RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 ODF3BA8MYP8 253 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 SYS1-DBNDD2H3BUS1 97 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 HLA-DRB1P01911 266 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 SLC25A5P05141 298 aaKnown RBP12.19□□□□□ -0.46
CLN8-209ENST00000635970 PRR27Q6MZM9 219 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 PET117Q6UWS5 81 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 LINC00305Q7Z4B0 112 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 C5orf17Q8NAS9 161 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 OR10X1Q8NGY0 326 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 NPIPB3Q92617 1050 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 IGKV1D-37A0A075B6S9 117 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 C19orf71A6NCJ1 209 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 LEPROTL1O95214 131 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 P01737 135 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 RHOGP84095 191 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 RBPMS2Q6ZRY4 209 aaKnown RBP12.18□□□□□ -0.46
CLN8-209ENST00000635970 OR4C5Q8NGB2 326 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 OR11H6Q8NGC7 330 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 AJUBAQ96IF1 538 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 DUX5Q96PT3 197 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 ESM1Q9NQ30 184 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 LTAP01374 205 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 PVRIGQ6DKI7 326 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 SLC25A34Q6PIV7 304 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 DAZAP1Q96EP5 407 aaKnown RBP12.18□□□□□ -0.46
CLN8-209ENST00000635970 URB1-AS1Q96HZ7 61 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 TRGV9Q99603 122 aa12.18□□□□□ -0.46
CLN8-209ENST00000635970 FNDC4Q9H6D8 234 aaPredicted RBP12.18□□□□□ -0.46
CLN8-209ENST00000635970 PGPA6NDG6 321 aa12.17□□□□□ -0.46
CLN8-209ENST00000635970 NBEAP1P0C6P0 100 aa12.17□□□□□ -0.46
CLN8-209ENST00000635970 RIPPLY3P57055 190 aa12.17□□□□□ -0.46
CLN8-209ENST00000635970 DYNAPQ8N1N2 210 aa12.17□□□□□ -0.46
CLN8-209ENST00000635970 LINC00311Q8N616 119 aa12.17□□□□□ -0.46
CLN8-209ENST00000635970 RNASE8Q8TDE3 154 aaKnown RBP12.17□□□□□ -0.46
CLN8-209ENST00000635970 ZNF418Q8TF45 676 aaPredicted RBP12.17□□□□□ -0.46
CLN8-209ENST00000635970 SSBP4Q9BWG4 385 aaPredicted RBP12.17□□□□□ -0.46
CLN8-209ENST00000635970 MAP1LC3CQ9BXW4 147 aa12.17□□□□□ -0.46
CLN8-209ENST00000635970 MRPL20Q9BYC9 149 aaKnown RBP12.17□□□□□ -0.46
CLN8-209ENST00000635970 HSPB8Q9UJY1 196 aa12.17□□□□□ -0.46
CLN8-209ENST00000635970 CRYGCP07315 174 aa12.16□□□□□ -0.46
CLN8-209ENST00000635970 WT1-ASQ06250 92 aa12.16□□□□□ -0.46
CLN8-209ENST00000635970 FBN1P35555 2871 aaKnown RBP12.16□□□□□ -0.46
CLN8-209ENST00000635970 IGHV1-24A0A0C4DH33 117 aa12.16□□□□□ -0.46
CLN8-209ENST00000635970 NPIPB6E9PJ23 425 aa12.16□□□□□ -0.46
CLN8-209ENST00000635970 MOSP00540 346 aa12.16□□□□□ -0.46
CLN8-209ENST00000635970 IGLV1-47P01700 117 aa12.16□□□□□ -0.46
CLN8-209ENST00000635970 MC5RP33032 325 aa12.16□□□□□ -0.46
CLN8-209ENST00000635970 HILS1P60008 231 aa12.16□□□□□ -0.46
CLN8-209ENST00000635970 PLP1P60201 277 aa12.16□□□□□ -0.46
CLN8-209ENST00000635970 VMA21Q3ZAQ7 101 aa12.16□□□□□ -0.46
CLN8-209ENST00000635970 PMCHL2Q9BQD1 86 aa12.16□□□□□ -0.46
CLN8-209ENST00000635970 TRBV6-1A0A0K0K1D8 114 aa12.15□□□□□ -0.46
CLN8-209ENST00000635970 DNAJC9-AS1A6NH13 148 aa12.15□□□□□ -0.46
CLN8-209ENST00000635970 HAX1O00165 279 aa12.15□□□□□ -0.46
CLN8-209ENST00000635970 HOXA3O43365 443 aaPredicted RBP12.15□□□□□ -0.46
CLN8-209ENST00000635970 FOXA3P55318 350 aaPredicted RBP12.15□□□□□ -0.46
CLN8-209ENST00000635970 DEFB125Q8N687 156 aa12.15□□□□□ -0.46
CLN8-209ENST00000635970 WASHC3Q9Y3C0 194 aa12.15□□□□□ -0.46
CLN8-209ENST00000635970 CORTO00230 105 aa12.14□□□□□ -0.47
CLN8-209ENST00000635970 LGALS7P47929 136 aa12.14□□□□□ -0.47
CLN8-209ENST00000635970 VAMP3Q15836 100 aa12.14□□□□□ -0.47
CLN8-209ENST00000635970 Q6YL49 198 aa12.14□□□□□ -0.47
CLN8-209ENST00000635970 CLEC5AQ9NY25 188 aa12.14□□□□□ -0.47
CLN8-209ENST00000635970 HILPDAQ9Y5L2 63 aa12.14□□□□□ -0.47
CLN8-209ENST00000635970 LOC102724200A0A096LPH7 203 aaPredicted RBP12.14□□□□□ -0.47
CLN8-209ENST00000635970 A0A1B0GW15 77 aa12.14□□□□□ -0.47
CLN8-209ENST00000635970 CGB1A6NKQ9 187 aa12.14□□□□□ -0.47
CLN8-209ENST00000635970 CHEK1O14757 476 aa12.14□□□□□ -0.47
CLN8-209ENST00000635970 IGHV4-59P01825 116 aa12.14□□□□□ -0.47
CLN8-209ENST00000635970 GNG5P63218 68 aa12.14□□□□□ -0.47
CLN8-209ENST00000635970 SSBP2P81877 361 aaPredicted RBP12.14□□□□□ -0.47
CLN8-209ENST00000635970 TCF24Q7RTU0 167 aa12.14□□□□□ -0.47
CLN8-209ENST00000635970 TMEM116Q8NCL8 245 aa12.14□□□□□ -0.47
CLN8-209ENST00000635970 E7EUB6 86 aa12.13□□□□□ -0.47
CLN8-209ENST00000635970 PPBPP02775 128 aa12.13□□□□□ -0.47
CLN8-209ENST00000635970 TCRAP04437 139 aa12.13□□□□□ -0.47
CLN8-209ENST00000635970 HTR1DP28221 377 aa12.13□□□□□ -0.47
CLN8-209ENST00000635970 ZNF137PP52743 207 aa12.13□□□□□ -0.47
CLN8-209ENST00000635970 COTL1Q14019 142 aa12.13□□□□□ -0.47
CLN8-209ENST00000635970 BVES-AS1Q5T3Y7 98 aa12.13□□□□□ -0.47
CLN8-209ENST00000635970 SPATA12Q7Z6I5 190 aa12.13□□□□□ -0.47
CLN8-209ENST00000635970 GTSF1Q8WW33 167 aa12.13□□□□□ -0.47
CLN8-209ENST00000635970 SCRT2Q9NQ03 307 aa12.13□□□□□ -0.47
CLN8-209ENST00000635970 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.12□□□□□ -0.47
CLN8-209ENST00000635970 BUB1B-PAK6H3BSN5 160 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 IGLV2-23P01705 113 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 HIST1H1AQ02539 215 aaPredicted RBP12.12□□□□□ -0.47
CLN8-209ENST00000635970 DIAPH2-AS1Q14236 149 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 C21orf62-AS1Q17RA5 79 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 MPV17L2Q567V2 206 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 GATD1Q8NB37 220 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 OR1B1Q8NGR6 318 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 TNCP24821 2201 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 ORM2P19652 201 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 MINOS1Q5TGZ0 78 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 BLNKQ8WV28 456 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 DPF1Q92782 380 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 PGLYRP4Q96LB8 373 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 OTORQ9NRC9 128 aa12.12□□□□□ -0.47
CLN8-209ENST00000635970 TMEM14CQ9P0S9 112 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms