RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 SH3BGRL3Q9H299 93 aa17.41■□□□□ 0.38
SDF2L1-201ENST00000248958 OTORQ9NRC9 128 aa17.41■□□□□ 0.38
SDF2L1-201ENST00000248958 HMSDA8MTL9 139 aa17.4■□□□□ 0.38
SDF2L1-201ENST00000248958 ZNF493Q6ZR52 646 aa17.4■□□□□ 0.38
SDF2L1-201ENST00000248958 RAB24Q969Q5 203 aa17.4■□□□□ 0.38
SDF2L1-201ENST00000248958 C16orf74Q96GX8 76 aa17.4■□□□□ 0.38
SDF2L1-201ENST00000248958 RYR2Q92736 4967 aa17.4■□□□□ 0.38
SDF2L1-201ENST00000248958 IGKV2-40A0A087WW87 121 aaPredicted RBP17.39■□□□□ 0.37
SDF2L1-201ENST00000248958 DEFB131BA0A096LNP1 70 aa17.39■□□□□ 0.37
SDF2L1-201ENST00000248958 TRBV7-9A0A0J9YWB2 115 aa17.39■□□□□ 0.37
SDF2L1-201ENST00000248958 LYRM9A8MSI8 78 aa17.39■□□□□ 0.37
SDF2L1-201ENST00000248958 SMLR1H3BR10 107 aa17.39■□□□□ 0.37
SDF2L1-201ENST00000248958 IGKV2D-40P01614 121 aaPredicted RBP17.39■□□□□ 0.37
SDF2L1-201ENST00000248958 CRISP2P16562 243 aa17.39■□□□□ 0.37
SDF2L1-201ENST00000248958 KIR3DS1Q14943 382 aa17.39■□□□□ 0.37
SDF2L1-201ENST00000248958 ZNF492Q9P255 531 aa17.39■□□□□ 0.37
SDF2L1-201ENST00000248958 KLLNB2CW77 178 aa17.38■□□□□ 0.37
SDF2L1-201ENST00000248958 J3KRW8 73 aa17.38■□□□□ 0.37
SDF2L1-201ENST00000248958 HMGB3O15347 200 aaKnown RBP17.38■□□□□ 0.37
SDF2L1-201ENST00000248958 EIF3GO75821 320 aaKnown RBP eCLIP17.38■□□□□ 0.372e-9■■□□□ 13.6
SDF2L1-201ENST00000248958 ARL14EPLP0DKL9 152 aa17.38■□□□□ 0.37
SDF2L1-201ENST00000248958 ZNF767PQ75MW2 155 aa17.38■□□□□ 0.37
SDF2L1-201ENST00000248958 CCDC28AQ8IWP9 274 aa17.38■□□□□ 0.37
SDF2L1-201ENST00000248958 KCNRGQ8N5I3 272 aa17.38■□□□□ 0.37
SDF2L1-201ENST00000248958 CMTM2Q8TAZ6 248 aa17.38■□□□□ 0.37
SDF2L1-201ENST00000248958 LINC00476Q8WZB0 136 aa17.38■□□□□ 0.37
SDF2L1-201ENST00000248958 SACSQ9NZJ4 4579 aa17.38■□□□□ 0.37
SDF2L1-201ENST00000248958 C7orf71A4D174 169 aa17.37■□□□□ 0.37
SDF2L1-201ENST00000248958 PGPA6NDG6 321 aa17.37■□□□□ 0.37
SDF2L1-201ENST00000248958 IGLL5B9A064 214 aa17.37■□□□□ 0.37
SDF2L1-201ENST00000248958 DIRC3C9JPN6 131 aa17.37■□□□□ 0.37
SDF2L1-201ENST00000248958 HTN1P15515 57 aa17.37■□□□□ 0.37
SDF2L1-201ENST00000248958 AZU1P20160 251 aa17.37■□□□□ 0.37
SDF2L1-201ENST00000248958 ZNF138P52744 262 aa17.37■□□□□ 0.37
SDF2L1-201ENST00000248958 TMEM263Q8WUH6 116 aaKnown RBP17.37■□□□□ 0.37
SDF2L1-201ENST00000248958 VGLL1Q99990 258 aa17.37■□□□□ 0.37
SDF2L1-201ENST00000248958 ARPC5LQ9BPX5 153 aa17.37■□□□□ 0.37
SDF2L1-201ENST00000248958 PYGO2Q9BRQ0 406 aa17.37■□□□□ 0.37
SDF2L1-201ENST00000248958 CYTL1Q9NRR1 136 aa17.37■□□□□ 0.37
SDF2L1-201ENST00000248958 TRAV12-3A0A0B4J271 114 aa17.36■□□□□ 0.37
SDF2L1-201ENST00000248958 A0A0D9SG52 128 aa17.36■□□□□ 0.37
SDF2L1-201ENST00000248958 CXorf1O96002 111 aa17.36■□□□□ 0.37
SDF2L1-201ENST00000248958 PRM2P04554 102 aa17.36■□□□□ 0.37
SDF2L1-201ENST00000248958 SUN5Q8TC36 379 aa17.36■□□□□ 0.37
SDF2L1-201ENST00000248958 TMEM167BQ9NRX6 74 aa17.36■□□□□ 0.37
SDF2L1-201ENST00000248958 GPX1P07203 203 aa17.35■□□□□ 0.37
SDF2L1-201ENST00000248958 GCHFRP30047 84 aa17.35■□□□□ 0.37
SDF2L1-201ENST00000248958 DAD1P61803 113 aa17.35■□□□□ 0.37
SDF2L1-201ENST00000248958 AKR1C8PQ5T2L2 129 aa17.35■□□□□ 0.37
SDF2L1-201ENST00000248958 RNASE8Q8TDE3 154 aaKnown RBP17.35■□□□□ 0.37
SDF2L1-201ENST00000248958 LENEPQ9Y5L5 61 aa17.35■□□□□ 0.37
SDF2L1-201ENST00000248958 PLAC8L1A1L4L8 177 aa17.34■□□□□ 0.37
SDF2L1-201ENST00000248958 LY6G6CO95867 125 aa17.34■□□□□ 0.37
SDF2L1-201ENST00000248958 TMED6Q8WW62 240 aa17.34■□□□□ 0.37
SDF2L1-201ENST00000248958 HYLS1Q96M11 299 aa17.34■□□□□ 0.37
SDF2L1-201ENST00000248958 TIMM8BQ9Y5J9 83 aaPredicted RBP17.34■□□□□ 0.37
SDF2L1-201ENST00000248958 LYSTQ99698 3801 aa17.33■□□□□ 0.37
SDF2L1-201ENST00000248958 CTXND1A0A1B0GTU2 59 aa17.33■□□□□ 0.36
SDF2L1-201ENST00000248958 LGALS9CQ6DKI2 356 aa17.33■□□□□ 0.36
SDF2L1-201ENST00000248958 OR11H4Q8NGC9 324 aa17.33■□□□□ 0.36
SDF2L1-201ENST00000248958 ST6GAL2Q96JF0 529 aa17.33■□□□□ 0.36
SDF2L1-201ENST00000248958 APLNQ9ULZ1 77 aa17.33■□□□□ 0.36
SDF2L1-201ENST00000248958 PLECQ15149 4684 aaKnown RBP17.33■□□□□ 0.36
SDF2L1-201ENST00000248958 IGHV4-4A0A075B6R2 117 aa17.32■□□□□ 0.36
SDF2L1-201ENST00000248958 ZNF324O75467 553 aaPredicted RBP17.32■□□□□ 0.36
SDF2L1-201ENST00000248958 ZFAND2AQ8N6M9 145 aa17.32■□□□□ 0.36
SDF2L1-201ENST00000248958 FAM210BQ96KR6 192 aa17.32■□□□□ 0.36
SDF2L1-201ENST00000248958 LINC00467Q9BRT7 94 aa17.32■□□□□ 0.36
SDF2L1-201ENST00000248958 SERTM2A0A1B0GWG4 89 aa17.31■□□□□ 0.36
SDF2L1-201ENST00000248958 KANTRA0A1W2PQU2 76 aa17.31■□□□□ 0.36
SDF2L1-201ENST00000248958 RNASE4P34096 147 aaKnown RBP17.31■□□□□ 0.36
SDF2L1-201ENST00000248958 BTN1A1Q13410 526 aa17.31■□□□□ 0.36
SDF2L1-201ENST00000248958 EIF5AP63241 154 aaKnown RBP17.3■□□□□ 0.36
SDF2L1-201ENST00000248958 CD300CQ08708 224 aa17.3■□□□□ 0.36
SDF2L1-201ENST00000248958 Q6ZNX1 250 aa17.3■□□□□ 0.36
SDF2L1-201ENST00000248958 PLA2G2EQ9NZK7 142 aa17.3■□□□□ 0.36
SDF2L1-201ENST00000248958 SNURFLB1AK76 121 aa17.29■□□□□ 0.36
SDF2L1-201ENST00000248958 EIF4E3Q8N5X7 224 aaKnown RBP17.29■□□□□ 0.36
SDF2L1-201ENST00000248958 C5orf17Q8NAS9 161 aa17.29■□□□□ 0.36
SDF2L1-201ENST00000248958 ZNF680Q8NEM1 530 aa17.29■□□□□ 0.36
SDF2L1-201ENST00000248958 Q8TAT8 98 aa17.29■□□□□ 0.36
SDF2L1-201ENST00000248958 NDUFAF3Q9BU61 184 aa17.29■□□□□ 0.36
SDF2L1-201ENST00000248958 RPH3ALQ9UNE2 315 aa17.29■□□□□ 0.36
SDF2L1-201ENST00000248958 BCL2L11O43521 198 aa17.28■□□□□ 0.36
SDF2L1-201ENST00000248958 SEC11BP0C7V7 166 aa17.28■□□□□ 0.36
SDF2L1-201ENST00000248958 ZNF726P1Q15940 193 aa17.28■□□□□ 0.36
SDF2L1-201ENST00000248958 ANXA2RQ3ZCQ2 193 aa17.28■□□□□ 0.36
SDF2L1-201ENST00000248958 GOLT1AQ6ZVE7 132 aa17.28■□□□□ 0.36
SDF2L1-201ENST00000248958 SSX7Q7RTT5 188 aa17.28■□□□□ 0.36
SDF2L1-201ENST00000248958 A0A1W2PRE2 83 aa17.27■□□□□ 0.36
SDF2L1-201ENST00000248958 K7EQM0 130 aa17.27■□□□□ 0.36
SDF2L1-201ENST00000248958 DEFB130BP0DP73 79 aa17.27■□□□□ 0.36
SDF2L1-201ENST00000248958 DEFB130AP0DP74 79 aa17.27■□□□□ 0.36
SDF2L1-201ENST00000248958 IQCF2Q8IXL9 164 aa17.27■□□□□ 0.36
SDF2L1-201ENST00000248958 TCTE3Q8IZS6 198 aa17.27■□□□□ 0.36
SDF2L1-201ENST00000248958 ZNF471Q9BX82 626 aaPredicted RBP17.27■□□□□ 0.36
SDF2L1-201ENST00000248958 NOP10Q9NPE3 64 aaKnown RBP17.27■□□□□ 0.36
SDF2L1-201ENST00000248958 CBY3A6NI87 242 aa17.26■□□□□ 0.35
SDF2L1-201ENST00000248958 RGS13O14921 159 aa17.26■□□□□ 0.35
SDF2L1-201ENST00000248958 HTN3P15516 51 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms