RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 M0R3E3 92 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 STAG3L2P0CL84 134 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 STAG3L3P0CL85 134 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 TAS2R45P59539 299 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 EBLN2Q6P2I7 272 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 MORN3Q6PF18 240 aaPredicted RBP10.44□□□□□ -0.74
CBWD3-217ENST00000621474 OR4B1Q8NGF8 309 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 OR8A1Q8NGG7 326 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 RPUSD4Q96CM3 377 aaKnown RBP10.44□□□□□ -0.74
CBWD3-217ENST00000621474 ZNF471Q9BX82 626 aaPredicted RBP10.44□□□□□ -0.74
CBWD3-217ENST00000621474 KANTRA0A1W2PQU2 76 aa10.43□□□□□ -0.74
CBWD3-217ENST00000621474 SPRY2O43597 315 aa10.43□□□□□ -0.74
CBWD3-217ENST00000621474 MBP02144 154 aa10.43□□□□□ -0.74
CBWD3-217ENST00000621474 UBE2L3P68036 154 aaKnown RBP10.43□□□□□ -0.74
CBWD3-217ENST00000621474 PQLC2Q6ZP29 291 aa10.43□□□□□ -0.74
CBWD3-217ENST00000621474 HYLS1Q96M11 299 aa10.43□□□□□ -0.74
CBWD3-217ENST00000621474 SLC35B3Q9H1N7 401 aa10.43□□□□□ -0.74
CBWD3-217ENST00000621474 EDA2RQ9HAV5 297 aa10.43□□□□□ -0.74
CBWD3-217ENST00000621474 CLEC5AQ9NY25 188 aa10.43□□□□□ -0.74
CBWD3-217ENST00000621474 ARL14EPLP0DKL9 152 aa10.42□□□□□ -0.74
CBWD3-217ENST00000621474 FXYD7P58549 80 aa10.42□□□□□ -0.74
CBWD3-217ENST00000621474 PSG9Q00887 426 aa10.41□□□□□ -0.74
CBWD3-217ENST00000621474 C9orf62Q8N4C0 152 aa10.41□□□□□ -0.74
CBWD3-217ENST00000621474 STOML3Q8TAV4 291 aa10.41□□□□□ -0.74
CBWD3-217ENST00000621474 MRPL53Q96EL3 112 aaKnown RBP10.41□□□□□ -0.74
CBWD3-217ENST00000621474 XCL2Q9UBD3 114 aa10.41□□□□□ -0.74
CBWD3-217ENST00000621474 PFDN1O60925 122 aa10.4□□□□□ -0.74
CBWD3-217ENST00000621474 SEC11BP0C7V7 166 aa10.4□□□□□ -0.74
CBWD3-217ENST00000621474 FHITP49789 147 aa10.4□□□□□ -0.74
CBWD3-217ENST00000621474 NUTF2P61970 127 aaKnown RBP10.4□□□□□ -0.74
CBWD3-217ENST00000621474 HIST1H1AQ02539 215 aaPredicted RBP10.4□□□□□ -0.74
CBWD3-217ENST00000621474 ICAM4Q14773 271 aa10.4□□□□□ -0.74
CBWD3-217ENST00000621474 SUN5Q8TC36 379 aa10.4□□□□□ -0.74
CBWD3-217ENST00000621474 CRXO43186 299 aaPredicted RBP10.4□□□□□ -0.75
CBWD3-217ENST00000621474 RANP62826 216 aaKnown RBP10.4□□□□□ -0.75
CBWD3-217ENST00000621474 AKR1C8PQ5T2L2 129 aa10.4□□□□□ -0.75
CBWD3-217ENST00000621474 BAP18Q8IXM2 172 aa10.4□□□□□ -0.75
CBWD3-217ENST00000621474 ACTR3CQ9C0K3 210 aaPredicted RBP10.4□□□□□ -0.75
CBWD3-217ENST00000621474 Q9H3A6 140 aa10.4□□□□□ -0.75
CBWD3-217ENST00000621474 CTXND1A0A1B0GTU2 59 aa10.39□□□□□ -0.75
CBWD3-217ENST00000621474 M0R2Z0 102 aa10.39□□□□□ -0.75
CBWD3-217ENST00000621474 DUSP14O95147 198 aaKnown RBP10.39□□□□□ -0.75
CBWD3-217ENST00000621474 ZFP69Q49AA0 526 aa10.39□□□□□ -0.75
CBWD3-217ENST00000621474 LYPD1Q8N2G4 141 aa10.39□□□□□ -0.75
CBWD3-217ENST00000621474 AAMDCQ9H7C9 122 aa10.39□□□□□ -0.75
CBWD3-217ENST00000621474 STARD9Q9P2P6 4700 aa10.38□□□□□ -0.75
CBWD3-217ENST00000621474 ZNF705EA8MWA4 302 aaPredicted RBP10.38□□□□□ -0.75
CBWD3-217ENST00000621474 NPIPB6E9PJ23 425 aa10.38□□□□□ -0.75
CBWD3-217ENST00000621474 GCHFRP30047 84 aa10.38□□□□□ -0.75
CBWD3-217ENST00000621474 SPINK13Q1W4C9 94 aa10.38□□□□□ -0.75
CBWD3-217ENST00000621474 ZNF705AQ6ZN79 300 aaPredicted RBP10.38□□□□□ -0.75
CBWD3-217ENST00000621474 OR11H2Q8NH07 326 aa10.38□□□□□ -0.75
CBWD3-217ENST00000621474 WWC2-AS2Q96NR7 200 aa10.38□□□□□ -0.75
CBWD3-217ENST00000621474 RARRES2Q99969 163 aa10.38□□□□□ -0.75
CBWD3-217ENST00000621474 PRELID1Q9Y255 219 aa10.38□□□□□ -0.75
CBWD3-217ENST00000621474 X6R8D5 127 aa10.38□□□□□ -0.75
CBWD3-217ENST00000621474 CXorf1O96002 111 aa10.37□□□□□ -0.75
CBWD3-217ENST00000621474 TPT1P13693 172 aaKnown RBP10.37□□□□□ -0.75
CBWD3-217ENST00000621474 NKX2-5P52952 324 aaPredicted RBP10.37□□□□□ -0.75
CBWD3-217ENST00000621474 TMED6Q8WW62 240 aa10.37□□□□□ -0.75
CBWD3-217ENST00000621474 C1QTNF4Q9BXJ3 329 aa10.37□□□□□ -0.75
CBWD3-217ENST00000621474 IGKV2-40A0A087WW87 121 aaPredicted RBP10.36□□□□□ -0.75
CBWD3-217ENST00000621474 IGKV2D-40P01614 121 aaPredicted RBP10.36□□□□□ -0.75
CBWD3-217ENST00000621474 RBMY1A1P0DJD3 496 aaKnown RBP10.36□□□□□ -0.75
CBWD3-217ENST00000621474 RBMY1CP0DJD4 496 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 FGF8P55075 233 aaPredicted RBP10.36□□□□□ -0.75
CBWD3-217ENST00000621474 ERCC8Q13216 396 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 KIR3DS1Q14943 382 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 RBMY1FQ15415 496 aaKnown RBP10.36□□□□□ -0.75
CBWD3-217ENST00000621474 C1orf158Q8N1D5 194 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 Q8NAQ8 132 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 OR10J6PQ8NGY7 276 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 TMPRSS5Q9H3S3 457 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 TRAV12-2A0A075B6T6 113 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 A0A0J9YWU9 116 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 BOLA2-SMG1P6H3BVE0 249 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 CT45A10P0DMU9 189 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 EIF5AP63241 154 aaKnown RBP10.36□□□□□ -0.75
CBWD3-217ENST00000621474 FAM19A4Q96LR4 140 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 VGLL1Q99990 258 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 AGPAT4-IT1Q9H0P7 198 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 OTORQ9NRC9 128 aa10.36□□□□□ -0.75
CBWD3-217ENST00000621474 UMAD1C9J7I0 102 aa10.35□□□□□ -0.75
CBWD3-217ENST00000621474 C9orf47Q6ZRZ4 202 aa10.35□□□□□ -0.75
CBWD3-217ENST00000621474 SLC51BQ86UW2 128 aa10.35□□□□□ -0.75
CBWD3-217ENST00000621474 IGF2BP2-AS1Q96M15 143 aa10.35□□□□□ -0.75
CBWD3-217ENST00000621474 MAP1LC3B2A6NCE7 125 aa10.34□□□□□ -0.75
CBWD3-217ENST00000621474 PGPA6NDG6 321 aa10.34□□□□□ -0.75
CBWD3-217ENST00000621474 GGTLC3B5MD39 225 aa10.34□□□□□ -0.75
CBWD3-217ENST00000621474 DIRC3C9JPN6 131 aa10.34□□□□□ -0.75
CBWD3-217ENST00000621474 CDKN1BP46527 198 aa10.34□□□□□ -0.75
CBWD3-217ENST00000621474 MAP1LC3BQ9GZQ8 125 aa10.34□□□□□ -0.75
CBWD3-217ENST00000621474 TMEM167BQ9NRX6 74 aa10.34□□□□□ -0.75
CBWD3-217ENST00000621474 FAM213BQ8TBF2 198 aa10.33□□□□□ -0.76
CBWD3-217ENST00000621474 MBD3L1Q8WWY6 194 aa10.33□□□□□ -0.76
CBWD3-217ENST00000621474 ODF3Q96PU9 254 aa10.33□□□□□ -0.76
CBWD3-217ENST00000621474 IGHV4-28A0A0C4DH34 117 aa10.33□□□□□ -0.76
CBWD3-217ENST00000621474 RBAKDNA6NC62 111 aa10.33□□□□□ -0.76
CBWD3-217ENST00000621474 DEFB4AO15263 64 aa10.33□□□□□ -0.76
CBWD3-217ENST00000621474 MIFP14174 115 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms