RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 HRNRQ86YZ3 2850 aaPredicted RBP9.49□□□□□ -0.89
RBFOX1-224ENST00000641259 HBDP02042 147 aa9.49□□□□□ -0.89
RBFOX1-224ENST00000641259 ABCA4P78363 2273 aa9.49□□□□□ -0.89
RBFOX1-224ENST00000641259 TRAV40A0A0B4J280 105 aa9.49□□□□□ -0.89
RBFOX1-224ENST00000641259 KLF5Q13887 457 aaPredicted RBP9.49□□□□□ -0.89
RBFOX1-224ENST00000641259 C2CD3Q4AC94 2353 aa9.48□□□□□ -0.89
RBFOX1-224ENST00000641259 IGLL5B9A064 214 aa9.48□□□□□ -0.89
RBFOX1-224ENST00000641259 C2orf83Q53S99 150 aa9.48□□□□□ -0.89
RBFOX1-224ENST00000641259 VKORC1Q9BQB6 163 aa9.48□□□□□ -0.89
RBFOX1-224ENST00000641259 COL6A6A6NMZ7 2263 aa9.48□□□□□ -0.89
RBFOX1-224ENST00000641259 TCRBV4S1A1TA0A5B7 111 aa9.48□□□□□ -0.89
RBFOX1-224ENST00000641259 NCBP2LA6PVI3 153 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-224ENST00000641259 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-224ENST00000641259 BRWD1-AS2P59051 145 aa9.48□□□□□ -0.89
RBFOX1-224ENST00000641259 PLGLAQ15195 96 aa9.48□□□□□ -0.89
RBFOX1-224ENST00000641259 HARBI1Q96MB7 349 aa9.48□□□□□ -0.89
RBFOX1-224ENST00000641259 IGHV3OR16-8A0A075B7F1 116 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 THBDP07204 575 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 XGP55808 180 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 FAM120AOSQ5T036 256 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 Q6ZS49 121 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 IGKV1OR2-108A0A075B7D4 117 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 IGKV2D-26A0A0A0MRZ7 120 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 FOXI2Q6ZQN5 318 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 ZNF329Q86UD4 541 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 Q8N7P7 452 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 ZNF503Q96F45 646 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 Q9H3A6 140 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 SIGLEC8Q9NYZ4 499 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 LINC01549A6NIU2 74 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 Q8IYB0 196 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 MBD6Q96DN6 1003 aa9.47□□□□□ -0.89
RBFOX1-224ENST00000641259 TRBV25-1A0A075B6N4 114 aa9.46□□□□□ -0.89
RBFOX1-224ENST00000641259 CACNA1AO00555 2505 aa9.46□□□□□ -0.89
RBFOX1-224ENST00000641259 HOXA3O43365 443 aaPredicted RBP9.46□□□□□ -0.89
RBFOX1-224ENST00000641259 C12orf74Q32Q52 190 aa9.46□□□□□ -0.89
RBFOX1-224ENST00000641259 ATP5L2Q7Z4Y8 100 aa9.46□□□□□ -0.89
RBFOX1-224ENST00000641259 ORMDL3Q8N138 153 aa9.46□□□□□ -0.89
RBFOX1-224ENST00000641259 PIEZO1Q92508 2521 aa9.46□□□□□ -0.9
RBFOX1-224ENST00000641259 IGHV3-35A0A0C4DH35 117 aa9.46□□□□□ -0.9
RBFOX1-224ENST00000641259 CDSNQ15517 529 aa9.46□□□□□ -0.9
RBFOX1-224ENST00000641259 TMEM155Q4W5P6 130 aa9.46□□□□□ -0.9
RBFOX1-224ENST00000641259 CXXC4Q9H2H0 198 aa9.46□□□□□ -0.9
RBFOX1-224ENST00000641259 SLC25A10Q9UBX3 287 aaPredicted RBP9.46□□□□□ -0.9
RBFOX1-224ENST00000641259 GAGE12JA6NER3 117 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 SPRY3O43610 288 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 GAGE7O76087 117 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 GAGE12FP0CL80 117 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 GAGE12GP0CL81 117 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 GAGE12IP0CL82 117 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 GAGE4Q13068 117 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 ZNF146Q15072 292 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 Q6ZUT4 128 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 IGF2BP2-AS1Q96M15 143 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 IFI27L2Q9H2X8 130 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 CGB1A6NKQ9 187 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 OR11H12B2RN74 326 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 CCDC179H3BU77 68 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 IGKCP01834 107 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 UCNP55089 124 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 FOXI1Q12951 378 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 RASL11AQ6T310 242 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 Q71RC1 249 aaPredicted RBP9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 LINC00596Q86U02 117 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 OR11H1Q8NG94 326 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 OR11H2Q8NH07 326 aa9.45□□□□□ -0.9
RBFOX1-224ENST00000641259 VPS13CQ709C8 3753 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 TMEM189A5PLL7 270 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 TMEM8BA6NDV4 472 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 C15orf61A6NNL5 157 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 M0R3E3 92 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 PRDX2P32119 198 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 TCTEX1D4Q5JR98 221 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 MYOZ3Q8TDC0 251 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 DDB2Q92466 427 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 RAX2Q96IS3 184 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 SMPXQ9UHP9 88 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 SVEP1Q4LDE5 3571 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 IGKV1-16P04430 117 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 RPL32P62910 135 aaKnown RBP9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 SLC25A2Q9BXI2 301 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 ASH1LQ9NR48 2969 aaKnown RBP9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 TRGV8A0A0C4DH27 118 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 C16orf97H3BN30 126 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 IGHV4-39P01824 125 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 GRNP28799 593 aaKnown RBP9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 LY6DQ14210 128 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 MEIG1Q5JSS6 88 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 LYZL1Q6UWQ5 148 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 CEND1Q8N111 149 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 Q8TCH9 128 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 ONECUT1Q9UBC0 465 aa9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 RPUSD1Q9UJJ7 312 aaKnown RBP9.44□□□□□ -0.9
RBFOX1-224ENST00000641259 TCRAP04437 139 aa9.43□□□□□ -0.9
RBFOX1-224ENST00000641259 FGF6P10767 208 aa9.43□□□□□ -0.9
RBFOX1-224ENST00000641259 GLRXP35754 106 aa9.43□□□□□ -0.9
RBFOX1-224ENST00000641259 AAMDCQ9H7C9 122 aa9.43□□□□□ -0.9
RBFOX1-224ENST00000641259 PRNDQ9UKY0 176 aa9.43□□□□□ -0.9
RBFOX1-224ENST00000641259 TACC2O95359 2948 aa9.43□□□□□ -0.9
RBFOX1-224ENST00000641259 IGLV3-9A0A075B6K5 115 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms