RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 VGLL1Q99990 258 aa9.24□□□□□ -0.93
SOX9-201ENST00000245479 NPFFR1Q9GZQ6 430 aa9.24□□□□□ -0.93
SOX9-201ENST00000245479 MRPL36Q9P0J6 103 aaKnown RBP9.24□□□□□ -0.93
SOX9-201ENST00000245479 ZNF462Q96JM2 2506 aa9.24□□□□□ -0.93
SOX9-201ENST00000245479 NPIPB5A8MRT5 1133 aa9.24□□□□□ -0.93
SOX9-201ENST00000245479 MBD3L4A6NDZ8 208 aaPredicted RBP9.24□□□□□ -0.93
SOX9-201ENST00000245479 MBD3L3A6NE82 208 aaPredicted RBP9.24□□□□□ -0.93
SOX9-201ENST00000245479 MBD3L5A6NJ08 208 aaPredicted RBP9.24□□□□□ -0.93
SOX9-201ENST00000245479 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.24□□□□□ -0.93
SOX9-201ENST00000245479 Q6ZS92 163 aa9.24□□□□□ -0.93
SOX9-201ENST00000245479 MBD3L2Q8NHZ7 208 aaPredicted RBP9.24□□□□□ -0.93
SOX9-201ENST00000245479 NXT2Q9NPJ8 142 aaKnown RBP9.24□□□□□ -0.93
SOX9-201ENST00000245479 ADAMTS20P59510 1910 aa9.23□□□□□ -0.93
SOX9-201ENST00000245479 E7EQL1 145 aa9.23□□□□□ -0.93
SOX9-201ENST00000245479 WT1-ASQ06250 92 aa9.23□□□□□ -0.93
SOX9-201ENST00000245479 SH2D6Q7Z4S9 175 aa9.23□□□□□ -0.93
SOX9-201ENST00000245479 C1orf162Q8NEQ5 155 aaPredicted RBP9.23□□□□□ -0.93
SOX9-201ENST00000245479 C8orf46Q8TAG6 207 aa9.23□□□□□ -0.93
SOX9-201ENST00000245479 TMEM213A2RRL7 107 aa9.23□□□□□ -0.93
SOX9-201ENST00000245479 Q86TA4 180 aa9.23□□□□□ -0.93
SOX9-201ENST00000245479 SCGB3A1Q96QR1 104 aa9.23□□□□□ -0.93
SOX9-201ENST00000245479 CT83Q5H943 113 aa9.23□□□□□ -0.93
SOX9-201ENST00000245479 TMEM78Q5T7P6 136 aa9.23□□□□□ -0.93
SOX9-201ENST00000245479 GFRA4Q9GZZ7 299 aa9.23□□□□□ -0.93
SOX9-201ENST00000245479 PRSS2P07478 247 aa9.22□□□□□ -0.93
SOX9-201ENST00000245479 MRAP2Q96G30 205 aa9.22□□□□□ -0.93
SOX9-201ENST00000245479 CTSZQ9UBR2 303 aa9.22□□□□□ -0.93
SOX9-201ENST00000245479 CRYBG3Q68DQ2 2970 aa9.22□□□□□ -0.93
SOX9-201ENST00000245479 EMP1P54849 157 aa9.22□□□□□ -0.93
SOX9-201ENST00000245479 LGALS9BQ3B8N2 356 aa9.22□□□□□ -0.93
SOX9-201ENST00000245479 LGALS9CQ6DKI2 356 aa9.22□□□□□ -0.93
SOX9-201ENST00000245479 SPATA12Q7Z6I5 190 aa9.22□□□□□ -0.93
SOX9-201ENST00000245479 SYT8Q8NBV8 401 aa9.22□□□□□ -0.93
SOX9-201ENST00000245479 IGLV1-44P01699 117 aa9.22□□□□□ -0.93
SOX9-201ENST00000245479 TMEM30BQ3MIR4 351 aa9.22□□□□□ -0.93
SOX9-201ENST00000245479 ZFAND6Q6FIF0 208 aa9.22□□□□□ -0.93
SOX9-201ENST00000245479 PGPEP1Q9NXJ5 209 aa9.22□□□□□ -0.93
SOX9-201ENST00000245479 F8W1H4 67 aa9.21□□□□□ -0.93
SOX9-201ENST00000245479 TIMM23O14925 209 aa9.21□□□□□ -0.93
SOX9-201ENST00000245479 LINC01545Q5VT33 79 aa9.21□□□□□ -0.93
SOX9-201ENST00000245479 ZNF492Q9P255 531 aa9.21□□□□□ -0.93
SOX9-201ENST00000245479 A8MWV9 139 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 Q8N976 141 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 TIMD4Q96H15 378 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 SIGLEC8Q9NYZ4 499 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 COL4A2P08572 1712 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 FASNP49327 2511 aaKnown RBP9.21□□□□□ -0.94
SOX9-201ENST00000245479 TMEM178BH3BS89 294 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 PRTN3P24158 256 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 TCF15Q12870 199 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 GAGE2BQ13066 116 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 GAGE2EQ4V326 116 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 TMEM170BQ5T4T1 132 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 C16orf54Q6UWD8 224 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 IGF2BP2-AS1Q96M15 143 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 SLC25A39Q9BZJ4 359 aaPredicted RBP9.21□□□□□ -0.94
SOX9-201ENST00000245479 GAGE2DQ9UEU5 116 aa9.21□□□□□ -0.94
SOX9-201ENST00000245479 FN1P02751 2386 aaKnown RBP9.2□□□□□ -0.94
SOX9-201ENST00000245479 A0A1W2PPI3 338 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 LY6EQ16553 131 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 TMEM158Q8WZ71 300 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 DLX4Q92988 240 aaPredicted RBP9.2□□□□□ -0.94
SOX9-201ENST00000245479 C1RLQ9NZP8 487 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 DKK2Q9UBU2 259 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 LINC00312Q9Y6C7 94 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 TRAV40A0A0B4J280 105 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 ZNF815PA8K554 130 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 MFAP4P55083 255 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 WFDC2Q14508 124 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 GDF5OSQ5U4N7 250 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 FXYD5Q96DB9 178 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 ZNF48Q96MX3 618 aaPredicted RBP9.2□□□□□ -0.94
SOX9-201ENST00000245479 F2RL2O00254 374 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 PIP4P1Q86T03 277 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 JMJD8Q96S16 334 aa9.2□□□□□ -0.94
SOX9-201ENST00000245479 K7EMI3 77 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 M0R381 172 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 HAX1O00165 279 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 RNF125Q96EQ8 232 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 C17orf77Q96MU5 243 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 TET2Q6N021 2002 aaPredicted RBP9.19□□□□□ -0.94
SOX9-201ENST00000245479 IGLV3-9A0A075B6K5 115 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 RUSC1-AS1Q66K80 236 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 PRSS33Q8NF86 280 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 TTTY13Q9BZ97 58 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 VCX2Q9H322 139 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 SMPXQ9UHP9 88 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 ZNF256Q9Y2P7 627 aaPredicted RBP9.19□□□□□ -0.94
SOX9-201ENST00000245479 CELSR1Q9NYQ6 3014 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 TRAV26-1A0A087WT03 109 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 IGKV2-40A0A087WW87 121 aaPredicted RBP9.19□□□□□ -0.94
SOX9-201ENST00000245479 FABP5P3A8MUU1 101 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 NPIPB6E9PJ23 425 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 TMEM262E9PQX1 116 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 IGKV2D-40P01614 121 aaPredicted RBP9.19□□□□□ -0.94
SOX9-201ENST00000245479 CEACAM3P40198 252 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 DLX6P56179 175 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 SP5Q6BEB4 398 aaPredicted RBP9.19□□□□□ -0.94
SOX9-201ENST00000245479 TMEM219Q86XT9 240 aa9.19□□□□□ -0.94
SOX9-201ENST00000245479 TMEM8BA6NDV4 472 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms