RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 SELENOTP62341 195 aa10.7□□□□□ -0.7
UPK3A-201ENST00000216211 RHOBP62745 196 aa10.7□□□□□ -0.7
UPK3A-201ENST00000216211 ICAM4Q14773 271 aa10.7□□□□□ -0.7
UPK3A-201ENST00000216211 FAM222AQ5U5X8 452 aa10.7□□□□□ -0.7
UPK3A-201ENST00000216211 SPATA31B1PQ5VZV4 182 aa10.7□□□□□ -0.7
UPK3A-201ENST00000216211 C1orf158Q8N1D5 194 aa10.7□□□□□ -0.7
UPK3A-201ENST00000216211 C17orf77Q96MU5 243 aa10.7□□□□□ -0.7
UPK3A-201ENST00000216211 DKK2Q9UBU2 259 aa10.7□□□□□ -0.7
UPK3A-201ENST00000216211 PCLOQ9Y6V0 5065 aa10.69□□□□□ -0.7
UPK3A-201ENST00000216211 ZNF98A6NK75 572 aa10.69□□□□□ -0.7
UPK3A-201ENST00000216211 M0R2N4 97 aa10.69□□□□□ -0.7
UPK3A-201ENST00000216211 APOC3P02656 99 aa10.69□□□□□ -0.7
UPK3A-201ENST00000216211 STAG3L2P0CL84 134 aa10.69□□□□□ -0.7
UPK3A-201ENST00000216211 STAG3L3P0CL85 134 aa10.69□□□□□ -0.7
UPK3A-201ENST00000216211 BCL2P10415 239 aa10.69□□□□□ -0.7
UPK3A-201ENST00000216211 ORM2P19652 201 aa10.69□□□□□ -0.7
UPK3A-201ENST00000216211 GALR1P47211 349 aa10.69□□□□□ -0.7
UPK3A-201ENST00000216211 MEOX2P50222 304 aa10.69□□□□□ -0.7
UPK3A-201ENST00000216211 PPT1P50897 306 aa10.69□□□□□ -0.7
UPK3A-201ENST00000216211 GNG13Q9P2W3 67 aa10.69□□□□□ -0.7
UPK3A-201ENST00000216211 GOLT1BQ9Y3E0 138 aa10.69□□□□□ -0.7
UPK3A-201ENST00000216211 SRP19P09132 144 aaKnown RBP10.68□□□□□ -0.7
UPK3A-201ENST00000216211 SAMD13Q5VXD3 122 aa10.68□□□□□ -0.7
UPK3A-201ENST00000216211 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.68□□□□□ -0.7
UPK3A-201ENST00000216211 LINC00336Q6ZUF6 198 aa10.68□□□□□ -0.7
UPK3A-201ENST00000216211 OR1B1Q8NGR6 318 aa10.68□□□□□ -0.7
UPK3A-201ENST00000216211 NIPSNAP3BQ9BS92 247 aa10.68□□□□□ -0.7
UPK3A-201ENST00000216211 MANBALQ9NQG1 85 aa10.68□□□□□ -0.7
UPK3A-201ENST00000216211 DOK5Q9P104 306 aa10.68□□□□□ -0.7
UPK3A-201ENST00000216211 VAX2Q9UIW0 290 aa10.68□□□□□ -0.7
UPK3A-201ENST00000216211 RYR1P21817 5038 aa10.68□□□□□ -0.7
UPK3A-201ENST00000216211 TEX48A0A1B0GUV7 120 aa10.67□□□□□ -0.7
UPK3A-201ENST00000216211 HMGB3O15347 200 aaKnown RBP10.67□□□□□ -0.7
UPK3A-201ENST00000216211 CXorf1O96002 111 aa10.67□□□□□ -0.7
UPK3A-201ENST00000216211 OR5G3P0C626 314 aa10.67□□□□□ -0.7
UPK3A-201ENST00000216211 IGFL4Q6B9Z1 124 aa10.67□□□□□ -0.7
UPK3A-201ENST00000216211 SVBPQ8N300 66 aa10.67□□□□□ -0.7
UPK3A-201ENST00000216211 OR1L4Q8NGR5 311 aa10.67□□□□□ -0.7
UPK3A-201ENST00000216211 RXFP4Q8TDU9 374 aa10.67□□□□□ -0.7
UPK3A-201ENST00000216211 FUT9Q9Y231 359 aa10.67□□□□□ -0.7
UPK3A-201ENST00000216211 YTHDF2Q9Y5A9 579 aaKnown RBP10.67□□□□□ -0.7
UPK3A-201ENST00000216211 NACAE9PAV3 2078 aa10.67□□□□□ -0.7
UPK3A-201ENST00000216211 A8MTW9 85 aa10.66□□□□□ -0.7
UPK3A-201ENST00000216211 EIF3GO75821 320 aaKnown RBP eCLIP10.66□□□□□ -0.7
UPK3A-201ENST00000216211 HTN3P15516 51 aa10.66□□□□□ -0.7
UPK3A-201ENST00000216211 RRN3P1Q2M238 152 aa10.66□□□□□ -0.7
UPK3A-201ENST00000216211 AMTNQ6UX39 209 aa10.66□□□□□ -0.7
UPK3A-201ENST00000216211 PFDN5Q99471 154 aa10.66□□□□□ -0.7
UPK3A-201ENST00000216211 MRPL32Q9BYC8 188 aaKnown RBP10.66□□□□□ -0.7
UPK3A-201ENST00000216211 TMPRSS5Q9H3S3 457 aa10.66□□□□□ -0.7
UPK3A-201ENST00000216211 DNAJC4Q9NNZ3 241 aa10.66□□□□□ -0.7
UPK3A-201ENST00000216211 DYNC1H1Q14204 4646 aaKnown RBP10.65□□□□□ -0.7
UPK3A-201ENST00000216211 A0A1B0GVY2 172 aa10.65□□□□□ -0.7
UPK3A-201ENST00000216211 H3BRN7 92 aa10.65□□□□□ -0.7
UPK3A-201ENST00000216211 PLP1P60201 277 aa10.65□□□□□ -0.7
UPK3A-201ENST00000216211 UBE2DNLQ8IWF7 75 aa10.65□□□□□ -0.7
UPK3A-201ENST00000216211 RNF182Q8N6D2 247 aa10.65□□□□□ -0.7
UPK3A-201ENST00000216211 TMEM37Q8WXS4 190 aa10.65□□□□□ -0.7
UPK3A-201ENST00000216211 FAM210BQ96KR6 192 aa10.65□□□□□ -0.7
UPK3A-201ENST00000216211 IGF2BP2-AS1Q96M15 143 aa10.65□□□□□ -0.7
UPK3A-201ENST00000216211 GPR82Q96P67 336 aa10.65□□□□□ -0.7
UPK3A-201ENST00000216211 TMEM208Q9BTX3 173 aa10.65□□□□□ -0.7
UPK3A-201ENST00000216211 TRAV8-2A0A0B4J237 113 aa10.64□□□□□ -0.71
UPK3A-201ENST00000216211 M0R2Z0 102 aa10.64□□□□□ -0.71
UPK3A-201ENST00000216211 RTL8CO15255 209 aa10.64□□□□□ -0.71
UPK3A-201ENST00000216211 SNAPINO95295 136 aa10.64□□□□□ -0.71
UPK3A-201ENST00000216211 PRM2P04554 102 aa10.64□□□□□ -0.71
UPK3A-201ENST00000216211 ARL14EPLP0DKL9 152 aa10.64□□□□□ -0.71
UPK3A-201ENST00000216211 GCHFRP30047 84 aa10.64□□□□□ -0.71
UPK3A-201ENST00000216211 CNN1P51911 297 aaKnown RBP10.64□□□□□ -0.71
UPK3A-201ENST00000216211 TAS2R45P59539 299 aa10.64□□□□□ -0.71
UPK3A-201ENST00000216211 SPINK13Q1W4C9 94 aa10.64□□□□□ -0.71
UPK3A-201ENST00000216211 SOHLH1Q5JUK2 328 aa10.64□□□□□ -0.71
UPK3A-201ENST00000216211 PATE2Q6UY27 113 aa10.64□□□□□ -0.71
UPK3A-201ENST00000216211 MIR17HGQ75NE6 70 aa10.64□□□□□ -0.71
UPK3A-201ENST00000216211 SLC25A39Q9BZJ4 359 aaPredicted RBP10.64□□□□□ -0.71
UPK3A-201ENST00000216211 IGLV2-18A0A075B6J9 118 aa10.63□□□□□ -0.71
UPK3A-201ENST00000216211 PRSS29PA6NIE9 313 aa10.63□□□□□ -0.71
UPK3A-201ENST00000216211 COX7A2P2O60397 106 aa10.63□□□□□ -0.71
UPK3A-201ENST00000216211 DUSP14O95147 198 aaKnown RBP10.63□□□□□ -0.71
UPK3A-201ENST00000216211 S100A7P31151 101 aa10.63□□□□□ -0.71
UPK3A-201ENST00000216211 DAD1P61803 113 aa10.63□□□□□ -0.71
UPK3A-201ENST00000216211 MEF2BQ02080 365 aaPredicted RBP10.63□□□□□ -0.71
UPK3A-201ENST00000216211 LGALS9BQ3B8N2 356 aa10.63□□□□□ -0.71
UPK3A-201ENST00000216211 C10orf113Q5VZT2 155 aa10.63□□□□□ -0.71
UPK3A-201ENST00000216211 ATRAIDQ6UW56 229 aa10.63□□□□□ -0.71
UPK3A-201ENST00000216211 PQLC2Q6ZP29 291 aa10.63□□□□□ -0.71
UPK3A-201ENST00000216211 SUN5Q8TC36 379 aa10.63□□□□□ -0.71
UPK3A-201ENST00000216211 TXNDC17Q9BRA2 123 aa10.63□□□□□ -0.71
UPK3A-201ENST00000216211 HIGD1AQ9Y241 93 aa10.63□□□□□ -0.71
UPK3A-201ENST00000216211 ZNF705GA8MUZ8 300 aaPredicted RBP10.62□□□□□ -0.71
UPK3A-201ENST00000216211 CRXO43186 299 aaPredicted RBP10.62□□□□□ -0.71
UPK3A-201ENST00000216211 PAGE4O60829 102 aa10.62□□□□□ -0.71
UPK3A-201ENST00000216211 SCO1O75880 301 aa10.62□□□□□ -0.71
UPK3A-201ENST00000216211 INSP01308 110 aa10.62□□□□□ -0.71
UPK3A-201ENST00000216211 TMEM88Q6PEY1 159 aa10.62□□□□□ -0.71
UPK3A-201ENST00000216211 IQCF2Q8IXL9 164 aa10.62□□□□□ -0.71
UPK3A-201ENST00000216211 CYB561D1Q8N8Q1 229 aa10.62□□□□□ -0.71
UPK3A-201ENST00000216211 ZNF738Q8NE65 137 aa10.62□□□□□ -0.71
UPK3A-201ENST00000216211 SHANK2-AS3Q9BTD1 123 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 202.5 ms