSM8-201ENST00000249299 TMEM183AQ8IXX5 376 aa9.64□□□□□ -0.87
LSM8-201ENST00000249299 SPATA3Q8NHX4 192 aa9.64□□□□□ -0.87
LSM8-201ENST00000249299 TVP23CQ96ET8 276 aa9.64□□□□□ -0.87
LSM8-201ENST00000249299 NDFIP1Q9BT67 221 aa9.64□□□□□ -0.87
LSM8-201ENST00000249299 SAV1Q9H4B6 383 aaPredicted RBP9.64□□□□□ -0.87
LSM8-201ENST00000249299 SDF2L1Q9HCN8 221 aa9.64□□□□□ -0.87
LSM8-201ENST00000249299 IGKV2-40A0A087WW87 121 aaPredicted RBP9.63□□□□□ -0.87
LSM8-201ENST00000249299 A0A0J9YX75 114 aa9.63□□□□□ -0.87
LSM8-201ENST00000249299 IZUMO1RA6ND01 250 aa9.63□□□□□ -0.87
LSM8-201ENST00000249299 PRAC2D3DTV9 90 aa9.63□□□□□ -0.87
LSM8-201ENST00000249299 SNAPINO95295 136 aa9.63□□□□□ -0.87
LSM8-201ENST00000249299 IGKV2D-40P01614 121 aaPredicted RBP9.63□□□□□ -0.87
LSM8-201ENST00000249299 Q86TA4 180 aa9.63□□□□□ -0.87
LSM8-201ENST00000249299 LINC01551Q86U37 167 aa9.63□□□□□ -0.87
LSM8-201ENST00000249299 FAM24BQ8N5W8 94 aa9.63□□□□□ -0.87
LSM8-201ENST00000249299 LINC00479Q96M42 142 aa9.63□□□□□ -0.87
LSM8-201ENST00000249299 PRR25Q96S07 402 aa9.63□□□□□ -0.87
LSM8-201ENST00000249299 AGPAT4-IT1Q9H0P7 198 aa9.63□□□□□ -0.87
LSM8-201ENST00000249299 MAP6D1Q9H9H5 199 aa9.63□□□□□ -0.87
LSM8-201ENST00000249299 ZNF492Q9P255 531 aa9.63□□□□□ -0.87
LSM8-201ENST00000249299 RPH3ALQ9UNE2 315 aa9.63□□□□□ -0.87
LSM8-201ENST00000249299 TRAV34A0A0B4J273 112 aa9.62□□□□□ -0.87
LSM8-201ENST00000249299 OR11H12B2RN74 326 aa9.62□□□□□ -0.87
LSM8-201ENST00000249299 HLA-DRB4P13762 266 aa9.62□□□□□ -0.87
LSM8-201ENST00000249299 DEFB131AP59861 70 aa9.62□□□□□ -0.87
LSM8-201ENST00000249299 VGLL1Q99990 258 aa9.62□□□□□ -0.87
LSM8-201ENST00000249299 HLA-DRB4X5D2U9 266 aa9.62□□□□□ -0.87
LSM8-201ENST00000249299 TRAV8-1A0A0A6YYK1 113 aa9.61□□□□□ -0.87
LSM8-201ENST00000249299 GCGP01275 180 aa9.61□□□□□ -0.87
LSM8-201ENST00000249299 APOC3P02656 99 aa9.61□□□□□ -0.87
LSM8-201ENST00000249299 IGLL1P15814 213 aa9.61□□□□□ -0.87
LSM8-201ENST00000249299 CRISP2P16562 243 aa9.61□□□□□ -0.87
LSM8-201ENST00000249299 TSPOP30536 169 aa9.61□□□□□ -0.87
LSM8-201ENST00000249299 RHEBQ15382 184 aa9.61□□□□□ -0.87
LSM8-201ENST00000249299 ODF3L2Q3SX64 289 aa9.61□□□□□ -0.87
LSM8-201ENST00000249299 PRNTQ86SH4 94 aa9.61□□□□□ -0.87
LSM8-201ENST00000249299 GTSCR1Q86UQ5 136 aa9.61□□□□□ -0.87
LSM8-201ENST00000249299 OCC1Q8TAD7 63 aa9.61□□□□□ -0.87
LSM8-201ENST00000249299 FAM19A4Q96LR4 140 aa9.61□□□□□ -0.87
LSM8-201ENST00000249299 H3BMM0 161 aa9.6□□□□□ -0.87
LSM8-201ENST00000249299 IGLV2-8P01709 118 aa9.6□□□□□ -0.87
LSM8-201ENST00000249299 RPL23P62829 140 aaKnown RBP9.6□□□□□ -0.87
LSM8-201ENST00000249299 HIST1H1AQ02539 215 aaPredicted RBP9.6□□□□□ -0.87
LSM8-201ENST00000249299 EGFEM1PQ0D2K5 195 aa9.6□□□□□ -0.87
LSM8-201ENST00000249299 APRG1Q8IVJ8 170 aa9.6□□□□□ -0.87
LSM8-201ENST00000249299 C19orf73Q9NVV2 129 aa9.6□□□□□ -0.87
LSM8-201ENST00000249299 SELENOKQ9Y6D0 94 aa9.6□□□□□ -0.87
LSM8-201ENST00000249299 A0A087WWC5 75 aa9.59□□□□□ -0.87
LSM8-201ENST00000249299 PPP1R2P9O14990 202 aa9.59□□□□□ -0.87
LSM8-201ENST00000249299 AMBPP02760 352 aa9.59□□□□□ -0.87
LSM8-201ENST00000249299 CT45A10P0DMU9 189 aa9.59□□□□□ -0.87
LSM8-201ENST00000249299 SMUG1Q53HV7 270 aa9.59□□□□□ -0.87
LSM8-201ENST00000249299 FAM231DQ6ZW35 169 aa9.59□□□□□ -0.87
LSM8-201ENST00000249299 CLRN3Q8NCR9 226 aa9.59□□□□□ -0.87
LSM8-201ENST00000249299 ASCL2Q99929 193 aa9.59□□□□□ -0.87
LSM8-201ENST00000249299 CTDSP1Q9GZU7 261 aa9.59□□□□□ -0.87
LSM8-201ENST00000249299 TMEM242Q9NWH2 141 aa9.59□□□□□ -0.87
LSM8-201ENST00000249299 ANK2Q01484 3957 aa9.59□□□□□ -0.87
LSM8-201ENST00000249299 MT-ND4LP03901 98 aa9.58□□□□□ -0.88
LSM8-201ENST00000249299 LEPP41159 167 aa9.58□□□□□ -0.88
LSM8-201ENST00000249299 NUTF2P61970 127 aaKnown RBP9.58□□□□□ -0.88
LSM8-201ENST00000249299 ERCC8Q13216 396 aa9.58□□□□□ -0.88
LSM8-201ENST00000249299 ADIRFQ15847 76 aa9.58□□□□□ -0.88
LSM8-201ENST00000249299 ISOC2Q96AB3 205 aa9.58□□□□□ -0.88
LSM8-201ENST00000249299 ANAPC16Q96DE5 110 aa9.58□□□□□ -0.88
LSM8-201ENST00000249299 OSTCQ9NRP0 149 aa9.58□□□□□ -0.88
LSM8-201ENST00000249299 NOTCH3Q9UM47 2321 aa9.58□□□□□ -0.88
LSM8-201ENST00000249299 TRRAPQ9Y4A5 3859 aa9.58□□□□□ -0.88
LSM8-201ENST00000249299 KLLNB2CW77 178 aa9.57□□□□□ -0.88
LSM8-201ENST00000249299 F6UB75 175 aa9.57□□□□□ -0.88
LSM8-201ENST00000249299 M0R036 132 aa9.57□□□□□ -0.88
LSM8-201ENST00000249299 ACTL10Q5JWF8 245 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms