RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	RPH3AL	Q9UNE2	315 aa		13.26	□□□□□ -0.29
SPIN3-238	ENST00000640421	MGAM2	Q2M2H8	2515 aa		13.26	□□□□□ -0.29
SPIN3-238	ENST00000640421	INSL3	P51460	131 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	C5orf17	Q8NAS9	161 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	TXNDC17	Q9BRA2	123 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	TREM1	Q9NP99	234 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	EPDR1	Q9UM22	224 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	TRAV2	A0A0B4J234	112 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	PEA15	Q15121	130 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	PSG3	Q16557	428 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	LCN12	Q6JVE5	192 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	CYB561D1	Q8N8Q1	229 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	OR2K2	Q8NGT1	345 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	LINC00052	Q96N35	136 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	DERL1	Q9BUN8	251 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	MCRIP2	Q9BUT9	160 aa	Known RBP	13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	NOTCH1	P46531	2555 aa		13.25	□□□□□ -0.29
SPIN3-238	ENST00000640421	LINC00479	Q96M42	142 aa		13.24	□□□□□ -0.29
SPIN3-238	ENST00000640421	CITED4	Q96RK1	184 aa		13.24	□□□□□ -0.29
SPIN3-238	ENST00000640421	WIPF1	O43516	503 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	PDE6D	O43924	150 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	TCRA	P04437	139 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	KRTAP21-3	Q3LHN1	58 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	OXLD1	Q5BKU9	147 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	PSMG4	Q5JS54	123 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	CMTM2	Q8TAZ6	248 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	C11orf52	Q96A22	123 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	OR4C46	A6NHA9	309 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	DIRC3	C9JPN6	131 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421		F6UB75	175 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	PEX7	O00628	323 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	IGKV2D-40	P01614	121 aa	Predicted RBP	13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	CEBPG	P53567	150 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	NDUFA5	Q16718	116 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	SAMD13	Q5VXD3	122 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	UQCC3	Q6UW78	93 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	C2CD4C	Q8TF44	421 aa		13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	RPUSD4	Q96CM3	377 aa	Known RBP	13.23	□□□□□ -0.29
SPIN3-238	ENST00000640421	ID1	P41134	155 aa		13.22	□□□□□ -0.29
SPIN3-238	ENST00000640421	ODF3L2	Q3SX64	289 aa		13.22	□□□□□ -0.29
SPIN3-238	ENST00000640421	PRR31	Q5SQ13	230 aa		13.22	□□□□□ -0.29
SPIN3-238	ENST00000640421	GOLT1A	Q6ZVE7	132 aa		13.22	□□□□□ -0.29
SPIN3-238	ENST00000640421	ZNF738	Q8NE65	137 aa		13.22	□□□□□ -0.29
SPIN3-238	ENST00000640421	MRPL53	Q96EL3	112 aa	Known RBP	13.22	□□□□□ -0.29
SPIN3-238	ENST00000640421	SGK494	Q96LW2	274 aa		13.22	□□□□□ -0.29
SPIN3-238	ENST00000640421	ATG101	Q9BSB4	218 aa		13.22	□□□□□ -0.29
SPIN3-238	ENST00000640421	SLC35B3	Q9H1N7	401 aa		13.22	□□□□□ -0.29
SPIN3-238	ENST00000640421	SMDT1	Q9H4I9	107 aa		13.22	□□□□□ -0.29
SPIN3-238	ENST00000640421	PRELID1	Q9Y255	219 aa		13.22	□□□□□ -0.29
SPIN3-238	ENST00000640421	AGRN	O00468	2067 aa		13.22	□□□□□ -0.29
SPIN3-238	ENST00000640421	TRAV8-1	A0A0A6YYK1	113 aa		13.21	□□□□□ -0.29
SPIN3-238	ENST00000640421		F6UZH7	168 aa		13.21	□□□□□ -0.29
SPIN3-238	ENST00000640421	TMEM250	H0YL14	139 aa		13.21	□□□□□ -0.29
SPIN3-238	ENST00000640421	ZNF705D	P0CH99	300 aa	Predicted RBP	13.21	□□□□□ -0.29
SPIN3-238	ENST00000640421	ZNF705B	P0CI00	300 aa	Predicted RBP	13.21	□□□□□ -0.29
SPIN3-238	ENST00000640421	SNRPD3	P62318	126 aa	Known RBP	13.21	□□□□□ -0.29
SPIN3-238	ENST00000640421	ZNF124	Q15973	351 aa		13.21	□□□□□ -0.29
SPIN3-238	ENST00000640421	BEAN1	Q3B7T3	259 aa		13.21	□□□□□ -0.29
SPIN3-238	ENST00000640421	HIST1H2BA	Q96A08	127 aa		13.21	□□□□□ -0.29
SPIN3-238	ENST00000640421	MAP6D1	Q9H9H5	199 aa		13.21	□□□□□ -0.29
SPIN3-238	ENST00000640421	TRAV34	A0A0B4J273	112 aa		13.21	□□□□□ -0.3
SPIN3-238	ENST00000640421	CD7	P09564	240 aa		13.21	□□□□□ -0.3
SPIN3-238	ENST00000640421	SFTA3	P0C7M3	94 aa		13.21	□□□□□ -0.3
SPIN3-238	ENST00000640421	GDF5OS	Q5U4N7	250 aa		13.21	□□□□□ -0.3
SPIN3-238	ENST00000640421	VGLL1	Q99990	258 aa		13.21	□□□□□ -0.3
SPIN3-238	ENST00000640421	TCEAL7	Q9BRU2	100 aa		13.21	□□□□□ -0.3
SPIN3-238	ENST00000640421	CLEC5A	Q9NY25	188 aa		13.21	□□□□□ -0.3
SPIN3-238	ENST00000640421	IGLV2-11	P01706	119 aa		13.2	□□□□□ -0.3
SPIN3-238	ENST00000640421	ADCYAP1	P18509	176 aa		13.2	□□□□□ -0.3
SPIN3-238	ENST00000640421	CSN1S1	P47710	185 aa		13.2	□□□□□ -0.3
SPIN3-238	ENST00000640421	DEFB131A	P59861	70 aa		13.2	□□□□□ -0.3
SPIN3-238	ENST00000640421	NDUFS6	O75380	124 aa	Known RBP	13.19	□□□□□ -0.3
SPIN3-238	ENST00000640421	ASCL2	Q99929	193 aa		13.19	□□□□□ -0.3
SPIN3-238	ENST00000640421	PARL	Q9H300	379 aa		13.19	□□□□□ -0.3
SPIN3-238	ENST00000640421	TRBV20OR9-2	A0A075B6H5	130 aa		13.19	□□□□□ -0.3
SPIN3-238	ENST00000640421	RPL35	P42766	123 aa	Known RBP	13.19	□□□□□ -0.3
SPIN3-238	ENST00000640421	ERCC8	Q13216	396 aa		13.19	□□□□□ -0.3
SPIN3-238	ENST00000640421	APRG1	Q8IVJ8	170 aa		13.19	□□□□□ -0.3
SPIN3-238	ENST00000640421	ARL6IP6	Q8N6S5	226 aa		13.19	□□□□□ -0.3
SPIN3-238	ENST00000640421	WFDC10A	Q9H1F0	79 aa		13.19	□□□□□ -0.3
SPIN3-238	ENST00000640421	TMEM218	A2RU14	115 aa		13.18	□□□□□ -0.3
SPIN3-238	ENST00000640421	C19orf73	Q9NVV2	129 aa		13.18	□□□□□ -0.3
SPIN3-238	ENST00000640421	KLF12	Q9Y4X4	402 aa		13.18	□□□□□ -0.3
SPIN3-238	ENST00000640421	AKR1C3	P42330	323 aa		13.17	□□□□□ -0.3
SPIN3-238	ENST00000640421	ZNF674	Q2M3X9	581 aa		13.17	□□□□□ -0.3
SPIN3-238	ENST00000640421	OR8A1	Q8NGG7	326 aa		13.17	□□□□□ -0.3
SPIN3-238	ENST00000640421	KNCN	A6PVL3	124 aa		13.16	□□□□□ -0.3
SPIN3-238	ENST00000640421		G3V4G9	280 aa		13.16	□□□□□ -0.3
SPIN3-238	ENST00000640421		Q8TAT8	98 aa		13.16	□□□□□ -0.3
SPIN3-238	ENST00000640421		A0A0J9YX75	114 aa		13.16	□□□□□ -0.3
SPIN3-238	ENST00000640421	CNN1	P51911	297 aa	Known RBP	13.16	□□□□□ -0.3
SPIN3-238	ENST00000640421	TMEM75	Q8N9X5	138 aa		13.16	□□□□□ -0.3
SPIN3-238	ENST00000640421	AGPAT4-IT1	Q9H0P7	198 aa		13.16	□□□□□ -0.3
SPIN3-238	ENST00000640421	SAV1	Q9H4B6	383 aa	Predicted RBP	13.16	□□□□□ -0.3
SPIN3-238	ENST00000640421	RBAKDN	A6NC62	111 aa		13.15	□□□□□ -0.3
SPIN3-238	ENST00000640421	PGPEP1L	A6NFU8	196 aa		13.15	□□□□□ -0.3
SPIN3-238	ENST00000640421	KRTAP10-11	P60412	298 aa		13.15	□□□□□ -0.3
SPIN3-238	ENST00000640421	HIST1H1A	Q02539	215 aa	Predicted RBP	13.15	□□□□□ -0.3
SPIN3-238	ENST00000640421	TMEM183B	Q1AE95	376 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms