RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	VGLL1	Q99990	258 aa		3.16	□□□□□ -1.9
LINC00649-219	ENST00000622171	NIPSNAP3B	Q9BS92	247 aa		3.16	□□□□□ -1.9
LINC00649-219	ENST00000622171	SLC25A2	Q9BXI2	301 aa		3.16	□□□□□ -1.9
LINC00649-219	ENST00000622171	NPCDR1	Q9BY65	106 aa		3.16	□□□□□ -1.9
LINC00649-219	ENST00000622171	NOP10	Q9NPE3	64 aa	Known RBP	3.16	□□□□□ -1.9
LINC00649-219	ENST00000622171	ZNF331	Q9NQX6	463 aa	Predicted RBP	3.16	□□□□□ -1.9
LINC00649-219	ENST00000622171	LYRM2	Q9NU23	88 aa	Predicted RBP	3.16	□□□□□ -1.9
LINC00649-219	ENST00000622171	SLC39A9	Q9NUM3	307 aa		3.16	□□□□□ -1.9
LINC00649-219	ENST00000622171	PTTG2	Q9NZH5	202 aa		3.16	□□□□□ -1.9
LINC00649-219	ENST00000622171	MBD2	Q9UBB5	411 aa		3.16	□□□□□ -1.9
LINC00649-219	ENST00000622171	PFDN2	Q9UHV9	154 aa		3.16	□□□□□ -1.9
LINC00649-219	ENST00000622171	WDR83OS	Q9Y284	106 aa		3.16	□□□□□ -1.9
LINC00649-219	ENST00000622171	ALG5	Q9Y673	324 aa		3.16	□□□□□ -1.9
LINC00649-219	ENST00000622171		A0A087X0K7	114 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171		A0A096LPF7	62 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	OR7C2	O60412	319 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	DUSP14	O95147	198 aa	Known RBP	3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	NDUFB4	O95168	129 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	AMBP	P02760	352 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	CT45A10	P0DMU9	189 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	IGLC2	P0DOY2	106 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	RNASE4	P34096	147 aa	Known RBP	3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	ATP5I	P56385	69 aa	Predicted RBP	3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	TAS2R30	P59541	319 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	RAB2A	P61019	212 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	SELENOT	P62341	195 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	GNG5	P63218	68 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	CD300C	Q08708	224 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	IL15RA	Q13261	267 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	OR5I1	Q13606	314 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	ICAM4	Q14773	271 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	FFAR4	Q5NUL3	377 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	MUC21	Q5SSG8	566 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	LCN15	Q6UWW0	184 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171		Q6ZTI0	123 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	BPIFA4P	Q86YQ2	179 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	OR10J6P	Q8NGY7	276 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	PPP1R1C	Q8WVI7	109 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	DEDD2	Q8WXF8	326 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	S100Z	Q8WXG8	99 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	HYLS1	Q96M11	299 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	LINC00477	Q96M19	166 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	NDUFAF3	Q9BU61	184 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	HRH4	Q9H3N8	390 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	TMPRSS5	Q9H3S3	457 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	WFDC1	Q9HC57	220 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	SEPSECS	Q9HD40	501 aa	Known RBP	3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	MRPL16	Q9NX20	251 aa	Known RBP	3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	NDUFA13	Q9P0J0	144 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	CACFD1	Q9UGQ2	172 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	NAGK	Q9UJ70	344 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	TP53TG3	Q9ULZ0	132 aa		3.15	□□□□□ -1.91
LINC00649-219	ENST00000622171	PIGBOS1	A0A0B4J2F0	54 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171		A8MTW9	85 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	C11orf94	C9JXX5	98 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171		F6UZH7	168 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	SMLR1	H3BR10	107 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	RTL8C	O15255	209 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	MPC2	O95563	127 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	CFD	P00746	253 aa	Predicted RBP	3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	HOXA5	P20719	270 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	PLP1	P60201	277 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	UBE2L3	P68036	154 aa	Known RBP	3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	HBG1	P69891	147 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	HBG2	P69892	147 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	TMEM41B	Q5BJD5	291 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171		Q5BKY6	102 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171		Q6ZRG5	221 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	ZNF575	Q86XF7	245 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	IQCF2	Q8IXL9	164 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	HSD17B11	Q8NBQ5	300 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	RNF141	Q8WVD5	230 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	SAT2	Q96F10	170 aa	Predicted RBP	3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	ZNF503	Q96F45	646 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	FAM167A-AS1	Q96KT0	104 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	GPR82	Q96P67	336 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	RNF126	Q9BV68	326 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	SH3BGRL3	Q9H299	93 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	DNAJC4	Q9NNZ3	241 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	GSN-AS1	Q9NRJ2	163 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	HSPB11	Q9Y547	144 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	TIMM9	Q9Y5J7	89 aa		3.14	□□□□□ -1.91
LINC00649-219	ENST00000622171	TRBV19	A0A075B6N1	114 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	TRAV26-1	A0A087WT03	109 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	TRGV1	A0A0A0MS02	117 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	TRAV8-1	A0A0A6YYK1	113 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	CBY3	A6NI87	242 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171		E5RGE8	158 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	NPIPB6	E9PJ23	425 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	SFTA3	P0C7M3	94 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	RPL12	P30050	165 aa	Known RBP	3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	S100A11	P31949	105 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	CDKN1B	P46527	198 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	RPL29	P47914	159 aa	Known RBP	3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	DEFA3	P59666	94 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	RAN	P62826	216 aa	Known RBP	3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	RAB31	Q13636	194 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	VWC2	Q2TAL6	325 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	SSX7	Q7RTT5	188 aa		3.13	□□□□□ -1.91
LINC00649-219	ENST00000622171	POM121L12	Q8N7R1	296 aa		3.13	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms