RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 SPRY2O43597 315 aa13.51□□□□□ -0.25
PTPN18-201ENST00000175756 TEX22C9J3V5 150 aa13.51□□□□□ -0.25
PTPN18-201ENST00000175756 I3L2K1 104 aa13.51□□□□□ -0.25
PTPN18-201ENST00000175756 K7EIM0 57 aa13.51□□□□□ -0.25
PTPN18-201ENST00000175756 LCNL1Q6ZST4 164 aa13.51□□□□□ -0.25
PTPN18-201ENST00000175756 JKAMPQ9P055 326 aa13.51□□□□□ -0.25
PTPN18-201ENST00000175756 SMAD7O15105 426 aaKnown RBP13.51□□□□□ -0.25
PTPN18-201ENST00000175756 EGR2P11161 476 aaPredicted RBP13.51□□□□□ -0.25
PTPN18-201ENST00000175756 FAM71F2Q6NXP2 309 aa13.51□□□□□ -0.25
PTPN18-201ENST00000175756 CRYGCP07315 174 aa13.5□□□□□ -0.25
PTPN18-201ENST00000175756 CDKN1BP46527 198 aa13.5□□□□□ -0.25
PTPN18-201ENST00000175756 SCGB1D4Q6XE38 83 aa13.5□□□□□ -0.25
PTPN18-201ENST00000175756 C7orf69Q9H7B7 122 aa13.5□□□□□ -0.25
PTPN18-201ENST00000175756 LINC00574Q9H8X3 128 aa13.5□□□□□ -0.25
PTPN18-201ENST00000175756 C1RLQ9NZP8 487 aa13.5□□□□□ -0.25
PTPN18-201ENST00000175756 LINC01545Q5VT33 79 aa13.5□□□□□ -0.25
PTPN18-201ENST00000175756 K7EP13 123 aa13.5□□□□□ -0.25
PTPN18-201ENST00000175756 FCN3O75636 299 aa13.5□□□□□ -0.25
PTPN18-201ENST00000175756 GRNP28799 593 aaKnown RBP13.5□□□□□ -0.25
PTPN18-201ENST00000175756 HSD52Q0P140 79 aa13.5□□□□□ -0.25
PTPN18-201ENST00000175756 C5orf64Q2M2E5 130 aa13.5□□□□□ -0.25
PTPN18-201ENST00000175756 ZC2HC1BQ5TFG8 222 aa13.5□□□□□ -0.25
PTPN18-201ENST00000175756 K7ERJ3 54 aa13.49□□□□□ -0.25
PTPN18-201ENST00000175756 TMEM158Q8WZ71 300 aa13.49□□□□□ -0.25
PTPN18-201ENST00000175756 TNFRSF14Q92956 283 aa13.49□□□□□ -0.25
PTPN18-201ENST00000175756 C16orf92Q96LL3 132 aa13.49□□□□□ -0.25
PTPN18-201ENST00000175756 LAMA5O15230 3695 aa13.49□□□□□ -0.25
PTPN18-201ENST00000175756 H3BRN7 92 aa13.49□□□□□ -0.25
PTPN18-201ENST00000175756 NDPQ00604 133 aa13.49□□□□□ -0.25
PTPN18-201ENST00000175756 TRAV26-2A0A0B4J265 109 aa13.49□□□□□ -0.25
PTPN18-201ENST00000175756 F5H697 171 aa13.49□□□□□ -0.25
PTPN18-201ENST00000175756 DLX6P56179 175 aa13.49□□□□□ -0.25
PTPN18-201ENST00000175756 SAMD5Q5TGI4 173 aa13.49□□□□□ -0.25
PTPN18-201ENST00000175756 ZNF502Q8TBZ5 544 aa13.49□□□□□ -0.25
PTPN18-201ENST00000175756 PRR25Q96S07 402 aa13.49□□□□□ -0.25
PTPN18-201ENST00000175756 TLN2Q9Y4G6 2542 aa13.48□□□□□ -0.25
PTPN18-201ENST00000175756 CRIP1P50238 77 aa13.48□□□□□ -0.25
PTPN18-201ENST00000175756 RPS20P60866 119 aaKnown RBP13.48□□□□□ -0.25
PTPN18-201ENST00000175756 TMEM14CQ9P0S9 112 aa13.48□□□□□ -0.25
PTPN18-201ENST00000175756 C2CD3Q4AC94 2353 aa13.48□□□□□ -0.25
PTPN18-201ENST00000175756 C15orf32Q32M92 178 aa13.48□□□□□ -0.25
PTPN18-201ENST00000175756 GLMPQ8WWB7 406 aa13.48□□□□□ -0.25
PTPN18-201ENST00000175756 UBTD1Q9HAC8 227 aa13.48□□□□□ -0.25
PTPN18-201ENST00000175756 CCDC144NLQ6NUI1 221 aa13.48□□□□□ -0.25
PTPN18-201ENST00000175756 CCDC168Q8NDH2 2452 aa13.47□□□□□ -0.25
PTPN18-201ENST00000175756 SETD2Q9BYW2 2564 aaPredicted RBP13.47□□□□□ -0.25
PTPN18-201ENST00000175756 SRSF9Q13242 221 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTPN18-201ENST00000175756 RAI1Q7Z5J4 1906 aaPredicted RBP13.47□□□□□ -0.25
PTPN18-201ENST00000175756 NDUFS7O75251 213 aa13.46□□□□□ -0.25
PTPN18-201ENST00000175756 CENPEQ02224 2701 aa13.46□□□□□ -0.25
PTPN18-201ENST00000175756 TRAV40A0A0B4J280 105 aa13.46□□□□□ -0.26
PTPN18-201ENST00000175756 SHISA9B4DS77 424 aa13.46□□□□□ -0.26
PTPN18-201ENST00000175756 INS-IGF2F8WCM5 200 aa13.46□□□□□ -0.26
PTPN18-201ENST00000175756 IGLV1-47P01700 117 aa13.46□□□□□ -0.26
PTPN18-201ENST00000175756 FOXE3Q13461 319 aa13.46□□□□□ -0.26
PTPN18-201ENST00000175756 OR4X2Q8NGF9 303 aa13.46□□□□□ -0.26
PTPN18-201ENST00000175756 TNFRSF6BO95407 300 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 IGLV2-11P01706 119 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 C3orf36Q3SXR2 165 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 PIP4P1Q86T03 277 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 LOC107984156A0A0G2JMH3 177 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 FSTL3O95633 263 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 IGFL3Q6UXB1 125 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 ARL17AQ8IVW1 177 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 LYPD1Q8N2G4 141 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 WFDC12Q8WWY7 111 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 C9orf118A6NHY6 69 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 H3BVH4 76 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 IGKCP01834 107 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 IL17RELQ6ZVW7 336 aa13.45□□□□□ -0.26
PTPN18-201ENST00000175756 OR9G4Q8NGQ1 327 aa13.44□□□□□ -0.26
PTPN18-201ENST00000175756 J3QR89 54 aa13.44□□□□□ -0.26
PTPN18-201ENST00000175756 KAAG1Q9UBP8 84 aa13.44□□□□□ -0.26
PTPN18-201ENST00000175756 METTL26Q96S19 204 aa13.43□□□□□ -0.26
PTPN18-201ENST00000175756 TMEM8BA6NDV4 472 aa13.43□□□□□ -0.26
PTPN18-201ENST00000175756 CRXO43186 299 aaPredicted RBP13.43□□□□□ -0.26
PTPN18-201ENST00000175756 DPM2O94777 84 aa13.43□□□□□ -0.26
PTPN18-201ENST00000175756 ZNF80P51504 273 aaPredicted RBP13.43□□□□□ -0.26
PTPN18-201ENST00000175756 TMEM219Q86XT9 240 aa13.43□□□□□ -0.26
PTPN18-201ENST00000175756 G3V318 75 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 TGFAP01135 160 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 SMIM17P0DL12 118 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 SMAGPQ0VAQ4 97 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 LGALS9BQ3B8N2 356 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 LGALS9CQ6DKI2 356 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 VMO1Q7Z5L0 202 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 OR1N2Q8NGR9 330 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 GTSF1LQ9H1H1 148 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 USP9YO00507 2555 aaPredicted RBP13.42□□□□□ -0.26
PTPN18-201ENST00000175756 DYNAPQ8N1N2 210 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 ARL6IP6Q8N6S5 226 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 PRAC2D3DTV9 90 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 EFNA4P52798 201 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 CHAC1Q9BUX1 264 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 NXT2Q9NPJ8 142 aaKnown RBP13.42□□□□□ -0.26
PTPN18-201ENST00000175756 PHLDA3Q9Y5J5 127 aa13.42□□□□□ -0.26
PTPN18-201ENST00000175756 COL12A1Q99715 3063 aa13.41□□□□□ -0.26
PTPN18-201ENST00000175756 H3BRM9 83 aa13.41□□□□□ -0.26
PTPN18-201ENST00000175756 IGHV3-11P01762 117 aa13.41□□□□□ -0.26
PTPN18-201ENST00000175756 CEACAM4O75871 244 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms