RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 TRPT1Q86TN4 253 aaKnown RBP10.29□□□□□ -0.76
SCN8A-209ENST00000627620 PRIMA1Q86XR5 153 aa10.29□□□□□ -0.76
SCN8A-209ENST00000627620 TCF20Q9UGU0 1960 aaKnown RBP10.29□□□□□ -0.76
SCN8A-209ENST00000627620 DIDO1Q9BTC0 2240 aaKnown RBP10.29□□□□□ -0.76
SCN8A-209ENST00000627620 LOXP28300 417 aaPredicted RBP10.29□□□□□ -0.76
SCN8A-209ENST00000627620 WDR86Q86TI4 376 aa10.29□□□□□ -0.76
SCN8A-209ENST00000627620 C8orf49Q96NF6 230 aa10.29□□□□□ -0.76
SCN8A-209ENST00000627620 LEPROTO15243 131 aa10.29□□□□□ -0.76
SCN8A-209ENST00000627620 SPINK13Q1W4C9 94 aa10.29□□□□□ -0.76
SCN8A-209ENST00000627620 SIGMAR1Q99720 223 aa10.28□□□□□ -0.76
SCN8A-209ENST00000627620 TMEM213A2RRL7 107 aa10.28□□□□□ -0.76
SCN8A-209ENST00000627620 ZNF503-AS2A6NEH8 195 aa10.28□□□□□ -0.76
SCN8A-209ENST00000627620 CFHR2P36980 270 aa10.28□□□□□ -0.76
SCN8A-209ENST00000627620 SPAG8Q99932 426 aaPredicted RBP10.28□□□□□ -0.76
SCN8A-209ENST00000627620 CADP27708 2225 aa10.28□□□□□ -0.76
SCN8A-209ENST00000627620 PFN1P07737 140 aaKnown RBP10.28□□□□□ -0.76
SCN8A-209ENST00000627620 MPV17L2Q567V2 206 aa10.28□□□□□ -0.76
SCN8A-209ENST00000627620 ANAPC13Q9BS18 74 aa10.28□□□□□ -0.76
SCN8A-209ENST00000627620 PI4KAP42356 2102 aa10.28□□□□□ -0.76
SCN8A-209ENST00000627620 NCOR1P1Q9H4R4 102 aa10.28□□□□□ -0.76
SCN8A-209ENST00000627620 ADCYAP1P18509 176 aa10.27□□□□□ -0.76
SCN8A-209ENST00000627620 SSBP2P81877 361 aaPredicted RBP10.27□□□□□ -0.76
SCN8A-209ENST00000627620 ARTNQ5T4W7 220 aa10.27□□□□□ -0.76
SCN8A-209ENST00000627620 ZNF492Q9P255 531 aa10.27□□□□□ -0.76
SCN8A-209ENST00000627620 KLK9Q9UKQ9 250 aa10.27□□□□□ -0.77
SCN8A-209ENST00000627620 PKDREJQ9NTG1 2253 aa10.27□□□□□ -0.77
SCN8A-209ENST00000627620 SIP14410 1827 aa10.27□□□□□ -0.77
SCN8A-209ENST00000627620 TRBV19A0A075B6N1 114 aa10.27□□□□□ -0.77
SCN8A-209ENST00000627620 LGALS1P09382 135 aaKnown RBP10.27□□□□□ -0.77
SCN8A-209ENST00000627620 ABCA4P78363 2273 aa10.27□□□□□ -0.77
SCN8A-209ENST00000627620 INS-IGF2F8WCM5 200 aa10.27□□□□□ -0.77
SCN8A-209ENST00000627620 ESDP10768 282 aa10.27□□□□□ -0.77
SCN8A-209ENST00000627620 CFHR3Q02985 330 aa10.27□□□□□ -0.77
SCN8A-209ENST00000627620 C1orf147Q96MC9 270 aaPredicted RBP10.27□□□□□ -0.77
SCN8A-209ENST00000627620 PLXNA3P51805 1871 aa10.27□□□□□ -0.77
SCN8A-209ENST00000627620 PLA2G2CQ5R387 149 aa10.26□□□□□ -0.77
SCN8A-209ENST00000627620 FNDC1Q4ZHG4 1894 aaPredicted RBP10.26□□□□□ -0.77
SCN8A-209ENST00000627620 GAGE12JA6NER3 117 aa10.26□□□□□ -0.77
SCN8A-209ENST00000627620 GAGE1Q13065 139 aa10.26□□□□□ -0.77
SCN8A-209ENST00000627620 GAGE4Q13068 117 aa10.26□□□□□ -0.77
SCN8A-209ENST00000627620 GAGE5Q13069 117 aa10.26□□□□□ -0.77
SCN8A-209ENST00000627620 C2orf82Q6UX34 121 aa10.26□□□□□ -0.77
SCN8A-209ENST00000627620 CR1LQ2VPA4 569 aa10.26□□□□□ -0.77
SCN8A-209ENST00000627620 PYY3Q5JQD4 70 aa10.26□□□□□ -0.77
SCN8A-209ENST00000627620 TEX36Q5VZQ5 186 aa10.26□□□□□ -0.77
SCN8A-209ENST00000627620 IGLV3-9A0A075B6K5 115 aa10.26□□□□□ -0.77
SCN8A-209ENST00000627620 USF3Q68DE3 2245 aa10.26□□□□□ -0.77
SCN8A-209ENST00000627620 IGHV3-16A0A0C4DH30 117 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 RHODO00212 210 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 PAX9P55771 341 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 MST1LQ2TV78 715 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 F8WEM9 126 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 ZNF524Q96C55 264 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 ANAPC10Q9UM13 185 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 TP53TG1Q9Y2A0 90 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 PRSS46E5RG02 174 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 ZSWIM8A7E2V4 1837 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 F5H768 121 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.25□□□□□ -0.77
SCN8A-209ENST00000627620 HIST1H4AP62805 103 aaKnown RBP10.25□□□□□ -0.77
SCN8A-209ENST00000627620 C8orf86Q6ZUL3 223 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 LINC00311Q8N616 119 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 CYYR1Q96J86 154 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 DLX4Q92988 240 aaPredicted RBP10.25□□□□□ -0.77
SCN8A-209ENST00000627620 CHAC1Q9BUX1 264 aa10.25□□□□□ -0.77
SCN8A-209ENST00000627620 CDK2AP2O75956 126 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 IGKV1-39P01597 117 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 IGLV1-44P01699 117 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 IGKV1D-39P04432 117 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 KIR3DS1Q14943 382 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 C1orf122Q6ZSJ8 110 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 TRAV8-3A0A0A6YYJ7 113 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 DAD1P61803 113 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 NBASA2RRP1 2371 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 FAM231BA6NCW3 169 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 STPG4Q8N801 248 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 TPSG1Q9NRR2 321 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 FAM215AQ9Y5M1 114 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 C9JQL5 133 aa10.24□□□□□ -0.77
SCN8A-209ENST00000627620 NDUFA4O00483 81 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 TCTEX1D4Q5JR98 221 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 FAM104BQ5XKR9 115 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 WT1-ASQ06250 92 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 ZNF625Q96I27 306 aaPredicted RBP10.23□□□□□ -0.77
SCN8A-209ENST00000627620 FANCMQ8IYD8 2048 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 IGHV1OR15-1A0A075B7D0 117 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 C15orf65H3BRN8 121 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 OVOL2Q9BRP0 275 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 AZU1P20160 251 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 Q0VG73 95 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 GAGE2BQ13066 116 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 GAGE2EQ4V326 116 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 CT83Q5H943 113 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 GAGE2DQ9UEU5 116 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 C2orf66Q6UXQ4 117 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 DOCK7Q96N67 2140 aa10.23□□□□□ -0.77
SCN8A-209ENST00000627620 MMP23AO75900 390 aa10.22□□□□□ -0.77
SCN8A-209ENST00000627620 ZNF134P52741 427 aa10.22□□□□□ -0.77
SCN8A-209ENST00000627620 TRBV25-1A0A075B6N4 114 aa10.22□□□□□ -0.77
SCN8A-209ENST00000627620 I3L3M4 83 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms