RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PQLC2Q6ZP29 291 aa11.03□□□□□ -0.64
LINC00339-208ENST00000634934 GBGT1Q8N5D6 347 aa11.03□□□□□ -0.64
LINC00339-208ENST00000634934 TMEM190Q8WZ59 177 aa11.03□□□□□ -0.64
LINC00339-208ENST00000634934 RNF125Q96EQ8 232 aa11.03□□□□□ -0.64
LINC00339-208ENST00000634934 ORM2P19652 201 aa11.02□□□□□ -0.65
LINC00339-208ENST00000634934 CST9LP1Q5W188 147 aa11.02□□□□□ -0.65
LINC00339-208ENST00000634934 OR1B1Q8NGR6 318 aa11.02□□□□□ -0.65
LINC00339-208ENST00000634934 MRPL32Q9BYC8 188 aaKnown RBP11.02□□□□□ -0.65
LINC00339-208ENST00000634934 ZFAND3Q9H8U3 227 aa11.02□□□□□ -0.65
LINC00339-208ENST00000634934 IL36BQ9NZH7 164 aa11.02□□□□□ -0.65
LINC00339-208ENST00000634934 FUT9Q9Y231 359 aa11.02□□□□□ -0.65
LINC00339-208ENST00000634934 UFC1Q9Y3C8 167 aa11.02□□□□□ -0.65
LINC00339-208ENST00000634934 TRBV20OR9-2A0A075B6H5 130 aa11.01□□□□□ -0.65
LINC00339-208ENST00000634934 WI2-2373I1.2A0A1W2PRP0 233 aa11.01□□□□□ -0.65
LINC00339-208ENST00000634934 OVOL1O14753 267 aa11.01□□□□□ -0.65
LINC00339-208ENST00000634934 OR5G3P0C626 314 aa11.01□□□□□ -0.65
LINC00339-208ENST00000634934 USF2Q15853 346 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-208ENST00000634934 TM4SF20Q53R12 229 aa11.01□□□□□ -0.65
LINC00339-208ENST00000634934 GCSAMLQ5JQS6 135 aa11.01□□□□□ -0.65
LINC00339-208ENST00000634934 MRPL52Q86TS9 123 aaKnown RBP11.01□□□□□ -0.65
LINC00339-208ENST00000634934 LINC00482Q8N8I6 264 aa11.01□□□□□ -0.65
LINC00339-208ENST00000634934 OR10G8Q8NGN5 311 aa11.01□□□□□ -0.65
LINC00339-208ENST00000634934 NBEAL1Q6ZS30 2694 aa11.01□□□□□ -0.65
LINC00339-208ENST00000634934 A0A1W2PRE2 83 aa11□□□□□ -0.65
LINC00339-208ENST00000634934 LGALS9O00182 355 aa11□□□□□ -0.65
LINC00339-208ENST00000634934 TAS2R45P59539 299 aa11□□□□□ -0.65
LINC00339-208ENST00000634934 IQCJQ1A5X6 159 aa11□□□□□ -0.65
LINC00339-208ENST00000634934 FAM78BQ5VT40 261 aa11□□□□□ -0.65
LINC00339-208ENST00000634934 OR9G4Q8NGQ1 327 aa11□□□□□ -0.65
LINC00339-208ENST00000634934 C14orf144Q96I85 54 aa11□□□□□ -0.65
LINC00339-208ENST00000634934 DAZ1Q9NQZ3 744 aaKnown RBP11□□□□□ -0.65
LINC00339-208ENST00000634934 TECRQ9NZ01 308 aaKnown RBP11□□□□□ -0.65
LINC00339-208ENST00000634934 PEMTQ9UBM1 199 aa11□□□□□ -0.65
LINC00339-208ENST00000634934 IGHV3-49A0A0A0MS15 119 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 COX7A2P2O60397 106 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 HYPMO75409 117 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 MT-ND6P03923 174 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 PAFAH1B2P68402 229 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 METTL26Q96S19 204 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 RABAC1Q9UI14 185 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 YTHDF2Q9Y5A9 579 aaKnown RBP10.99□□□□□ -0.65
LINC00339-208ENST00000634934 TRAPPC1Q9Y5R8 145 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 IGHV3OR16-13A0A075B7E8 117 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 IGHV3-74A0A0B4J1X5 117 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 A8MWP6 167 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 K7EMT4 169 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 EDN2P20800 178 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 SSTP61278 116 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 CDPF1Q6NVV7 123 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 OCC1Q8TAD7 63 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 C2orf88Q9BSF0 95 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 OSTCQ9NRP0 149 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 HIGD1AQ9Y241 93 aa10.99□□□□□ -0.65
LINC00339-208ENST00000634934 IGHV3-66A0A0C4DH42 116 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 SCO2A0A1W2PP80 73 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 TMEM213A2RRL7 107 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 C2orf70A6NJV1 201 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 CD33P20138 364 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 PLP1P60201 277 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 Q0VG73 95 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 PDZD11Q5EBL8 140 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 C10orf113Q5VZT2 155 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 OR1L4Q8NGR5 311 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 NDUFAF3Q9BU61 184 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 DERL1Q9BUN8 251 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 GNB1LQ9BYB4 327 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 SEPSECSQ9HD40 501 aaKnown RBP10.98□□□□□ -0.65
LINC00339-208ENST00000634934 DNAJC4Q9NNZ3 241 aa10.98□□□□□ -0.65
LINC00339-208ENST00000634934 MRPL27Q9P0M9 148 aaKnown RBP10.98□□□□□ -0.65
LINC00339-208ENST00000634934 IGHV7-4-1A0A0J9YVY3 117 aa10.97□□□□□ -0.65
LINC00339-208ENST00000634934 UBE2G2P60604 165 aa10.97□□□□□ -0.65
LINC00339-208ENST00000634934 RAB4BP61018 213 aa10.97□□□□□ -0.65
LINC00339-208ENST00000634934 PRR31Q5SQ13 230 aa10.97□□□□□ -0.65
LINC00339-208ENST00000634934 WDR73Q6P4I2 378 aa10.97□□□□□ -0.65
LINC00339-208ENST00000634934 PATE2Q6UY27 113 aa10.97□□□□□ -0.65
LINC00339-208ENST00000634934 TMEM37Q8WXS4 190 aa10.97□□□□□ -0.65
LINC00339-208ENST00000634934 ISLRO14498 428 aa10.96□□□□□ -0.65
LINC00339-208ENST00000634934 APOHP02749 345 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-208ENST00000634934 CSN3P07498 182 aa10.96□□□□□ -0.65
LINC00339-208ENST00000634934 CBLN1P23435 193 aa10.96□□□□□ -0.65
LINC00339-208ENST00000634934 CRYBB3P26998 211 aa10.96□□□□□ -0.65
LINC00339-208ENST00000634934 TAS2R60P59551 318 aa10.96□□□□□ -0.65
LINC00339-208ENST00000634934 RASL11AQ6T310 242 aa10.96□□□□□ -0.65
LINC00339-208ENST00000634934 SMPXQ9UHP9 88 aa10.96□□□□□ -0.65
LINC00339-208ENST00000634934 SELENOKQ9Y6D0 94 aa10.96□□□□□ -0.65
LINC00339-208ENST00000634934 FBN3Q75N90 2809 aa10.96□□□□□ -0.66
LINC00339-208ENST00000634934 MGAM2Q2M2H8 2515 aa10.96□□□□□ -0.66
LINC00339-208ENST00000634934 SAP30O75446 220 aa10.95□□□□□ -0.66
LINC00339-208ENST00000634934 S100A7P31151 101 aa10.95□□□□□ -0.66
LINC00339-208ENST00000634934 RANP62826 216 aaKnown RBP10.95□□□□□ -0.66
LINC00339-208ENST00000634934 LINC00305Q7Z4B0 112 aa10.95□□□□□ -0.66
LINC00339-208ENST00000634934 S100A7AQ86SG5 101 aa10.95□□□□□ -0.66
LINC00339-208ENST00000634934 SMIM12Q96EX1 92 aa10.95□□□□□ -0.66
LINC00339-208ENST00000634934 RHPN1-AS1Q9BWJ2 59 aa10.95□□□□□ -0.66
LINC00339-208ENST00000634934 SLC25A39Q9BZJ4 359 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-208ENST00000634934 KIR2DL5BA0A0G2JN68 375 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 KIR2DL5BA0A0G2JPC4 375 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 A0A1W2PS18 150 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 K7EN84 100 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 C8orf88P0DMB2 117 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms