RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 FAM167A-AS1Q96KT0 104 aa11.94□□□□□ -0.5
COLCA2-206ENST00000638573 AAMDCQ9H7C9 122 aa11.94□□□□□ -0.5
COLCA2-206ENST00000638573 ALMS1Q8TCU4 4167 aa11.93□□□□□ -0.5
COLCA2-206ENST00000638573 A0A0J9YX75 114 aa11.93□□□□□ -0.5
COLCA2-206ENST00000638573 F6UB75 175 aa11.93□□□□□ -0.5
COLCA2-206ENST00000638573 BCL2L11O43521 198 aa11.93□□□□□ -0.5
COLCA2-206ENST00000638573 DUSP14O95147 198 aaKnown RBP11.93□□□□□ -0.5
COLCA2-206ENST00000638573 IGKV3-20P01619 116 aa11.93□□□□□ -0.5
COLCA2-206ENST00000638573 OR10J4P0C629 311 aa11.93□□□□□ -0.5
COLCA2-206ENST00000638573 CDC34P49427 236 aaPredicted RBP11.93□□□□□ -0.5
COLCA2-206ENST00000638573 EIF5AP63241 154 aaKnown RBP11.93□□□□□ -0.5
COLCA2-206ENST00000638573 RNF141Q8WVD5 230 aa11.93□□□□□ -0.5
COLCA2-206ENST00000638573 RPUSD4Q96CM3 377 aaKnown RBP11.93□□□□□ -0.5
COLCA2-206ENST00000638573 ZNF471Q9BX82 626 aaPredicted RBP11.93□□□□□ -0.5
COLCA2-206ENST00000638573 C1QTNF4Q9BXJ3 329 aa11.93□□□□□ -0.5
COLCA2-206ENST00000638573 PLECQ15149 4684 aaKnown RBP11.93□□□□□ -0.5
COLCA2-206ENST00000638573 AGRNO00468 2067 aa11.93□□□□□ -0.5
COLCA2-206ENST00000638573 C1QBP02746 253 aa11.92□□□□□ -0.5
COLCA2-206ENST00000638573 NBEAP1P0C6P0 100 aa11.92□□□□□ -0.5
COLCA2-206ENST00000638573 HLA-DMBP28068 263 aa11.92□□□□□ -0.5
COLCA2-206ENST00000638573 AKR1C8PQ5T2L2 129 aa11.92□□□□□ -0.5
COLCA2-206ENST00000638573 PQLC2Q6ZP29 291 aa11.92□□□□□ -0.5
COLCA2-206ENST00000638573 PHLDA1Q8WV24 401 aaPredicted RBP11.92□□□□□ -0.5
COLCA2-206ENST00000638573 SAT2Q96F10 170 aaPredicted RBP11.92□□□□□ -0.5
COLCA2-206ENST00000638573 CYTL1Q9NRR1 136 aa11.92□□□□□ -0.5
COLCA2-206ENST00000638573 NUPR2A6NF83 97 aa11.91□□□□□ -0.5
COLCA2-206ENST00000638573 RBMY1A1P0DJD3 496 aaKnown RBP11.91□□□□□ -0.5
COLCA2-206ENST00000638573 RBMY1CP0DJD4 496 aa11.91□□□□□ -0.5
COLCA2-206ENST00000638573 HIST1H1AQ02539 215 aaPredicted RBP11.91□□□□□ -0.5
COLCA2-206ENST00000638573 RBMY1FQ15415 496 aaKnown RBP11.91□□□□□ -0.5
COLCA2-206ENST00000638573 TMUB2Q71RG4 321 aa11.91□□□□□ -0.5
COLCA2-206ENST00000638573 OR8A1Q8NGG7 326 aa11.91□□□□□ -0.5
COLCA2-206ENST00000638573 FXYD5Q96DB9 178 aa11.91□□□□□ -0.5
COLCA2-206ENST00000638573 HYLS1Q96M11 299 aa11.91□□□□□ -0.5
COLCA2-206ENST00000638573 CLUHP3Q96NS8 147 aa11.91□□□□□ -0.5
COLCA2-206ENST00000638573 ACTR3CQ9C0K3 210 aaPredicted RBP11.91□□□□□ -0.5
COLCA2-206ENST00000638573 PPP1R14DQ9NXH3 145 aa11.91□□□□□ -0.5
COLCA2-206ENST00000638573 PRELID1Q9Y255 219 aa11.91□□□□□ -0.5
COLCA2-206ENST00000638573 CNN1P51911 297 aaKnown RBP11.9□□□□□ -0.5
COLCA2-206ENST00000638573 Q8NAQ8 132 aa11.9□□□□□ -0.5
COLCA2-206ENST00000638573 OR10J6PQ8NGY7 276 aa11.9□□□□□ -0.5
COLCA2-206ENST00000638573 MRPL53Q96EL3 112 aaKnown RBP11.9□□□□□ -0.5
COLCA2-206ENST00000638573 IGHV4-28A0A0C4DH34 117 aa11.89□□□□□ -0.51
COLCA2-206ENST00000638573 HMGB3O15347 200 aaKnown RBP11.89□□□□□ -0.51
COLCA2-206ENST00000638573 RPP25LQ8N5L8 163 aaKnown RBP11.89□□□□□ -0.51
COLCA2-206ENST00000638573 RAB24Q969Q5 203 aa11.89□□□□□ -0.51
COLCA2-206ENST00000638573 A0A1B0GVG6 124 aa11.88□□□□□ -0.51
COLCA2-206ENST00000638573 ZNF705FA8MVS1 300 aaPredicted RBP11.88□□□□□ -0.51
COLCA2-206ENST00000638573 EIF3GO75821 320 aaKnown RBP eCLIP11.88□□□□□ -0.51
COLCA2-206ENST00000638573 NDUFB4O95168 129 aa11.88□□□□□ -0.51
COLCA2-206ENST00000638573 ZNF705DP0CH99 300 aaPredicted RBP11.88□□□□□ -0.51
COLCA2-206ENST00000638573 ZNF705BP0CI00 300 aaPredicted RBP11.88□□□□□ -0.51
COLCA2-206ENST00000638573 TPT1P13693 172 aaKnown RBP11.88□□□□□ -0.51
COLCA2-206ENST00000638573 ZFP69Q49AA0 526 aa11.88□□□□□ -0.51
COLCA2-206ENST00000638573 EXOC3-AS1Q8N2X6 119 aa11.88□□□□□ -0.51
COLCA2-206ENST00000638573 ZNF503Q96F45 646 aa11.88□□□□□ -0.51
COLCA2-206ENST00000638573 PHYHIPLQ96FC7 376 aa11.88□□□□□ -0.51
COLCA2-206ENST00000638573 C11orf68Q9H3H3 251 aaKnown RBP11.88□□□□□ -0.51
COLCA2-206ENST00000638573 XCL2Q9UBD3 114 aa11.88□□□□□ -0.51
COLCA2-206ENST00000638573 X6R8D5 127 aa11.88□□□□□ -0.51
COLCA2-206ENST00000638573 AMBPP02760 352 aa11.87□□□□□ -0.51
COLCA2-206ENST00000638573 STAG3L2P0CL84 134 aa11.87□□□□□ -0.51
COLCA2-206ENST00000638573 STAG3L3P0CL85 134 aa11.87□□□□□ -0.51
COLCA2-206ENST00000638573 ARL14EPLP0DKL9 152 aa11.87□□□□□ -0.51
COLCA2-206ENST00000638573 CSN1S1P47710 185 aa11.87□□□□□ -0.51
COLCA2-206ENST00000638573 FXYD7P58549 80 aa11.87□□□□□ -0.51
COLCA2-206ENST00000638573 ICAM4Q14773 271 aa11.87□□□□□ -0.51
COLCA2-206ENST00000638573 FAM74A1Q5RGS3 127 aa11.87□□□□□ -0.51
COLCA2-206ENST00000638573 LYPD1Q8N2G4 141 aa11.87□□□□□ -0.51
COLCA2-206ENST00000638573 C11orf45Q8TAV5 145 aa11.87□□□□□ -0.51
COLCA2-206ENST00000638573 SLC35B3Q9H1N7 401 aa11.87□□□□□ -0.51
COLCA2-206ENST00000638573 CTXND1A0A1B0GTU2 59 aa11.86□□□□□ -0.51
COLCA2-206ENST00000638573 A8MTW9 85 aa11.86□□□□□ -0.51
COLCA2-206ENST00000638573 CXorf1O96002 111 aa11.86□□□□□ -0.51
COLCA2-206ENST00000638573 SEC11BP0C7V7 166 aa11.86□□□□□ -0.51
COLCA2-206ENST00000638573 RANP62826 216 aaKnown RBP11.86□□□□□ -0.51
COLCA2-206ENST00000638573 LGALSLQ3ZCW2 172 aaPredicted RBP11.86□□□□□ -0.51
COLCA2-206ENST00000638573 ZNF767PQ75MW2 155 aa11.86□□□□□ -0.51
COLCA2-206ENST00000638573 IQCF2Q8IXL9 164 aa11.86□□□□□ -0.51
COLCA2-206ENST00000638573 CSNK1G2-AS1Q8NCQ2 148 aa11.86□□□□□ -0.51
COLCA2-206ENST00000638573 Q9H3A6 140 aa11.86□□□□□ -0.51
COLCA2-206ENST00000638573 CELA1Q9UNI1 258 aa11.86□□□□□ -0.51
COLCA2-206ENST00000638573 BOLA2-SMG1P6H3BVE0 249 aa11.85□□□□□ -0.51
COLCA2-206ENST00000638573 M0R3E3 92 aa11.85□□□□□ -0.51
COLCA2-206ENST00000638573 PRB4P10163 310 aaPredicted RBP11.85□□□□□ -0.51
COLCA2-206ENST00000638573 BAP18Q8IXM2 172 aa11.85□□□□□ -0.51
COLCA2-206ENST00000638573 CMTM2Q8TAZ6 248 aa11.85□□□□□ -0.51
COLCA2-206ENST00000638573 TMEM167BQ9NRX6 74 aa11.85□□□□□ -0.51
COLCA2-206ENST00000638573 UMAD1C9J7I0 102 aa11.84□□□□□ -0.51
COLCA2-206ENST00000638573 PRAC2D3DTV9 90 aa11.84□□□□□ -0.51
COLCA2-206ENST00000638573 GCHFRP30047 84 aa11.84□□□□□ -0.51
COLCA2-206ENST00000638573 SPINK13Q1W4C9 94 aa11.84□□□□□ -0.51
COLCA2-206ENST00000638573 EIF5AL1Q6IS14 154 aaKnown RBP11.84□□□□□ -0.51
COLCA2-206ENST00000638573 AMTNQ6UX39 209 aa11.84□□□□□ -0.51
COLCA2-206ENST00000638573 STOML3Q8TAV4 291 aa11.84□□□□□ -0.51
COLCA2-206ENST00000638573 KLK5Q9Y337 293 aaPredicted RBP11.84□□□□□ -0.51
COLCA2-206ENST00000638573 GOLT1BQ9Y3E0 138 aa11.84□□□□□ -0.51
COLCA2-206ENST00000638573 BIRC6Q9NR09 4857 aa11.84□□□□□ -0.51
COLCA2-206ENST00000638573 ZNF705EA8MWA4 302 aaPredicted RBP11.83□□□□□ -0.52
COLCA2-206ENST00000638573 INSP01308 110 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms