RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 LCN12Q6JVE5 192 aa10.05□□□□□ -0.8
LINC00643-207ENST00000637212 GBGT1Q8N5D6 347 aa10.05□□□□□ -0.8
LINC00643-207ENST00000637212 C11orf52Q96A22 123 aa10.05□□□□□ -0.8
LINC00643-207ENST00000637212 TREM1Q9NP99 234 aa10.05□□□□□ -0.8
LINC00643-207ENST00000637212 IGKV3-7A0A075B6H7 116 aa10.04□□□□□ -0.8
LINC00643-207ENST00000637212 WIPF1O43516 503 aa10.04□□□□□ -0.8
LINC00643-207ENST00000637212 S100A9P06702 114 aaKnown RBP10.04□□□□□ -0.8
LINC00643-207ENST00000637212 WFDC3Q8IUB2 231 aa10.04□□□□□ -0.8
LINC00643-207ENST00000637212 SLC7A5P1Q8MH63 180 aa10.04□□□□□ -0.8
LINC00643-207ENST00000637212 NBEAL1Q6ZS30 2694 aa10.03□□□□□ -0.8
LINC00643-207ENST00000637212 DIRC3C9JPN6 131 aa10.03□□□□□ -0.8
LINC00643-207ENST00000637212 C9JQL5 133 aa10.03□□□□□ -0.8
LINC00643-207ENST00000637212 TCRAP04437 139 aa10.03□□□□□ -0.8
LINC00643-207ENST00000637212 TFPI2P48307 235 aa10.03□□□□□ -0.8
LINC00643-207ENST00000637212 PRR31Q5SQ13 230 aa10.03□□□□□ -0.8
LINC00643-207ENST00000637212 LINC00052Q96N35 136 aa10.03□□□□□ -0.8
LINC00643-207ENST00000637212 ATG101Q9BSB4 218 aa10.03□□□□□ -0.8
LINC00643-207ENST00000637212 ZNF256Q9Y2P7 627 aaPredicted RBP10.03□□□□□ -0.8
LINC00643-207ENST00000637212 KLF12Q9Y4X4 402 aa10.03□□□□□ -0.8
LINC00643-207ENST00000637212 SELENOKQ9Y6D0 94 aa10.03□□□□□ -0.8
LINC00643-207ENST00000637212 TMEM218A2RU14 115 aa10.02□□□□□ -0.81
LINC00643-207ENST00000637212 RBAKDNA6NC62 111 aa10.02□□□□□ -0.81
LINC00643-207ENST00000637212 FBLL1A6NHQ2 334 aaKnown RBP10.02□□□□□ -0.81
LINC00643-207ENST00000637212 K7EQM0 130 aa10.02□□□□□ -0.81
LINC00643-207ENST00000637212 PEX7O00628 323 aa10.02□□□□□ -0.81
LINC00643-207ENST00000637212 BEAN1Q3B7T3 259 aa10.02□□□□□ -0.81
LINC00643-207ENST00000637212 FAM74A3Q4VXF1 159 aa10.02□□□□□ -0.81
LINC00643-207ENST00000637212 IGFL4Q6B9Z1 124 aa10.02□□□□□ -0.81
LINC00643-207ENST00000637212 TENM1Q9UKZ4 2725 aa10.01□□□□□ -0.81
LINC00643-207ENST00000637212 TRBV6-1A0A0K0K1D8 114 aa10.01□□□□□ -0.81
LINC00643-207ENST00000637212 IZUMO1RA6ND01 250 aa10.01□□□□□ -0.81
LINC00643-207ENST00000637212 M0R3E3 92 aa10.01□□□□□ -0.81
LINC00643-207ENST00000637212 HLA-DMBP28068 263 aa10.01□□□□□ -0.81
LINC00643-207ENST00000637212 TAS2R60P59551 318 aa10.01□□□□□ -0.81
LINC00643-207ENST00000637212 GUCA2BQ16661 112 aa10.01□□□□□ -0.81
LINC00643-207ENST00000637212 RNF182Q8N6D2 247 aa10.01□□□□□ -0.81
LINC00643-207ENST00000637212 CYB561D1Q8N8Q1 229 aa10.01□□□□□ -0.81
LINC00643-207ENST00000637212 ZNF738Q8NE65 137 aa10.01□□□□□ -0.81
LINC00643-207ENST00000637212 C20orf173Q96LM9 149 aa10.01□□□□□ -0.81
LINC00643-207ENST00000637212 CITED4Q96RK1 184 aa10.01□□□□□ -0.81
LINC00643-207ENST00000637212 FAM110AQ9BQ89 295 aa10.01□□□□□ -0.81
LINC00643-207ENST00000637212 ZMAT5Q9UDW3 170 aaKnown RBP10.01□□□□□ -0.81
LINC00643-207ENST00000637212 SCO2A0A1W2PP80 73 aa10□□□□□ -0.81
LINC00643-207ENST00000637212 ZNF705FA8MVS1 300 aaPredicted RBP10□□□□□ -0.81
LINC00643-207ENST00000637212 IGLL1P15814 213 aa10□□□□□ -0.81
LINC00643-207ENST00000637212 CNN1P51911 297 aaKnown RBP10□□□□□ -0.81
LINC00643-207ENST00000637212 TMEM183BQ1AE95 376 aa10□□□□□ -0.81
LINC00643-207ENST00000637212 SOHLH1Q5JUK2 328 aa10□□□□□ -0.81
LINC00643-207ENST00000637212 GOLT1AQ6ZVE7 132 aa10□□□□□ -0.81
LINC00643-207ENST00000637212 C2CD4CQ8TF44 421 aa10□□□□□ -0.81
LINC00643-207ENST00000637212 KRTAP3-3Q9BYR6 98 aa10□□□□□ -0.81
LINC00643-207ENST00000637212 KRTAP3-2Q9BYR7 98 aa10□□□□□ -0.81
LINC00643-207ENST00000637212 KRBOX1C9JBD0 128 aa9.99□□□□□ -0.81
LINC00643-207ENST00000637212 SFTA3P0C7M3 94 aa9.99□□□□□ -0.81
LINC00643-207ENST00000637212 ZNF688P0C7X2 276 aa9.99□□□□□ -0.81
LINC00643-207ENST00000637212 AKR1C3P42330 323 aa9.99□□□□□ -0.81
LINC00643-207ENST00000637212 GNG5P63218 68 aa9.99□□□□□ -0.81
LINC00643-207ENST00000637212 PSMG4Q5JS54 123 aa9.99□□□□□ -0.81
LINC00643-207ENST00000637212 FAM24BQ8N5W8 94 aa9.99□□□□□ -0.81
LINC00643-207ENST00000637212 TMEM75Q8N9X5 138 aa9.99□□□□□ -0.81
LINC00643-207ENST00000637212 OR10J6PQ8NGY7 276 aa9.99□□□□□ -0.81
LINC00643-207ENST00000637212 FMC1Q96HJ9 113 aa9.99□□□□□ -0.81
LINC00643-207ENST00000637212 LINC00477Q96M19 166 aa9.99□□□□□ -0.81
LINC00643-207ENST00000637212 PPP1R14DQ9NXH3 145 aa9.99□□□□□ -0.81
LINC00643-207ENST00000637212 PRAC2D3DTV9 90 aa9.98□□□□□ -0.81
LINC00643-207ENST00000637212 RPL35P42766 123 aaKnown RBP9.98□□□□□ -0.81
LINC00643-207ENST00000637212 EBLN2Q6P2I7 272 aa9.98□□□□□ -0.81
LINC00643-207ENST00000637212 C9orf47Q6ZRZ4 202 aa9.98□□□□□ -0.81
LINC00643-207ENST00000637212 OR8A1Q8NGG7 326 aa9.98□□□□□ -0.81
LINC00643-207ENST00000637212 SEC11CQ9BY50 192 aa9.98□□□□□ -0.81
LINC00643-207ENST00000637212 PARLQ9H300 379 aa9.98□□□□□ -0.81
LINC00643-207ENST00000637212 ZNF727A8MUV8 499 aa9.97□□□□□ -0.81
LINC00643-207ENST00000637212 DUSP14O95147 198 aaKnown RBP9.97□□□□□ -0.81
LINC00643-207ENST00000637212 CEBPGP53567 150 aa9.97□□□□□ -0.81
LINC00643-207ENST00000637212 DEFB131AP59861 70 aa9.97□□□□□ -0.81
LINC00643-207ENST00000637212 UBE2G1P62253 170 aa9.97□□□□□ -0.81
LINC00643-207ENST00000637212 C10orf91Q5T1B1 145 aa9.97□□□□□ -0.81
LINC00643-207ENST00000637212 FOXI2Q6ZQN5 318 aa9.97□□□□□ -0.81
LINC00643-207ENST00000637212 LINC00479Q96M42 142 aa9.97□□□□□ -0.81
LINC00643-207ENST00000637212 SAV1Q9H4B6 383 aaPredicted RBP9.97□□□□□ -0.81
LINC00643-207ENST00000637212 MAP6D1Q9H9H5 199 aa9.97□□□□□ -0.81
LINC00643-207ENST00000637212 RPH3ALQ9UNE2 315 aa9.97□□□□□ -0.81
LINC00643-207ENST00000637212 ZFP30Q9Y2G7 519 aa9.97□□□□□ -0.81
LINC00643-207ENST00000637212 WNK1Q9H4A3 2382 aa9.97□□□□□ -0.81
LINC00643-207ENST00000637212 TRAV34A0A0B4J273 112 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 TRBV7-9A0A0J9YWB2 115 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 A0A0J9YX75 114 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 OR11H12B2RN74 326 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 C9JCJ5 164 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 NPIPB6E9PJ23 425 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 F8W036 122 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 IGLV2-11P01706 119 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 TMEM241Q24JQ0 296 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 ZNF674Q2M3X9 581 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 SAPCD1Q5SSQ6 148 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 SMIM12Q96EX1 92 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 CLUHP3Q96NS8 147 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 VGLL1Q99990 258 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 SMIM7Q9BQ49 75 aa9.96□□□□□ -0.82
LINC00643-207ENST00000637212 AGPAT4-IT1Q9H0P7 198 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms