RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 SIRPDQ9H106 197 aa7.09□□□□□ -1.27
SYDE2-201ENST00000234668 A0A087X0K7 114 aa7.09□□□□□ -1.28
SYDE2-201ENST00000234668 NUDT3O95989 172 aa7.09□□□□□ -1.28
SYDE2-201ENST00000234668 RPL7P18124 248 aaKnown RBP7.09□□□□□ -1.28
SYDE2-201ENST00000234668 LY6EQ16553 131 aa7.09□□□□□ -1.28
SYDE2-201ENST00000234668 FAM162BQ5T6X4 162 aa7.09□□□□□ -1.28
SYDE2-201ENST00000234668 C16orf54Q6UWD8 224 aa7.09□□□□□ -1.28
SYDE2-201ENST00000234668 CHCHD1Q96BP2 118 aaKnown RBP7.09□□□□□ -1.28
SYDE2-201ENST00000234668 C18orf15Q96N68 181 aa7.09□□□□□ -1.28
SYDE2-201ENST00000234668 SRSF8Q9BRL6 282 aaKnown RBP7.09□□□□□ -1.28
SYDE2-201ENST00000234668 SIGLEC8Q9NYZ4 499 aa7.09□□□□□ -1.28
SYDE2-201ENST00000234668 LRRK2Q5S007 2527 aa7.09□□□□□ -1.28
SYDE2-201ENST00000234668 GNLYP22749 145 aa7.08□□□□□ -1.28
SYDE2-201ENST00000234668 NHLH1Q02575 133 aa7.08□□□□□ -1.28
SYDE2-201ENST00000234668 IL17RELQ6ZVW7 336 aa7.08□□□□□ -1.28
SYDE2-201ENST00000234668 ZNF575Q86XF7 245 aa7.08□□□□□ -1.28
SYDE2-201ENST00000234668 PRELID3AQ96N28 172 aa7.08□□□□□ -1.28
SYDE2-201ENST00000234668 IGSF10Q6WRI0 2623 aa7.08□□□□□ -1.28
SYDE2-201ENST00000234668 ABCA12Q86UK0 2595 aa7.08□□□□□ -1.28
SYDE2-201ENST00000234668 MRPL51Q4U2R6 128 aaKnown RBP7.08□□□□□ -1.28
SYDE2-201ENST00000234668 LYPD1Q8N2G4 141 aa7.08□□□□□ -1.28
SYDE2-201ENST00000234668 RNF24Q9Y225 148 aa7.08□□□□□ -1.28
SYDE2-201ENST00000234668 FAM231BA6NCW3 169 aa7.07□□□□□ -1.28
SYDE2-201ENST00000234668 NPYP01303 97 aa7.07□□□□□ -1.28
SYDE2-201ENST00000234668 CKS2P33552 79 aa7.07□□□□□ -1.28
SYDE2-201ENST00000234668 LMO4P61968 165 aa7.07□□□□□ -1.28
SYDE2-201ENST00000234668 A0A096LNJ9 63 aa7.07□□□□□ -1.28
SYDE2-201ENST00000234668 IGHV2-70DA0A0C4DH43 119 aa7.07□□□□□ -1.28
SYDE2-201ENST00000234668 IGF1P05019 195 aa7.07□□□□□ -1.28
SYDE2-201ENST00000234668 PRSS57Q6UWY2 283 aa7.07□□□□□ -1.28
SYDE2-201ENST00000234668 CCDC140Q96MF4 163 aa7.07□□□□□ -1.28
SYDE2-201ENST00000234668 CBY3A6NI87 242 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 TRBV12-3P01733 135 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 IGHV3-11P01762 117 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 FAM104BQ5XKR9 115 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 DTX2Q86UW9 622 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 FER1L6-AS1Q8NA97 138 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 DEFB104AQ8WTQ1 72 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 ZNF747Q9BV97 191 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 TMEM191AQ9H0A3 160 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 SETD2Q9BYW2 2564 aaPredicted RBP7.06□□□□□ -1.28
SYDE2-201ENST00000234668 PTPN13Q12923 2485 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 CENPVL3A0A0U1RRI6 287 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 HSBP1L1C9JCN9 74 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 CCL25O15444 150 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 PSG9Q00887 426 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 ZNF502Q8TBZ5 544 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 C11orf21Q9P2W6 132 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 C20orf202A1L168 122 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 BUB3O43684 328 aa7.06□□□□□ -1.28
SYDE2-201ENST00000234668 NOTCH3Q9UM47 2321 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 TRAV26-2A0A0B4J265 109 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 CLPSL1A2RUU4 121 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 UBE2E1P51965 193 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 EFNA4P52798 201 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 PTTG1IPP53801 180 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 CACNG7P62955 275 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 PDE6HQ13956 83 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 EBI3Q14213 229 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 MINOS1Q5TGZ0 78 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 SLC25A34Q6PIV7 304 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 AGPAT4-IT1Q9H0P7 198 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 HSPB8Q9UJY1 196 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 MINOS1-NBL1R4GNA1 71 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 NPFFO15130 113 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 CRXO43186 299 aaPredicted RBP7.05□□□□□ -1.28
SYDE2-201ENST00000234668 SRD5A1P18405 259 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 UCNP55089 124 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 Q6ZS46 218 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 ORMDL3Q8N138 153 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 OR10AG1Q8NH19 301 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 WFDC12Q8WWY7 111 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 NRGNQ92686 78 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 ZFAND3Q9H8U3 227 aa7.05□□□□□ -1.28
SYDE2-201ENST00000234668 MRPS16Q9Y3D3 137 aaKnown RBP7.05□□□□□ -1.28
SYDE2-201ENST00000234668 TRAV40A0A0B4J280 105 aa7.04□□□□□ -1.28
SYDE2-201ENST00000234668 RPL11P62913 178 aaKnown RBP7.04□□□□□ -1.28
SYDE2-201ENST00000234668 ANKRD39Q53RE8 183 aa7.04□□□□□ -1.28
SYDE2-201ENST00000234668 SAPCD1Q5SSQ6 148 aa7.04□□□□□ -1.28
SYDE2-201ENST00000234668 GLMPQ8WWB7 406 aa7.04□□□□□ -1.28
SYDE2-201ENST00000234668 NAA38Q9BRA0 125 aaKnown RBP7.04□□□□□ -1.28
SYDE2-201ENST00000234668 MYO9AB2RTY4 2548 aa7.04□□□□□ -1.28
SYDE2-201ENST00000234668 TRBV6-1A0A0K0K1D8 114 aa7.04□□□□□ -1.28
SYDE2-201ENST00000234668 GOSR1O95249 250 aa7.04□□□□□ -1.28
SYDE2-201ENST00000234668 TRGV3P03979 118 aa7.04□□□□□ -1.28
SYDE2-201ENST00000234668 UNQ9165/PRO28630Q6UXU0 137 aa7.04□□□□□ -1.28
SYDE2-201ENST00000234668 C1orf122Q6ZSJ8 110 aa7.04□□□□□ -1.28
SYDE2-201ENST00000234668 FAM110DQ8TAY7 271 aaPredicted RBP7.04□□□□□ -1.28
SYDE2-201ENST00000234668 ITLN2Q8WWU7 325 aaPredicted RBP7.04□□□□□ -1.28
SYDE2-201ENST00000234668 IGKV3D-20A0A0C4DH25 116 aa7.03□□□□□ -1.28
SYDE2-201ENST00000234668 IGHV4-61A0A0C4DH41 118 aa7.03□□□□□ -1.28
SYDE2-201ENST00000234668 IGHV4-39P01824 125 aa7.03□□□□□ -1.28
SYDE2-201ENST00000234668 IGHV4-38-2P0DP08 117 aa7.03□□□□□ -1.28
SYDE2-201ENST00000234668 VAMP3Q15836 100 aa7.03□□□□□ -1.28
SYDE2-201ENST00000234668 PET117Q6UWS5 81 aa7.03□□□□□ -1.28
SYDE2-201ENST00000234668 TTTY13Q9BZ97 58 aa7.03□□□□□ -1.28
SYDE2-201ENST00000234668 DKK2Q9UBU2 259 aa7.03□□□□□ -1.28
SYDE2-201ENST00000234668 SONP18583 2426 aaKnown RBP7.03□□□□□ -1.28
SYDE2-201ENST00000234668 FABP5P3A8MUU1 101 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms